RNA–Protein interactions for RNA: ENST00000563854.1

NME3-205, Transcript of NME/NM23 nucleoside diphosphate kinase 3, humanhuman

TSL 5

Gene NME3, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NME3-205ENST00000563854 NSUN4Q96CB9 384 aaKnown RBP21.71■■□□□ 1.07
NME3-205ENST00000563854 FAM163AQ96GL9 167 aaPredicted RBP21.71■■□□□ 1.07
NME3-205ENST00000563854 ZFYVE28Q9HCC9 887 aa21.71■■□□□ 1.07
NME3-205ENST00000563854 WDHD1O75717 1129 aaPredicted RBP21.7■■□□□ 1.06
NME3-205ENST00000563854 LDHCP07864 332 aa21.7■■□□□ 1.06
NME3-205ENST00000563854 RGS19P49795 217 aa21.7■■□□□ 1.06
NME3-205ENST00000563854 SP3Q02447 781 aa21.7■■□□□ 1.06
NME3-205ENST00000563854 PPATQ06203 517 aa21.7■■□□□ 1.06
NME3-205ENST00000563854 OTOP1Q7RTM1 612 aa21.7■■□□□ 1.06
NME3-205ENST00000563854 ZNF112Q9UJU3 913 aa21.7■■□□□ 1.06
NME3-205ENST00000563854 GPR75-ASB3A0A0A6YYF3 556 aa21.69■■□□□ 1.06
NME3-205ENST00000563854 DDTLA6NHG4 134 aaPredicted RBP21.69■■□□□ 1.06
NME3-205ENST00000563854 BTBD19C9JJ37 291 aa21.69■■□□□ 1.06
NME3-205ENST00000563854 SH3BP5LQ7L8J4 393 aa21.69■■□□□ 1.06
NME3-205ENST00000563854 NOL10Q9BSC4 688 aaKnown RBP21.69■■□□□ 1.06
NME3-205ENST00000563854 CCDC8Q9H0W5 538 aaPredicted RBP21.69■■□□□ 1.06
NME3-205ENST00000563854 TLR7Q9NYK1 1049 aaKnown RBP21.69■■□□□ 1.06
NME3-205ENST00000563854 EXOC6BQ9Y2D4 811 aa21.69■■□□□ 1.06
NME3-205ENST00000563854 NOP58Q9Y2X3 529 aaKnown RBP21.69■■□□□ 1.06
NME3-205ENST00000563854 SLURP2P0DP57 97 aa21.68■■□□□ 1.06
NME3-205ENST00000563854 MS4A1P11836 297 aa21.68■■□□□ 1.06
NME3-205ENST00000563854 RHBDL3P58872 404 aa21.68■■□□□ 1.06
NME3-205ENST00000563854 ATRNL1Q5VV63 1379 aa21.68■■□□□ 1.06
NME3-205ENST00000563854 MAST2Q6P0Q8 1798 aa21.68■■□□□ 1.06
NME3-205ENST00000563854 NOL9Q5SY16 702 aaKnown RBP21.67■■□□□ 1.06
NME3-205ENST00000563854 NAA16Q6N069 864 aaPredicted RBP21.67■■□□□ 1.06
NME3-205ENST00000563854 EFCC1Q9HA90 598 aa21.67■■□□□ 1.06
NME3-205ENST00000563854 PICK1Q9NRD5 415 aa21.67■■□□□ 1.06
NME3-205ENST00000563854 DBNLQ9UJU6 430 aaKnown RBP21.67■■□□□ 1.06
NME3-205ENST00000563854 ZAP70P43403 619 aa21.66■■□□□ 1.06
NME3-205ENST00000563854 TEX11Q8IYF3 940 aa21.66■■□□□ 1.06
NME3-205ENST00000563854 BCL11AQ9H165 835 aa21.66■■□□□ 1.06
NME3-205ENST00000563854 COG6Q9Y2V7 657 aa21.66■■□□□ 1.06
NME3-205ENST00000563854 FAM196BA6NMK8 535 aa21.65■■□□□ 1.06
NME3-205ENST00000563854 ECM2O94769 699 aaPredicted RBP21.65■■□□□ 1.06
NME3-205ENST00000563854 SCYL3Q8IZE3 742 aa21.65■■□□□ 1.06
NME3-205ENST00000563854 EAF2Q96CJ1 260 aaPredicted RBP21.65■■□□□ 1.06
NME3-205ENST00000563854 RCAN3Q9UKA8 241 aa21.65■■□□□ 1.06
NME3-205ENST00000563854 PHF20L1A8MW92 1017 aa21.64■■□□□ 1.05
NME3-205ENST00000563854 APBB1O00213 710 aa21.64■■□□□ 1.05
NME3-205ENST00000563854 CYP2E1P05181 493 aaPredicted RBP21.64■■□□□ 1.05
NME3-205ENST00000563854 AACSQ86V21 672 aa21.64■■□□□ 1.05
NME3-205ENST00000563854 SH3RF3Q8TEJ3 882 aaPredicted RBP21.64■■□□□ 1.05
NME3-205ENST00000563854 AATFQ9NY61 560 aaKnown RBP eCLIP21.64■■□□□ 1.05
NME3-205ENST00000563854 CAP1Q01518 475 aa21.63■■□□□ 1.05
NME3-205ENST00000563854 ERC1Q8IUD2 1116 aa21.63■■□□□ 1.05
NME3-205ENST00000563854 OSBPL5Q9H0X9 879 aaPredicted RBP21.63■■□□□ 1.05
NME3-205ENST00000563854 ZCCHC17Q9NP64 241 aaKnown RBP21.63■■□□□ 1.05
NME3-205ENST00000563854 PIH1D3Q9NQM4 214 aaKnown RBP21.63■■□□□ 1.05
NME3-205ENST00000563854 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.63■■□□□ 1.05
NME3-205ENST00000563854 DDX19BQ9UMR2 479 aa21.63■■□□□ 1.05
NME3-205ENST00000563854 KCNH4Q9UQ05 1017 aa21.63■■□□□ 1.05
NME3-205ENST00000563854 PTPN22Q9Y2R2 807 aa21.63■■□□□ 1.05
NME3-205ENST00000563854 ZHX2Q9Y6X8 837 aa21.63■■□□□ 1.05
NME3-205ENST00000563854 DOCK1Q14185 1865 aa21.62■■□□□ 1.05
NME3-205ENST00000563854 PDHXO00330 501 aa21.62■■□□□ 1.05
NME3-205ENST00000563854 TLR2O60603 784 aa21.62■■□□□ 1.05
NME3-205ENST00000563854 BAG3O95817 575 aa21.62■■□□□ 1.05
NME3-205ENST00000563854 ANKRD23Q86SG2 305 aa21.62■■□□□ 1.05
NME3-205ENST00000563854 XPO5Q9HAV4 1204 aaKnown RBP eCLIP21.62■■□□□ 1.05
NME3-205ENST00000563854 IL1RAPL2Q9NP60 686 aa21.62■■□□□ 1.05
NME3-205ENST00000563854 NDUFB9Q9Y6M9 179 aa21.62■■□□□ 1.05
NME3-205ENST00000563854 IDH1O75874 414 aaKnown RBP21.61■■□□□ 1.05
NME3-205ENST00000563854 MAP4K4O95819 1239 aaPredicted RBP21.61■■□□□ 1.05
NME3-205ENST00000563854 PTPRAP18433 802 aa21.61■■□□□ 1.05
NME3-205ENST00000563854 CCDC84Q86UT8 332 aaPredicted RBP21.61■■□□□ 1.05
NME3-205ENST00000563854 ZNF512BQ96KM6 892 aaPredicted RBP21.61■■□□□ 1.05
NME3-205ENST00000563854 CPA4Q9UI42 421 aa21.61■■□□□ 1.05
NME3-205ENST00000563854 KIF22Q14807 665 aa21.6■■□□□ 1.05
NME3-205ENST00000563854 ARHGEF6Q15052 776 aa21.6■■□□□ 1.05
NME3-205ENST00000563854 HSP90AB4PQ58FF6 505 aa21.6■■□□□ 1.05
NME3-205ENST00000563854 GADL1Q6ZQY3 521 aa21.6■■□□□ 1.05
NME3-205ENST00000563854 ADGRA1Q86SQ6 560 aa21.6■■□□□ 1.05
NME3-205ENST00000563854 MYO5AQ9Y4I1 1855 aaKnown RBP21.6■■□□□ 1.05
NME3-205ENST00000563854 ZSWIM8A7E2V4 1837 aa21.59■■□□□ 1.05
NME3-205ENST00000563854 TRIM75PA6NK02 468 aa21.59■■□□□ 1.05
NME3-205ENST00000563854 CXCL11O14625 94 aa21.59■■□□□ 1.05
NME3-205ENST00000563854 CTNND1O60716 968 aaKnown RBP21.59■■□□□ 1.05
NME3-205ENST00000563854 NPM3O75607 178 aaKnown RBP21.59■■□□□ 1.05
NME3-205ENST00000563854 PLCG2P16885 1265 aa21.59■■□□□ 1.05
NME3-205ENST00000563854 CYP7A1P22680 504 aa21.59■■□□□ 1.05
NME3-205ENST00000563854 MAP3K10Q02779 954 aa21.59■■□□□ 1.05
NME3-205ENST00000563854 MAPKAPK5Q8IW41 473 aa21.59■■□□□ 1.05
NME3-205ENST00000563854 TGFBRAP1Q8WUH2 860 aa21.59■■□□□ 1.05
NME3-205ENST00000563854 ARHGAP39Q9C0H5 1083 aa21.59■■□□□ 1.05
NME3-205ENST00000563854 COL2A1P02458 1487 aaPredicted RBP21.58■■□□□ 1.05
NME3-205ENST00000563854 HMMRO75330 724 aa21.58■■□□□ 1.05
NME3-205ENST00000563854 LACTBP83111 547 aaPredicted RBP21.58■■□□□ 1.05
NME3-205ENST00000563854 MOGSQ13724 837 aa21.58■■□□□ 1.05
NME3-205ENST00000563854 RHPN1Q8TCX5 695 aa21.58■■□□□ 1.05
NME3-205ENST00000563854 HTTP42858 3142 aa21.58■■□□□ 1.04
NME3-205ENST00000563854 DYNLL1P63167 89 aaKnown RBP21.57■■□□□ 1.04
NME3-205ENST00000563854 SLC4A8Q2Y0W8 1093 aa21.57■■□□□ 1.04
NME3-205ENST00000563854 RPAP2Q8IXW5 612 aaPredicted RBP21.57■■□□□ 1.04
NME3-205ENST00000563854 MIGA1Q8NAN2 632 aa21.57■■□□□ 1.04
NME3-205ENST00000563854 PARK7Q99497 189 aaKnown RBP21.57■■□□□ 1.04
NME3-205ENST00000563854 ZBTB40Q9NUA8 1239 aa21.57■■□□□ 1.04
NME3-205ENST00000563854 AFG3L2Q9Y4W6 797 aa21.57■■□□□ 1.04
NME3-205ENST00000563854 PTCH2Q9Y6C5 1203 aa21.57■■□□□ 1.04
NME3-205ENST00000563854 FLT1P17948 1338 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms