RNA–Protein interactions for RNA: ENST00000566612.5

CDH1-210, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 4,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-210ENST00000566612 RFX5P48382 616 aaPredicted RBP13.24□□□□□ -0.29
CDH1-210ENST00000566612 FANCCQ00597 558 aa13.24□□□□□ -0.29
CDH1-210ENST00000566612 UBE3CQ15386 1083 aa13.24□□□□□ -0.29
CDH1-210ENST00000566612 KIF4BQ2VIQ3 1234 aa13.24□□□□□ -0.29
CDH1-210ENST00000566612 XPO4Q9C0E2 1151 aaKnown RBP13.24□□□□□ -0.29
CDH1-210ENST00000566612 DEF6Q9H4E7 631 aa13.24□□□□□ -0.29
CDH1-210ENST00000566612 CASQ1P31415 396 aa13.24□□□□□ -0.29
CDH1-210ENST00000566612 CCDC96Q2M329 555 aa13.24□□□□□ -0.29
CDH1-210ENST00000566612 FAM182BQ5T319 152 aa13.24□□□□□ -0.29
CDH1-210ENST00000566612 SAP30BPQ9UHR5 308 aaKnown RBP13.24□□□□□ -0.29
CDH1-210ENST00000566612 DENND2AQ9ULE3 1009 aa13.24□□□□□ -0.29
CDH1-210ENST00000566612 IL6STP40189 918 aaPredicted RBP13.24□□□□□ -0.29
CDH1-210ENST00000566612 PICALMQ13492 652 aa13.24□□□□□ -0.29
CDH1-210ENST00000566612 ZNF654Q8IZM8 581 aa13.24□□□□□ -0.29
CDH1-210ENST00000566612 PDLIM2Q96JY6 352 aa13.24□□□□□ -0.29
CDH1-210ENST00000566612 PRKCSHP14314 528 aaPredicted RBP13.23□□□□□ -0.29
CDH1-210ENST00000566612 PPARAQ07869 468 aa13.23□□□□□ -0.29
CDH1-210ENST00000566612 SUSD4Q5VX71 490 aa13.23□□□□□ -0.29
CDH1-210ENST00000566612 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.23□□□□□ -0.29
CDH1-210ENST00000566612 TRMT44Q8IYL2 757 aaKnown RBP13.23□□□□□ -0.29
CDH1-210ENST00000566612 MAPK8IP1Q9UQF2 711 aa13.23□□□□□ -0.29
CDH1-210ENST00000566612 LDHBP07195 334 aaKnown RBP13.23□□□□□ -0.29
CDH1-210ENST00000566612 CRACR2BQ8N4Y2 399 aaPredicted RBP13.23□□□□□ -0.29
CDH1-210ENST00000566612 TCP11L1Q9NUJ3 509 aa13.23□□□□□ -0.29
CDH1-210ENST00000566612 PTPN21Q16825 1174 aa13.23□□□□□ -0.29
CDH1-210ENST00000566612 ZNF827Q17R98 1081 aa13.23□□□□□ -0.29
CDH1-210ENST00000566612 MYRIPQ8NFW9 859 aa13.23□□□□□ -0.29
CDH1-210ENST00000566612 ZSWIM5Q9P217 1185 aa13.23□□□□□ -0.29
CDH1-210ENST00000566612 ZNF609O15014 1411 aa13.22□□□□□ -0.29
CDH1-210ENST00000566612 RTL9Q8NET4 1388 aa13.22□□□□□ -0.29
CDH1-210ENST00000566612 NLRP12P59046 1061 aa13.22□□□□□ -0.29
CDH1-210ENST00000566612 RASGRF1Q13972 1273 aa13.22□□□□□ -0.29
CDH1-210ENST00000566612 PIK3AP1Q6ZUJ8 805 aa13.22□□□□□ -0.29
CDH1-210ENST00000566612 RTEL1Q9NZ71 1219 aa13.22□□□□□ -0.29
CDH1-210ENST00000566612 PXDNQ92626 1479 aa13.22□□□□□ -0.29
CDH1-210ENST00000566612 ZMYM6O95789 1325 aa13.22□□□□□ -0.29
CDH1-210ENST00000566612 PXDNLA1KZ92 1463 aa13.22□□□□□ -0.29
CDH1-210ENST00000566612 CUTAO60888 179 aa13.22□□□□□ -0.29
CDH1-210ENST00000566612 RPS8P62241 208 aaKnown RBP13.22□□□□□ -0.29
CDH1-210ENST00000566612 DPCR1Q3MIW9 517 aa13.22□□□□□ -0.29
CDH1-210ENST00000566612 ISCA1Q9BUE6 129 aa13.22□□□□□ -0.29
CDH1-210ENST00000566612 NYXQ9GZU5 481 aa13.22□□□□□ -0.29
CDH1-210ENST00000566612 KIF5CO60282 957 aa13.22□□□□□ -0.29
CDH1-210ENST00000566612 TOM1O60784 492 aa13.22□□□□□ -0.29
CDH1-210ENST00000566612 IGSF3O75054 1194 aa13.22□□□□□ -0.29
CDH1-210ENST00000566612 STAT6P42226 847 aa13.22□□□□□ -0.29
CDH1-210ENST00000566612 HSP90B2PQ58FF3 399 aa13.22□□□□□ -0.29
CDH1-210ENST00000566612 FANCBQ8NB91 859 aa13.22□□□□□ -0.29
CDH1-210ENST00000566612 LINC00301Q8NCQ3 95 aa13.22□□□□□ -0.29
CDH1-210ENST00000566612 CCNL1Q9UK58 526 aaPredicted RBP13.22□□□□□ -0.29
CDH1-210ENST00000566612 TNKSO95271 1327 aa13.21□□□□□ -0.29
CDH1-210ENST00000566612 NOM1Q5C9Z4 860 aaKnown RBP13.21□□□□□ -0.29
CDH1-210ENST00000566612 TMCO3Q6UWJ1 677 aa13.21□□□□□ -0.29
CDH1-210ENST00000566612 KIAA1328Q86T90 577 aa13.21□□□□□ -0.29
CDH1-210ENST00000566612 KLHL34Q8N239 644 aa13.21□□□□□ -0.29
CDH1-210ENST00000566612 LCORLQ8N3X6 602 aa13.21□□□□□ -0.29
CDH1-210ENST00000566612 TCEAL9Q9UHQ7 104 aa13.21□□□□□ -0.29
CDH1-210ENST00000566612 KARSQ15046 597 aaKnown RBP13.21□□□□□ -0.29
CDH1-210ENST00000566612 NOSTRINQ8IVI9 506 aa13.21□□□□□ -0.29
CDH1-210ENST00000566612 CCDC12Q8WUD4 166 aaPredicted RBP13.21□□□□□ -0.29
CDH1-210ENST00000566612 TNS3Q68CZ2 1445 aa13.21□□□□□ -0.3
CDH1-210ENST00000566612 CYP2D7A0A087X1C5 515 aa13.21□□□□□ -0.3
CDH1-210ENST00000566612 RIMBP2O15034 1052 aa13.21□□□□□ -0.3
CDH1-210ENST00000566612 CALM1P0DP23 149 aa13.21□□□□□ -0.3
CDH1-210ENST00000566612 CALM2P0DP24 149 aa13.21□□□□□ -0.3
CDH1-210ENST00000566612 CALM3P0DP25 149 aa13.21□□□□□ -0.3
CDH1-210ENST00000566612 ENOX2Q16206 610 aaKnown RBP13.21□□□□□ -0.3
CDH1-210ENST00000566612 SERTAD1Q9UHV2 236 aa13.21□□□□□ -0.3
CDH1-210ENST00000566612 NFE2L3Q9Y4A8 694 aa13.21□□□□□ -0.3
CDH1-210ENST00000566612 CTDP1Q9Y5B0 961 aaPredicted RBP13.21□□□□□ -0.3
CDH1-210ENST00000566612 UTYO14607 1347 aa13.21□□□□□ -0.3
CDH1-210ENST00000566612 CMA1P23946 247 aa13.2□□□□□ -0.3
CDH1-210ENST00000566612 NAPAP54920 295 aa13.2□□□□□ -0.3
CDH1-210ENST00000566612 KIF23Q02241 960 aaPredicted RBP13.2□□□□□ -0.3
CDH1-210ENST00000566612 CACTINQ8WUQ7 758 aaKnown RBP13.2□□□□□ -0.3
CDH1-210ENST00000566612 CDCA7Q9BWT1 371 aaPredicted RBP13.2□□□□□ -0.3
CDH1-210ENST00000566612 BMP2KQ9NSY1 1161 aaPredicted RBP13.2□□□□□ -0.3
CDH1-210ENST00000566612 CGNQ9P2M7 1197 aaKnown RBP13.2□□□□□ -0.3
CDH1-210ENST00000566612 DYNLL1P63167 89 aaKnown RBP13.2□□□□□ -0.3
CDH1-210ENST00000566612 SKIDA1Q1XH10 827 aa13.2□□□□□ -0.3
CDH1-210ENST00000566612 TRIM47Q96LD4 638 aa13.2□□□□□ -0.3
CDH1-210ENST00000566612 REREQ9P2R6 1566 aa13.2□□□□□ -0.3
CDH1-210ENST00000566612 MTIF2P46199 727 aaKnown RBP13.2□□□□□ -0.3
CDH1-210ENST00000566612 TBC1D10CQ8IV04 446 aa13.2□□□□□ -0.3
CDH1-210ENST00000566612 TDRD7Q8NHU6 1098 aaKnown RBP13.2□□□□□ -0.3
CDH1-210ENST00000566612 BMP15O95972 392 aa13.2□□□□□ -0.3
CDH1-210ENST00000566612 CCT6AP40227 531 aaKnown RBP13.2□□□□□ -0.3
CDH1-210ENST00000566612 TSGA10IPQ3SY00 556 aa13.2□□□□□ -0.3
CDH1-210ENST00000566612 CCDC43Q96MW1 224 aaKnown RBP13.2□□□□□ -0.3
CDH1-210ENST00000566612 ANKRD2Q9GZV1 360 aa13.2□□□□□ -0.3
CDH1-210ENST00000566612 LZTFL1Q9NQ48 299 aa13.2□□□□□ -0.3
CDH1-210ENST00000566612 NR5A1Q13285 461 aa13.19□□□□□ -0.3
CDH1-210ENST00000566612 CCDC178Q5BJE1 867 aa13.19□□□□□ -0.3
CDH1-210ENST00000566612 STRBPQ96SI9 672 aaKnown RBP13.19□□□□□ -0.3
CDH1-210ENST00000566612 MED23Q9ULK4 1368 aa13.19□□□□□ -0.3
CDH1-210ENST00000566612 SLU7O95391 586 aaKnown RBP13.19□□□□□ -0.3
CDH1-210ENST00000566612 ARID5BQ14865 1188 aa13.19□□□□□ -0.3
CDH1-210ENST00000566612 SLC39A14Q15043 492 aa13.19□□□□□ -0.3
CDH1-210ENST00000566612 ERICH4A6NGS2 130 aa13.19□□□□□ -0.3
CDH1-210ENST00000566612 POSTNQ15063 836 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms