RNA–Protein interactions for RNA: ENST00000569062.1

ABCA3-206, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 5

Gene ABCA3, Length 900 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-206ENST00000569062 CFHR5Q9BXR6 569 aa24.68■■□□□ 1.54
ABCA3-206ENST00000569062 APBB1O00213 710 aa24.67■■□□□ 1.54
ABCA3-206ENST00000569062 HMMRO75330 724 aa24.67■■□□□ 1.54
ABCA3-206ENST00000569062 ALDH1A1P00352 501 aa24.67■■□□□ 1.54
ABCA3-206ENST00000569062 INPP5BP32019 993 aa24.67■■□□□ 1.54
ABCA3-206ENST00000569062 ZNF296Q8WUU4 475 aaPredicted RBP24.67■■□□□ 1.54
ABCA3-206ENST00000569062 TESPA1A2RU30 521 aaPredicted RBP24.66■■□□□ 1.54
ABCA3-206ENST00000569062 SPDYE5A6NIY4 337 aa24.66■■□□□ 1.54
ABCA3-206ENST00000569062 GPR25O00155 361 aa24.66■■□□□ 1.54
ABCA3-206ENST00000569062 ZNF112Q9UJU3 913 aa24.66■■□□□ 1.54
ABCA3-206ENST00000569062 ATRNL1Q5VV63 1379 aa24.66■■□□□ 1.54
ABCA3-206ENST00000569062 DDTLA6NHG4 134 aaPredicted RBP24.65■■□□□ 1.54
ABCA3-206ENST00000569062 NAA16Q6N069 864 aaPredicted RBP24.65■■□□□ 1.54
ABCA3-206ENST00000569062 ERO1BQ86YB8 467 aa24.65■■□□□ 1.54
ABCA3-206ENST00000569062 ZSCAN29Q8IWY8 852 aaPredicted RBP24.65■■□□□ 1.54
ABCA3-206ENST00000569062 CDK5RAP2Q96SN8 1893 aa24.65■■□□□ 1.54
ABCA3-206ENST00000569062 PIH1D3Q9NQM4 214 aaKnown RBP24.65■■□□□ 1.54
ABCA3-206ENST00000569062 NDUFB9Q9Y6M9 179 aa24.65■■□□□ 1.54
ABCA3-206ENST00000569062 SLURP2P0DP57 97 aa24.64■■□□□ 1.54
ABCA3-206ENST00000569062 KIF1BPQ96EK5 621 aa24.64■■□□□ 1.54
ABCA3-206ENST00000569062 YTHDC1Q96MU7 727 aaKnown RBP24.64■■□□□ 1.54
ABCA3-206ENST00000569062 GTF2A2P52657 109 aa24.63■■□□□ 1.53
ABCA3-206ENST00000569062 NOM1Q5C9Z4 860 aaKnown RBP24.63■■□□□ 1.53
ABCA3-206ENST00000569062 ADGRA1Q86SQ6 560 aa24.63■■□□□ 1.53
ABCA3-206ENST00000569062 BRI3BPQ8WY22 251 aa24.63■■□□□ 1.53
ABCA3-206ENST00000569062 CCL15-CCL14A0A0B4J2E2 113 aa24.62■■□□□ 1.53
ABCA3-206ENST00000569062 IRF6O14896 467 aa24.62■■□□□ 1.53
ABCA3-206ENST00000569062 CCL15Q16663 113 aa24.62■■□□□ 1.53
ABCA3-206ENST00000569062 OTUD7BQ6GQQ9 843 aa24.62■■□□□ 1.53
ABCA3-206ENST00000569062 SH3RF3Q8TEJ3 882 aaPredicted RBP24.62■■□□□ 1.53
ABCA3-206ENST00000569062 BCL11AQ9H165 835 aa24.62■■□□□ 1.53
ABCA3-206ENST00000569062 AATFQ9NY61 560 aaKnown RBP eCLIP24.62■■□□□ 1.53
ABCA3-206ENST00000569062 FOCADQ5VW36 1801 aa24.61■■□□□ 1.53
ABCA3-206ENST00000569062 MAP4K4O95819 1239 aaPredicted RBP24.61■■□□□ 1.53
ABCA3-206ENST00000569062 CTU1Q7Z7A3 348 aaKnown RBP24.61■■□□□ 1.53
ABCA3-206ENST00000569062 CLASRPQ8N2M8 674 aaKnown RBP24.61■■□□□ 1.53
ABCA3-206ENST00000569062 ANTXR1Q9H6X2 564 aa24.61■■□□□ 1.53
ABCA3-206ENST00000569062 PHF20L1A8MW92 1017 aa24.6■■□□□ 1.53
ABCA3-206ENST00000569062 RAB11FIP3O75154 756 aa24.6■■□□□ 1.53
ABCA3-206ENST00000569062 NPM3O75607 178 aaKnown RBP24.6■■□□□ 1.53
ABCA3-206ENST00000569062 MAP3K10Q02779 954 aa24.6■■□□□ 1.53
ABCA3-206ENST00000569062 PPATQ06203 517 aa24.6■■□□□ 1.53
ABCA3-206ENST00000569062 CRHR2Q13324 411 aa24.6■■□□□ 1.53
ABCA3-206ENST00000569062 PPIL2Q13356 520 aa24.6■■□□□ 1.53
ABCA3-206ENST00000569062 TEX11Q8IYF3 940 aa24.6■■□□□ 1.53
ABCA3-206ENST00000569062 NOL10Q9BSC4 688 aaKnown RBP24.6■■□□□ 1.53
ABCA3-206ENST00000569062 FKTNO75072 461 aa24.59■■□□□ 1.53
ABCA3-206ENST00000569062 NOL9Q5SY16 702 aaKnown RBP24.59■■□□□ 1.53
ABCA3-206ENST00000569062 FAM43AQ8N2R8 423 aa24.59■■□□□ 1.53
ABCA3-206ENST00000569062 OSBPL5Q9H0X9 879 aaPredicted RBP24.59■■□□□ 1.53
ABCA3-206ENST00000569062 DOCK1Q14185 1865 aa24.58■■□□□ 1.53
ABCA3-206ENST00000569062 CCDC85CA6NKD9 419 aa24.58■■□□□ 1.53
ABCA3-206ENST00000569062 IDH1O75874 414 aaKnown RBP24.58■■□□□ 1.53
ABCA3-206ENST00000569062 BAG3O95817 575 aa24.58■■□□□ 1.53
ABCA3-206ENST00000569062 PPP4CP60510 307 aa24.58■■□□□ 1.53
ABCA3-206ENST00000569062 SIPA1L1O43166 1804 aa24.57■■□□□ 1.52
ABCA3-206ENST00000569062 IFIT2P09913 472 aaKnown RBP24.57■■□□□ 1.52
ABCA3-206ENST00000569062 CETPP11597 493 aa24.57■■□□□ 1.52
ABCA3-206ENST00000569062 SNAPC2Q13487 334 aa24.57■■□□□ 1.52
ABCA3-206ENST00000569062 COL2A1P02458 1487 aaPredicted RBP24.57■■□□□ 1.52
ABCA3-206ENST00000569062 FAM196BA6NMK8 535 aa24.56■■□□□ 1.52
ABCA3-206ENST00000569062 IGSF3O75054 1194 aa24.56■■□□□ 1.52
ABCA3-206ENST00000569062 CYP7A1P22680 504 aa24.56■■□□□ 1.52
ABCA3-206ENST00000569062 DYNLL1P63167 89 aaKnown RBP24.56■■□□□ 1.52
ABCA3-206ENST00000569062 PHIPQ8WWQ0 1821 aa24.56■■□□□ 1.52
ABCA3-206ENST00000569062 PLCG2P16885 1265 aa24.55■■□□□ 1.52
ABCA3-206ENST00000569062 SCYL3Q8IZE3 742 aa24.55■■□□□ 1.52
ABCA3-206ENST00000569062 MAGEB6Q8N7X4 407 aa24.55■■□□□ 1.52
ABCA3-206ENST00000569062 TGFBRAP1Q8WUH2 860 aa24.55■■□□□ 1.52
ABCA3-206ENST00000569062 ATAD5Q96QE3 1844 aa24.54■■□□□ 1.52
ABCA3-206ENST00000569062 BTBD19C9JJ37 291 aa24.54■■□□□ 1.52
ABCA3-206ENST00000569062 TBC1D12O60347 775 aa24.54■■□□□ 1.52
ABCA3-206ENST00000569062 RRP1P56182 461 aaKnown RBP24.54■■□□□ 1.52
ABCA3-206ENST00000569062 TAF1CQ15572 869 aaPredicted RBP24.54■■□□□ 1.52
ABCA3-206ENST00000569062 MAPKAPK5Q8IW41 473 aa24.54■■□□□ 1.52
ABCA3-206ENST00000569062 KCNH4Q9UQ05 1017 aa24.54■■□□□ 1.52
ABCA3-206ENST00000569062 MAP3K12Q12852 859 aa24.53■■□□□ 1.52
ABCA3-206ENST00000569062 MIGA1Q8NAN2 632 aa24.53■■□□□ 1.52
ABCA3-206ENST00000569062 PPIL4Q8WUA2 492 aaKnown RBP eCLIP24.53■■□□□ 1.52
ABCA3-206ENST00000569062 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.53■■□□□ 1.52
ABCA3-206ENST00000569062 FRMD4AQ9P2Q2 1039 aaPredicted RBP24.53■■□□□ 1.52
ABCA3-206ENST00000569062 SMARCA5O60264 1052 aaPredicted RBP24.52■■□□□ 1.52
ABCA3-206ENST00000569062 CTNND1O60716 968 aaKnown RBP24.52■■□□□ 1.52
ABCA3-206ENST00000569062 PTPRAP18433 802 aa24.52■■□□□ 1.52
ABCA3-206ENST00000569062 DNAJC2Q99543 621 aaKnown RBP24.52■■□□□ 1.52
ABCA3-206ENST00000569062 LRRCC1Q9C099 1032 aa24.52■■□□□ 1.52
ABCA3-206ENST00000569062 ZFYVE28Q9HCC9 887 aa24.52■■□□□ 1.52
ABCA3-206ENST00000569062 PICK1Q9NRD5 415 aa24.52■■□□□ 1.52
ABCA3-206ENST00000569062 ZHX2Q9Y6X8 837 aa24.52■■□□□ 1.52
ABCA3-206ENST00000569062 PTPRFP10586 1907 aa24.52■■□□□ 1.52
ABCA3-206ENST00000569062 FLT1P17948 1338 aa24.52■■□□□ 1.52
ABCA3-206ENST00000569062 MYH1P12882 1939 aa24.51■■□□□ 1.51
ABCA3-206ENST00000569062 GOLIM4O00461 696 aa24.5■■□□□ 1.51
ABCA3-206ENST00000569062 MOGSQ13724 837 aa24.5■■□□□ 1.51
ABCA3-206ENST00000569062 TTF1Q15361 905 aaPredicted RBP24.5■■□□□ 1.51
ABCA3-206ENST00000569062 PKN2Q16513 984 aaKnown RBP24.5■■□□□ 1.51
ABCA3-206ENST00000569062 CD99L2Q8TCZ2 262 aa24.5■■□□□ 1.51
ABCA3-206ENST00000569062 EDC3Q96F86 508 aaKnown RBP24.5■■□□□ 1.51
ABCA3-206ENST00000569062 CAP1Q01518 475 aa24.49■■□□□ 1.51
ABCA3-206ENST00000569062 SP3Q02447 781 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 2791.2 ms