RNA–Protein interactions for RNA: ENST00000577442.5

CDK5RAP3-203, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 617 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-203ENST00000577442 PRKG1Q13976 671 aa15.35■□□□□ 0.05
CDK5RAP3-203ENST00000577442 RGMBQ6NW40 437 aa15.35■□□□□ 0.05
CDK5RAP3-203ENST00000577442 ZSCAN29Q8IWY8 852 aaPredicted RBP15.35■□□□□ 0.05
CDK5RAP3-203ENST00000577442 CCDC102AQ96A19 550 aa15.35■□□□□ 0.05
CDK5RAP3-203ENST00000577442 DDX4Q9NQI0 724 aaKnown RBP15.35■□□□□ 0.05
CDK5RAP3-203ENST00000577442 ATRNL1Q5VV63 1379 aa15.35■□□□□ 0.05
CDK5RAP3-203ENST00000577442 TCRBV5S4A2TA0A5A2 114 aa15.34■□□□□ 0.05
CDK5RAP3-203ENST00000577442 UBE2Q2LH0YL09 131 aa15.34■□□□□ 0.05
CDK5RAP3-203ENST00000577442 VEGFBP49765 207 aa15.34■□□□□ 0.05
CDK5RAP3-203ENST00000577442 ZNF157P51786 506 aaPredicted RBP15.34■□□□□ 0.05
CDK5RAP3-203ENST00000577442 CENPQQ7L2Z9 268 aaPredicted RBP15.34■□□□□ 0.05
CDK5RAP3-203ENST00000577442 CDAN1Q8IWY9 1227 aa15.34■□□□□ 0.05
CDK5RAP3-203ENST00000577442 CSRNP1Q96S65 589 aa15.34■□□□□ 0.05
CDK5RAP3-203ENST00000577442 FSD1Q9BTV5 496 aa15.34■□□□□ 0.05
CDK5RAP3-203ENST00000577442 ZNF341Q9BYN7 854 aa15.34■□□□□ 0.05
CDK5RAP3-203ENST00000577442 CRNKL1Q9BZJ0 848 aaKnown RBP15.34■□□□□ 0.05
CDK5RAP3-203ENST00000577442 OSBPL5Q9H0X9 879 aaPredicted RBP15.34■□□□□ 0.05
CDK5RAP3-203ENST00000577442 OSBPL3Q9H4L5 887 aa15.34■□□□□ 0.05
CDK5RAP3-203ENST00000577442 WDR33Q9C0J8 1336 aaKnown RBP15.34■□□□□ 0.05
CDK5RAP3-203ENST00000577442 MYH1P12882 1939 aa15.33■□□□□ 0.05
CDK5RAP3-203ENST00000577442 OTOFQ9HC10 1997 aa15.33■□□□□ 0.05
CDK5RAP3-203ENST00000577442 THSD7BQ9C0I4 1608 aa15.33■□□□□ 0.04
CDK5RAP3-203ENST00000577442 USP5P45974 858 aa15.33■□□□□ 0.04
CDK5RAP3-203ENST00000577442 DYNLL1P63167 89 aaKnown RBP15.33■□□□□ 0.04
CDK5RAP3-203ENST00000577442 NOGQ13253 232 aa15.33■□□□□ 0.04
CDK5RAP3-203ENST00000577442 LDLRAD1Q5T700 205 aa15.33■□□□□ 0.04
CDK5RAP3-203ENST00000577442 CYP4F22Q6NT55 531 aa15.33■□□□□ 0.04
CDK5RAP3-203ENST00000577442 MOB2Q70IA6 237 aa15.33■□□□□ 0.04
CDK5RAP3-203ENST00000577442 TICAM2Q86XR7 235 aa15.33■□□□□ 0.04
CDK5RAP3-203ENST00000577442 PLEKHM2Q8IWE5 1019 aa15.33■□□□□ 0.04
CDK5RAP3-203ENST00000577442 ANKRD13AQ8IZ07 590 aa15.33■□□□□ 0.04
CDK5RAP3-203ENST00000577442 TGFBRAP1Q8WUH2 860 aa15.33■□□□□ 0.04
CDK5RAP3-203ENST00000577442 EVI5LQ96CN4 794 aa15.33■□□□□ 0.04
CDK5RAP3-203ENST00000577442 RIOK1Q9BRS2 568 aaKnown RBP15.33■□□□□ 0.04
CDK5RAP3-203ENST00000577442 DHX36Q9H2U1 1008 aaKnown RBP15.33■□□□□ 0.04
CDK5RAP3-203ENST00000577442 FLT1P17948 1338 aa15.33■□□□□ 0.04
CDK5RAP3-203ENST00000577442 NAV1Q8NEY1 1877 aa15.33■□□□□ 0.04
CDK5RAP3-203ENST00000577442 RNF113AO15541 343 aaKnown RBP15.32■□□□□ 0.04
CDK5RAP3-203ENST00000577442 USP2O75604 605 aaPredicted RBP15.32■□□□□ 0.04
CDK5RAP3-203ENST00000577442 MBD4O95243 580 aa15.32■□□□□ 0.04
CDK5RAP3-203ENST00000577442 GRM1Q13255 1194 aa15.32■□□□□ 0.04
CDK5RAP3-203ENST00000577442 ERICH6BQ5W0A0 696 aa15.32■□□□□ 0.04
CDK5RAP3-203ENST00000577442 MAPKAPK5Q8IW41 473 aa15.32■□□□□ 0.04
CDK5RAP3-203ENST00000577442 APPBP2Q92624 585 aa15.32■□□□□ 0.04
CDK5RAP3-203ENST00000577442 AIDAQ96BJ3 306 aa15.32■□□□□ 0.04
CDK5RAP3-203ENST00000577442 CSADQ9Y600 493 aa15.32■□□□□ 0.04
CDK5RAP3-203ENST00000577442 HLA-DOAP06340 250 aa15.31■□□□□ 0.04
CDK5RAP3-203ENST00000577442 SLC10A3P09131 477 aa15.31■□□□□ 0.04
CDK5RAP3-203ENST00000577442 MAP3K9P80192 1104 aa15.31■□□□□ 0.04
CDK5RAP3-203ENST00000577442 RASAL3Q86YV0 1011 aa15.31■□□□□ 0.04
CDK5RAP3-203ENST00000577442 ZFPM1Q8IX07 1006 aa15.31■□□□□ 0.04
CDK5RAP3-203ENST00000577442 JMYQ8N9B5 988 aa15.31■□□□□ 0.04
CDK5RAP3-203ENST00000577442 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.31■□□□□ 0.04
CDK5RAP3-203ENST00000577442 CCDC136Q96JN2 1154 aa15.31■□□□□ 0.04
CDK5RAP3-203ENST00000577442 DDTLA6NHG4 134 aaPredicted RBP15.3■□□□□ 0.04
CDK5RAP3-203ENST00000577442 TRIM6-TRIM34B2RNG4 842 aa15.3■□□□□ 0.04
CDK5RAP3-203ENST00000577442 MAP2K2P36507 400 aa15.3■□□□□ 0.04
CDK5RAP3-203ENST00000577442 MIGA2Q7L4E1 593 aa15.3■□□□□ 0.04
CDK5RAP3-203ENST00000577442 SH3BP5LQ7L8J4 393 aa15.3■□□□□ 0.04
CDK5RAP3-203ENST00000577442 LCORLQ8N3X6 602 aa15.3■□□□□ 0.04
CDK5RAP3-203ENST00000577442 SLC10A4Q96EP9 437 aa15.3■□□□□ 0.04
CDK5RAP3-203ENST00000577442 DDRGK1Q96HY6 314 aa15.3■□□□□ 0.04
CDK5RAP3-203ENST00000577442 WRNIP1Q96S55 665 aa15.3■□□□□ 0.04
CDK5RAP3-203ENST00000577442 ARMT1Q9H993 441 aa15.3■□□□□ 0.04
CDK5RAP3-203ENST00000577442 FZD1Q9UP38 647 aa15.3■□□□□ 0.04
CDK5RAP3-203ENST00000577442 TBC1D12O60347 775 aa15.29■□□□□ 0.04
CDK5RAP3-203ENST00000577442 TRIM34Q9BYJ4 488 aa15.29■□□□□ 0.04
CDK5RAP3-203ENST00000577442 PI4KBQ9UBF8 816 aa15.29■□□□□ 0.04
CDK5RAP3-203ENST00000577442 HERC5Q9UII4 1024 aaKnown RBP15.29■□□□□ 0.04
CDK5RAP3-203ENST00000577442 DDX60LQ5H9U9 1706 aaKnown RBP15.29■□□□□ 0.04
CDK5RAP3-203ENST00000577442 PDE4AP27815 886 aa15.28■□□□□ 0.04
CDK5RAP3-203ENST00000577442 MAP3K10Q02779 954 aa15.28■□□□□ 0.04
CDK5RAP3-203ENST00000577442 VGLL4Q14135 290 aa15.28■□□□□ 0.04
CDK5RAP3-203ENST00000577442 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.28■□□□□ 0.04
CDK5RAP3-203ENST00000577442 TTC6Q86TZ1 520 aa15.28■□□□□ 0.04
CDK5RAP3-203ENST00000577442 AMOTL1Q8IY63 956 aa15.28■□□□□ 0.04
CDK5RAP3-203ENST00000577442 REM2Q8IYK8 340 aaPredicted RBP15.28■□□□□ 0.04
CDK5RAP3-203ENST00000577442 CLMNQ96JQ2 1002 aa15.28■□□□□ 0.04
CDK5RAP3-203ENST00000577442 PUS7LQ9H0K6 701 aaKnown RBP15.28■□□□□ 0.04
CDK5RAP3-203ENST00000577442 ATP8A2Q9NTI2 1148 aa15.28■□□□□ 0.04
CDK5RAP3-203ENST00000577442 ZNF112Q9UJU3 913 aa15.28■□□□□ 0.04
CDK5RAP3-203ENST00000577442 PCNTO95613 3336 aa15.28■□□□□ 0.04
CDK5RAP3-203ENST00000577442 FAM155AB1AL88 458 aaPredicted RBP15.27■□□□□ 0.04
CDK5RAP3-203ENST00000577442 AOC2O75106 756 aa15.27■□□□□ 0.04
CDK5RAP3-203ENST00000577442 ZBTB48P10074 688 aaPredicted RBP15.27■□□□□ 0.04
CDK5RAP3-203ENST00000577442 GNAT2P19087 354 aa15.27■□□□□ 0.04
CDK5RAP3-203ENST00000577442 MAP2K1Q02750 393 aaPredicted RBP15.27■□□□□ 0.04
CDK5RAP3-203ENST00000577442 SLFNL1Q499Z3 407 aa15.27■□□□□ 0.04
CDK5RAP3-203ENST00000577442 ZMYM1Q5SVZ6 1142 aa15.27■□□□□ 0.04
CDK5RAP3-203ENST00000577442 CRACR2BQ8N4Y2 399 aaPredicted RBP15.27■□□□□ 0.04
CDK5RAP3-203ENST00000577442 OSBP2Q969R2 916 aa15.27■□□□□ 0.04
CDK5RAP3-203ENST00000577442 RILPL2Q969X0 211 aa15.27■□□□□ 0.04
CDK5RAP3-203ENST00000577442 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.27■□□□□ 0.04
CDK5RAP3-203ENST00000577442 SAP30BPQ9UHR5 308 aaKnown RBP15.27■□□□□ 0.04
CDK5RAP3-203ENST00000577442 PALD1Q9ULE6 856 aa15.27■□□□□ 0.04
CDK5RAP3-203ENST00000577442 SLC4A4Q9Y6R1 1079 aa15.27■□□□□ 0.04
CDK5RAP3-203ENST00000577442 BAZ2AQ9UIF9 1905 aaKnown RBP15.27■□□□□ 0.03
CDK5RAP3-203ENST00000577442 SIPA1L1O43166 1804 aa15.27■□□□□ 0.03
CDK5RAP3-203ENST00000577442 GPAA1O43292 621 aa15.26■□□□□ 0.03
CDK5RAP3-203ENST00000577442 CHGBP05060 677 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms