RNA–Protein interactions for RNA: ENST00000574344.5

NPLOC4-216, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 4

Gene NPLOC4, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-216ENST00000574344 LRP2BPQ9P2M1 347 aa11.86□□□□□ -0.51
NPLOC4-216ENST00000574344 FPGT-TNNI3KV9GXZ4 949 aa11.86□□□□□ -0.51
NPLOC4-216ENST00000574344 MYH1P12882 1939 aa11.86□□□□□ -0.51
NPLOC4-216ENST00000574344 PHIPQ8WWQ0 1821 aa11.86□□□□□ -0.51
NPLOC4-216ENST00000574344 IRF6O14896 467 aa11.85□□□□□ -0.51
NPLOC4-216ENST00000574344 ENTPD3O75355 529 aa11.85□□□□□ -0.51
NPLOC4-216ENST00000574344 LDHCP07864 332 aa11.85□□□□□ -0.51
NPLOC4-216ENST00000574344 MS4A1P11836 297 aa11.85□□□□□ -0.51
NPLOC4-216ENST00000574344 PPIL2Q13356 520 aa11.85□□□□□ -0.51
NPLOC4-216ENST00000574344 TBC1D9Q6ZT07 1266 aa11.85□□□□□ -0.51
NPLOC4-216ENST00000574344 ZFPM1Q8IX07 1006 aa11.85□□□□□ -0.51
NPLOC4-216ENST00000574344 DBNDD2Q9BQY9 259 aa11.85□□□□□ -0.51
NPLOC4-216ENST00000574344 SNRKQ9NRH2 765 aa11.85□□□□□ -0.51
NPLOC4-216ENST00000574344 MGAMO43451 1857 aa11.85□□□□□ -0.51
NPLOC4-216ENST00000574344 RFX7Q2KHR2 1363 aa11.84□□□□□ -0.51
NPLOC4-216ENST00000574344 ZBTB7BO15156 539 aaPredicted RBP11.84□□□□□ -0.51
NPLOC4-216ENST00000574344 SP3Q02447 781 aa11.84□□□□□ -0.51
NPLOC4-216ENST00000574344 PPATQ06203 517 aa11.84□□□□□ -0.51
NPLOC4-216ENST00000574344 OTOP1Q7RTM1 612 aa11.84□□□□□ -0.51
NPLOC4-216ENST00000574344 FAM43AQ8N2R8 423 aa11.84□□□□□ -0.51
NPLOC4-216ENST00000574344 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.84□□□□□ -0.51
NPLOC4-216ENST00000574344 NSUN4Q96CB9 384 aaKnown RBP11.84□□□□□ -0.51
NPLOC4-216ENST00000574344 FAM163AQ96GL9 167 aaPredicted RBP11.84□□□□□ -0.51
NPLOC4-216ENST00000574344 IDI2Q9BXS1 227 aa11.84□□□□□ -0.51
NPLOC4-216ENST00000574344 GPR108Q9NPR9 543 aa11.84□□□□□ -0.51
NPLOC4-216ENST00000574344 DDX4Q9NQI0 724 aaKnown RBP11.84□□□□□ -0.51
NPLOC4-216ENST00000574344 RBBP6Q7Z6E9 1792 aaKnown RBP11.83□□□□□ -0.52
NPLOC4-216ENST00000574344 BTBD19C9JJ37 291 aa11.83□□□□□ -0.52
NPLOC4-216ENST00000574344 RGS19P49795 217 aa11.83□□□□□ -0.52
NPLOC4-216ENST00000574344 CEP85Q6P2H3 762 aa11.83□□□□□ -0.52
NPLOC4-216ENST00000574344 EFCC1Q9HA90 598 aa11.83□□□□□ -0.52
NPLOC4-216ENST00000574344 PICK1Q9NRD5 415 aa11.83□□□□□ -0.52
NPLOC4-216ENST00000574344 EXOC6BQ9Y2D4 811 aa11.83□□□□□ -0.52
NPLOC4-216ENST00000574344 SIPA1L1O43166 1804 aa11.83□□□□□ -0.52
NPLOC4-216ENST00000574344 GPR75-ASB3A0A0A6YYF3 556 aa11.82□□□□□ -0.52
NPLOC4-216ENST00000574344 DDTLA6NHG4 134 aaPredicted RBP11.82□□□□□ -0.52
NPLOC4-216ENST00000574344 KIF22Q14807 665 aa11.82□□□□□ -0.52
NPLOC4-216ENST00000574344 ARHGEF6Q15052 776 aa11.82□□□□□ -0.52
NPLOC4-216ENST00000574344 NOL9Q5SY16 702 aaKnown RBP11.82□□□□□ -0.52
NPLOC4-216ENST00000574344 NAA16Q6N069 864 aaPredicted RBP11.82□□□□□ -0.52
NPLOC4-216ENST00000574344 ERC1Q8IUD2 1116 aa11.82□□□□□ -0.52
NPLOC4-216ENST00000574344 TEX11Q8IYF3 940 aa11.82□□□□□ -0.52
NPLOC4-216ENST00000574344 CCDC8Q9H0W5 538 aaPredicted RBP11.82□□□□□ -0.52
NPLOC4-216ENST00000574344 BCL11AQ9H165 835 aa11.82□□□□□ -0.52
NPLOC4-216ENST00000574344 ZNF112Q9UJU3 913 aa11.82□□□□□ -0.52
NPLOC4-216ENST00000574344 HTTP42858 3142 aa11.82□□□□□ -0.52
NPLOC4-216ENST00000574344 NAV1Q8NEY1 1877 aa11.82□□□□□ -0.52
NPLOC4-216ENST00000574344 MYH7P12883 1935 aa11.82□□□□□ -0.52
NPLOC4-216ENST00000574344 ATRNL1Q5VV63 1379 aa11.81□□□□□ -0.52
NPLOC4-216ENST00000574344 CENPFP49454 3210 aa11.81□□□□□ -0.52
NPLOC4-216ENST00000574344 ECM2O94769 699 aaPredicted RBP11.81□□□□□ -0.52
NPLOC4-216ENST00000574344 BAG3O95817 575 aa11.81□□□□□ -0.52
NPLOC4-216ENST00000574344 RHBDL3P58872 404 aa11.81□□□□□ -0.52
NPLOC4-216ENST00000574344 SH3BP5LQ7L8J4 393 aa11.81□□□□□ -0.52
NPLOC4-216ENST00000574344 SCYL3Q8IZE3 742 aa11.81□□□□□ -0.52
NPLOC4-216ENST00000574344 ZNF384Q8TF68 577 aa11.81□□□□□ -0.52
NPLOC4-216ENST00000574344 ZCCHC17Q9NP64 241 aaKnown RBP11.81□□□□□ -0.52
NPLOC4-216ENST00000574344 PPP4R2Q9NY27 417 aa11.81□□□□□ -0.52
NPLOC4-216ENST00000574344 AATFQ9NY61 560 aaKnown RBP eCLIP11.81□□□□□ -0.52
NPLOC4-216ENST00000574344 TLR7Q9NYK1 1049 aaKnown RBP11.81□□□□□ -0.52
NPLOC4-216ENST00000574344 DBNLQ9UJU6 430 aaKnown RBP11.81□□□□□ -0.52
NPLOC4-216ENST00000574344 COG6Q9Y2V7 657 aa11.81□□□□□ -0.52
NPLOC4-216ENST00000574344 NOP58Q9Y2X3 529 aaKnown RBP11.81□□□□□ -0.52
NPLOC4-216ENST00000574344 MYH8P13535 1937 aa11.81□□□□□ -0.52
NPLOC4-216ENST00000574344 FAM196BA6NMK8 535 aa11.8□□□□□ -0.52
NPLOC4-216ENST00000574344 APBB1O00213 710 aa11.8□□□□□ -0.52
NPLOC4-216ENST00000574344 PDHXO00330 501 aa11.8□□□□□ -0.52
NPLOC4-216ENST00000574344 MAP4K4O95819 1239 aaPredicted RBP11.8□□□□□ -0.52
NPLOC4-216ENST00000574344 CYP2E1P05181 493 aaPredicted RBP11.8□□□□□ -0.52
NPLOC4-216ENST00000574344 PLCG2P16885 1265 aa11.8□□□□□ -0.52
NPLOC4-216ENST00000574344 ZAP70P43403 619 aa11.8□□□□□ -0.52
NPLOC4-216ENST00000574344 HSP90AB4PQ58FF6 505 aa11.8□□□□□ -0.52
NPLOC4-216ENST00000574344 AACSQ86V21 672 aa11.8□□□□□ -0.52
NPLOC4-216ENST00000574344 OSBPL5Q9H0X9 879 aaPredicted RBP11.8□□□□□ -0.52
NPLOC4-216ENST00000574344 XPO5Q9HAV4 1204 aaKnown RBP eCLIP11.8□□□□□ -0.52
NPLOC4-216ENST00000574344 RCAN3Q9UKA8 241 aa11.8□□□□□ -0.52
NPLOC4-216ENST00000574344 DDX19BQ9UMR2 479 aa11.8□□□□□ -0.52
NPLOC4-216ENST00000574344 KCNH4Q9UQ05 1017 aa11.8□□□□□ -0.52
NPLOC4-216ENST00000574344 PTPN22Q9Y2R2 807 aa11.8□□□□□ -0.52
NPLOC4-216ENST00000574344 COL2A1P02458 1487 aaPredicted RBP11.8□□□□□ -0.52
NPLOC4-216ENST00000574344 PDE4DIPQ5VU43 2346 aa11.8□□□□□ -0.52
NPLOC4-216ENST00000574344 LOC285556D6RIA3 1793 aa11.79□□□□□ -0.52
NPLOC4-216ENST00000574344 PHF20L1A8MW92 1017 aa11.79□□□□□ -0.52
NPLOC4-216ENST00000574344 TLR2O60603 784 aa11.79□□□□□ -0.52
NPLOC4-216ENST00000574344 HMMRO75330 724 aa11.79□□□□□ -0.52
NPLOC4-216ENST00000574344 IDH1O75874 414 aaKnown RBP11.79□□□□□ -0.52
NPLOC4-216ENST00000574344 SLURP2P0DP57 97 aa11.79□□□□□ -0.52
NPLOC4-216ENST00000574344 PTPRAP18433 802 aa11.79□□□□□ -0.52
NPLOC4-216ENST00000574344 GADL1Q6ZQY3 521 aa11.79□□□□□ -0.52
NPLOC4-216ENST00000574344 ANKRD23Q86SG2 305 aa11.79□□□□□ -0.52
NPLOC4-216ENST00000574344 SH3RF3Q8TEJ3 882 aaPredicted RBP11.79□□□□□ -0.52
NPLOC4-216ENST00000574344 EAF2Q96CJ1 260 aaPredicted RBP11.79□□□□□ -0.52
NPLOC4-216ENST00000574344 TRIM34Q9BYJ4 488 aa11.79□□□□□ -0.52
NPLOC4-216ENST00000574344 IL1RAPL2Q9NP60 686 aa11.79□□□□□ -0.52
NPLOC4-216ENST00000574344 ZHX2Q9Y6X8 837 aa11.79□□□□□ -0.52
NPLOC4-216ENST00000574344 TRIM75PA6NK02 468 aa11.78□□□□□ -0.52
NPLOC4-216ENST00000574344 CXCL11O14625 94 aa11.78□□□□□ -0.52
NPLOC4-216ENST00000574344 CTNND1O60716 968 aaKnown RBP11.78□□□□□ -0.52
NPLOC4-216ENST00000574344 NPM3O75607 178 aaKnown RBP11.78□□□□□ -0.52
NPLOC4-216ENST00000574344 MAPKAPK5Q8IW41 473 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 168.5 ms