RNA–Protein interactions for RNA: ENST00000564642.1

SYNGR3-204, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-204ENST00000564642 RGS19P49795 217 aa22.38■■□□□ 1.17
SYNGR3-204ENST00000564642 RHBDL3P58872 404 aa22.38■■□□□ 1.17
SYNGR3-204ENST00000564642 IDH1O75874 414 aaKnown RBP22.37■■□□□ 1.17
SYNGR3-204ENST00000564642 GJA5P36382 358 aa22.37■■□□□ 1.17
SYNGR3-204ENST00000564642 ZKSCAN4Q969J2 545 aaPredicted RBP22.37■■□□□ 1.17
SYNGR3-204ENST00000564642 LRRCC1Q9C099 1032 aa22.37■■□□□ 1.17
SYNGR3-204ENST00000564642 DDX4Q9NQI0 724 aaKnown RBP22.37■■□□□ 1.17
SYNGR3-204ENST00000564642 DOCK2Q92608 1830 aa22.36■■□□□ 1.17
SYNGR3-204ENST00000564642 PLCG2P16885 1265 aa22.36■■□□□ 1.17
SYNGR3-204ENST00000564642 AATFQ9NY61 560 aaKnown RBP eCLIP22.36■■□□□ 1.17
SYNGR3-204ENST00000564642 NDUFB9Q9Y6M9 179 aa22.36■■□□□ 1.17
SYNGR3-204ENST00000564642 LAMB1P07942 1786 aa22.35■■□□□ 1.17
SYNGR3-204ENST00000564642 CCDC85CA6NKD9 419 aa22.35■■□□□ 1.17
SYNGR3-204ENST00000564642 NPM3O75607 178 aaKnown RBP22.35■■□□□ 1.17
SYNGR3-204ENST00000564642 TBC1D8O95759 1140 aa22.35■■□□□ 1.17
SYNGR3-204ENST00000564642 ALDH1A1P00352 501 aa22.35■■□□□ 1.17
SYNGR3-204ENST00000564642 MAP3K12Q12852 859 aa22.35■■□□□ 1.17
SYNGR3-204ENST00000564642 TTF1Q15361 905 aaPredicted RBP22.35■■□□□ 1.17
SYNGR3-204ENST00000564642 OTUD7BQ6GQQ9 843 aa22.35■■□□□ 1.17
SYNGR3-204ENST00000564642 ERO1BQ86YB8 467 aa22.35■■□□□ 1.17
SYNGR3-204ENST00000564642 IFNL1Q8IU54 200 aa22.35■■□□□ 1.17
SYNGR3-204ENST00000564642 TEX11Q8IYF3 940 aa22.35■■□□□ 1.17
SYNGR3-204ENST00000564642 OTUD5Q96G74 571 aa22.35■■□□□ 1.17
SYNGR3-204ENST00000564642 RFX7Q2KHR2 1363 aa22.35■■□□□ 1.17
SYNGR3-204ENST00000564642 DDTLA6NHG4 134 aaPredicted RBP22.34■■□□□ 1.17
SYNGR3-204ENST00000564642 CYP7A1P22680 504 aa22.34■■□□□ 1.17
SYNGR3-204ENST00000564642 INPP5BP32019 993 aa22.34■■□□□ 1.17
SYNGR3-204ENST00000564642 SH3RF3Q8TEJ3 882 aaPredicted RBP22.34■■□□□ 1.17
SYNGR3-204ENST00000564642 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.34■■□□□ 1.17
SYNGR3-204ENST00000564642 CNKSR2Q8WXI2 1034 aa22.34■■□□□ 1.17
SYNGR3-204ENST00000564642 ANTXR1Q9H6X2 564 aa22.34■■□□□ 1.17
SYNGR3-204ENST00000564642 ZNF112Q9UJU3 913 aa22.34■■□□□ 1.17
SYNGR3-204ENST00000564642 SNCAIPQ9Y6H5 919 aa22.34■■□□□ 1.17
SYNGR3-204ENST00000564642 SPDYE5A6NIY4 337 aa22.33■■□□□ 1.17
SYNGR3-204ENST00000564642 GTF2A2P52657 109 aa22.33■■□□□ 1.17
SYNGR3-204ENST00000564642 PPP4CP60510 307 aa22.33■■□□□ 1.17
SYNGR3-204ENST00000564642 SH3BP5LQ7L8J4 393 aa22.33■■□□□ 1.17
SYNGR3-204ENST00000564642 DCTPP1Q9H773 170 aa22.33■■□□□ 1.17
SYNGR3-204ENST00000564642 SMARCA5O60264 1052 aaPredicted RBP22.32■■□□□ 1.16
SYNGR3-204ENST00000564642 ADGRA1Q86SQ6 560 aa22.32■■□□□ 1.16
SYNGR3-204ENST00000564642 MAGEB6Q8N7X4 407 aa22.32■■□□□ 1.16
SYNGR3-204ENST00000564642 CRBNQ96SW2 442 aa22.32■■□□□ 1.16
SYNGR3-204ENST00000564642 DNAJC2Q99543 621 aaKnown RBP22.32■■□□□ 1.16
SYNGR3-204ENST00000564642 OSBPL5Q9H0X9 879 aaPredicted RBP22.32■■□□□ 1.16
SYNGR3-204ENST00000564642 TMED8Q6PL24 325 aaPredicted RBP22.31■■□□□ 1.16
SYNGR3-204ENST00000564642 MS4A4AQ96JQ5 239 aa22.31■■□□□ 1.16
SYNGR3-204ENST00000564642 PCDHB15Q9Y5E8 787 aa22.31■■□□□ 1.16
SYNGR3-204ENST00000564642 TESPA1A2RU30 521 aaPredicted RBP22.3■■□□□ 1.16
SYNGR3-204ENST00000564642 IGF2BP3O00425 579 aaKnown RBP eCLIP22.3■■□□□ 1.16
SYNGR3-204ENST00000564642 PPATQ06203 517 aa22.3■■□□□ 1.16
SYNGR3-204ENST00000564642 TGFBRAP1Q8WUH2 860 aa22.3■■□□□ 1.16
SYNGR3-204ENST00000564642 BOLA2Q9H3K6 86 aa22.3■■□□□ 1.16
SYNGR3-204ENST00000564642 ATRNL1Q5VV63 1379 aa22.29■■□□□ 1.16
SYNGR3-204ENST00000564642 CCL15-CCL14A0A0B4J2E2 113 aa22.29■■□□□ 1.16
SYNGR3-204ENST00000564642 GOLIM4O00461 696 aa22.29■■□□□ 1.16
SYNGR3-204ENST00000564642 ATP5JP18859 108 aa22.29■■□□□ 1.16
SYNGR3-204ENST00000564642 MAP3K10Q02779 954 aa22.29■■□□□ 1.16
SYNGR3-204ENST00000564642 PPIL2Q13356 520 aa22.29■■□□□ 1.16
SYNGR3-204ENST00000564642 CCL15Q16663 113 aa22.29■■□□□ 1.16
SYNGR3-204ENST00000564642 NOL9Q5SY16 702 aaKnown RBP22.29■■□□□ 1.16
SYNGR3-204ENST00000564642 CERS3Q8IU89 383 aa22.29■■□□□ 1.16
SYNGR3-204ENST00000564642 CFHR5Q9BXR6 569 aa22.29■■□□□ 1.16
SYNGR3-204ENST00000564642 CDK5RAP2Q96SN8 1893 aa22.28■■□□□ 1.16
SYNGR3-204ENST00000564642 PHF20L1A8MW92 1017 aa22.28■■□□□ 1.16
SYNGR3-204ENST00000564642 GPR25O00155 361 aa22.28■■□□□ 1.16
SYNGR3-204ENST00000564642 IRF6O14896 467 aa22.28■■□□□ 1.16
SYNGR3-204ENST00000564642 TBC1D12O60347 775 aa22.28■■□□□ 1.16
SYNGR3-204ENST00000564642 CETPP11597 493 aa22.28■■□□□ 1.16
SYNGR3-204ENST00000564642 DYNLL1P63167 89 aaKnown RBP22.28■■□□□ 1.16
SYNGR3-204ENST00000564642 MIGA1Q8NAN2 632 aa22.28■■□□□ 1.16
SYNGR3-204ENST00000564642 PTPN18Q99952 460 aa22.28■■□□□ 1.16
SYNGR3-204ENST00000564642 DHX36Q9H2U1 1008 aaKnown RBP22.28■■□□□ 1.16
SYNGR3-204ENST00000564642 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.28■■□□□ 1.16
SYNGR3-204ENST00000564642 COL2A1P02458 1487 aaPredicted RBP22.28■■□□□ 1.16
SYNGR3-204ENST00000564642 FOCADQ5VW36 1801 aa22.27■■□□□ 1.16
SYNGR3-204ENST00000564642 SNAPC2Q13487 334 aa22.27■■□□□ 1.16
SYNGR3-204ENST00000564642 DGKZQ13574 1117 aa22.27■■□□□ 1.16
SYNGR3-204ENST00000564642 NOM1Q5C9Z4 860 aaKnown RBP22.27■■□□□ 1.16
SYNGR3-204ENST00000564642 SLC9C2Q5TAH2 1124 aa22.27■■□□□ 1.16
SYNGR3-204ENST00000564642 MAPKAPK5Q8IW41 473 aa22.27■■□□□ 1.16
SYNGR3-204ENST00000564642 SCYL3Q8IZE3 742 aa22.27■■□□□ 1.16
SYNGR3-204ENST00000564642 BRI3BPQ8WY22 251 aa22.27■■□□□ 1.16
SYNGR3-204ENST00000564642 PICK1Q9NRD5 415 aa22.27■■□□□ 1.16
SYNGR3-204ENST00000564642 PAG1Q9NWQ8 432 aa22.27■■□□□ 1.16
SYNGR3-204ENST00000564642 CTNND1O60716 968 aaKnown RBP22.26■■□□□ 1.15
SYNGR3-204ENST00000564642 ZNF296Q8WUU4 475 aaPredicted RBP22.26■■□□□ 1.15
SYNGR3-204ENST00000564642 PI4KBQ9UBF8 816 aa22.26■■□□□ 1.15
SYNGR3-204ENST00000564642 SLURP2P0DP57 97 aa22.25■■□□□ 1.15
SYNGR3-204ENST00000564642 USP5P45974 858 aa22.25■■□□□ 1.15
SYNGR3-204ENST00000564642 EDC3Q96F86 508 aaKnown RBP22.25■■□□□ 1.15
SYNGR3-204ENST00000564642 GPATCH3Q96I76 525 aa22.25■■□□□ 1.15
SYNGR3-204ENST00000564642 HAUS7Q99871 368 aa22.25■■□□□ 1.15
SYNGR3-204ENST00000564642 R3HDMLQ9H3Y0 253 aa22.25■■□□□ 1.15
SYNGR3-204ENST00000564642 FLT1P17948 1338 aa22.25■■□□□ 1.15
SYNGR3-204ENST00000564642 MAGEB6P1A0A0J9YX57 407 aa22.24■■□□□ 1.15
SYNGR3-204ENST00000564642 FKTNO75072 461 aa22.24■■□□□ 1.15
SYNGR3-204ENST00000564642 PDE6AP16499 860 aa22.24■■□□□ 1.15
SYNGR3-204ENST00000564642 MCOLN1Q9GZU1 580 aa22.24■■□□□ 1.15
SYNGR3-204ENST00000564642 ECHDC1Q9NTX5 307 aa22.24■■□□□ 1.15
SYNGR3-204ENST00000564642 HERC5Q9UII4 1024 aaKnown RBP22.24■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 112 ms