RNA–Protein interactions for RNA: ENST00000561623.5

GTF3C1-202, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,015 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-202ENST00000561623 FEZ2Q9UHY8 353 aaPredicted RBP11.43□□□□□ -0.58
GTF3C1-202ENST00000561623 SGSM2O43147 1006 aa11.43□□□□□ -0.58
GTF3C1-202ENST00000561623 NR1I2O75469 434 aa11.43□□□□□ -0.58
GTF3C1-202ENST00000561623 PNOCQ13519 176 aa11.43□□□□□ -0.58
GTF3C1-202ENST00000561623 SREK1Q8WXA9 508 aaKnown RBP11.43□□□□□ -0.58
GTF3C1-202ENST00000561623 RTL9Q8NET4 1388 aa11.43□□□□□ -0.58
GTF3C1-202ENST00000561623 SEC31AO94979 1220 aaKnown RBP11.43□□□□□ -0.58
GTF3C1-202ENST00000561623 TRIM14Q14142 442 aa11.43□□□□□ -0.58
GTF3C1-202ENST00000561623 GBP1P32455 592 aa11.43□□□□□ -0.58
GTF3C1-202ENST00000561623 DDB1Q16531 1140 aa11.43□□□□□ -0.58
GTF3C1-202ENST00000561623 USP21Q9UK80 565 aa11.43□□□□□ -0.58
GTF3C1-202ENST00000561623 NBPF6Q5VWK0 638 aa11.43□□□□□ -0.58
GTF3C1-202ENST00000561623 NBPF5PQ86XG9 351 aaPredicted RBP11.43□□□□□ -0.58
GTF3C1-202ENST00000561623 NBPF4Q96M43 638 aa11.43□□□□□ -0.58
GTF3C1-202ENST00000561623 FAM170AA1A519 330 aa11.43□□□□□ -0.58
GTF3C1-202ENST00000561623 KRT9P35527 623 aa11.43□□□□□ -0.58
GTF3C1-202ENST00000561623 TNNI2P48788 182 aa11.43□□□□□ -0.58
GTF3C1-202ENST00000561623 EIF6P56537 245 aaKnown RBP11.43□□□□□ -0.58
GTF3C1-202ENST00000561623 SEL1L2Q5TEA6 688 aa11.43□□□□□ -0.58
GTF3C1-202ENST00000561623 CDC5LQ99459 802 aaKnown RBP11.43□□□□□ -0.58
GTF3C1-202ENST00000561623 CIB2O75838 187 aa11.42□□□□□ -0.58
GTF3C1-202ENST00000561623 LRRC8AQ8IWT6 810 aa11.42□□□□□ -0.58
GTF3C1-202ENST00000561623 DNAI2Q9GZS0 605 aa11.42□□□□□ -0.58
GTF3C1-202ENST00000561623 NRBP1Q9UHY1 535 aa11.42□□□□□ -0.58
GTF3C1-202ENST00000561623 B4E1Z4 1266 aa11.42□□□□□ -0.58
GTF3C1-202ENST00000561623 ZBTB24O43167 697 aaPredicted RBP11.42□□□□□ -0.58
GTF3C1-202ENST00000561623 PDE4DQ08499 809 aa11.42□□□□□ -0.58
GTF3C1-202ENST00000561623 TTC19Q6DKK2 380 aaPredicted RBP11.42□□□□□ -0.58
GTF3C1-202ENST00000561623 UTP11Q9Y3A2 253 aaKnown RBP11.42□□□□□ -0.58
GTF3C1-202ENST00000561623 MAGEB6P1A0A0J9YX57 407 aa11.42□□□□□ -0.58
GTF3C1-202ENST00000561623 TRAF5O00463 557 aa11.42□□□□□ -0.58
GTF3C1-202ENST00000561623 GSPT1P15170 499 aaKnown RBP11.42□□□□□ -0.58
GTF3C1-202ENST00000561623 ZNF131P52739 623 aa11.42□□□□□ -0.58
GTF3C1-202ENST00000561623 SEPT6Q14141 434 aa11.42□□□□□ -0.58
GTF3C1-202ENST00000561623 MIPOL1Q8TD10 442 aa11.42□□□□□ -0.58
GTF3C1-202ENST00000561623 NDUFB9Q9Y6M9 179 aa11.42□□□□□ -0.58
GTF3C1-202ENST00000561623 NCKAP5LQ9HCH0 1330 aa11.42□□□□□ -0.58
GTF3C1-202ENST00000561623 ADGRL1O94910 1474 aa11.42□□□□□ -0.58
GTF3C1-202ENST00000561623 NEDD9Q14511 834 aa11.42□□□□□ -0.58
GTF3C1-202ENST00000561623 TMTC1Q8IUR5 882 aa11.42□□□□□ -0.58
GTF3C1-202ENST00000561623 KIAA1524Q8TCG1 905 aa11.42□□□□□ -0.58
GTF3C1-202ENST00000561623 HINFPQ9BQA5 517 aa11.42□□□□□ -0.58
GTF3C1-202ENST00000561623 C6orf50Q9HD87 102 aa11.42□□□□□ -0.58
GTF3C1-202ENST00000561623 FRMD3A2A2Y4 597 aa11.42□□□□□ -0.58
GTF3C1-202ENST00000561623 ATP1A2P50993 1020 aa11.42□□□□□ -0.58
GTF3C1-202ENST00000561623 GUCY2FP51841 1108 aa11.42□□□□□ -0.58
GTF3C1-202ENST00000561623 PPFIA1Q13136 1202 aa11.42□□□□□ -0.58
GTF3C1-202ENST00000561623 SLF2Q8IX21 1173 aa11.42□□□□□ -0.58
GTF3C1-202ENST00000561623 HELBQ8NG08 1087 aaPredicted RBP11.42□□□□□ -0.58
GTF3C1-202ENST00000561623 KLHDC4Q8TBB5 520 aa11.42□□□□□ -0.58
GTF3C1-202ENST00000561623 ARHGEF2Q92974 986 aaKnown RBP11.42□□□□□ -0.58
GTF3C1-202ENST00000561623 MTUS1Q9ULD2 1270 aa11.42□□□□□ -0.58
GTF3C1-202ENST00000561623 STK38LQ9Y2H1 464 aa11.42□□□□□ -0.58
GTF3C1-202ENST00000561623 CALML3P27482 149 aa11.41□□□□□ -0.58
GTF3C1-202ENST00000561623 PAK1Q13153 545 aa11.41□□□□□ -0.58
GTF3C1-202ENST00000561623 CACNA2D3Q8IZS8 1091 aa11.41□□□□□ -0.58
GTF3C1-202ENST00000561623 NOX5Q96PH1 765 aa11.41□□□□□ -0.58
GTF3C1-202ENST00000561623 ALDH3A1P30838 453 aa11.41□□□□□ -0.58
GTF3C1-202ENST00000561623 ME3Q16798 604 aa11.41□□□□□ -0.58
GTF3C1-202ENST00000561623 NAA16Q6N069 864 aaPredicted RBP11.41□□□□□ -0.58
GTF3C1-202ENST00000561623 BRD3Q15059 726 aa11.41□□□□□ -0.58
GTF3C1-202ENST00000561623 CSGALNACT2Q8N6G5 542 aa11.41□□□□□ -0.58
GTF3C1-202ENST00000561623 LINS1Q8NG48 757 aa11.41□□□□□ -0.58
GTF3C1-202ENST00000561623 STAMQ92783 540 aa11.41□□□□□ -0.58
GTF3C1-202ENST00000561623 MYCBPQ99417 103 aaPredicted RBP11.41□□□□□ -0.58
GTF3C1-202ENST00000561623 PDE11AQ9HCR9 933 aa11.41□□□□□ -0.58
GTF3C1-202ENST00000561623 PNMA6EA0A0J9YXQ4 647 aa11.41□□□□□ -0.58
GTF3C1-202ENST00000561623 CEP104O60308 925 aa11.41□□□□□ -0.58
GTF3C1-202ENST00000561623 CSPG5O95196 566 aa11.41□□□□□ -0.58
GTF3C1-202ENST00000561623 LDHCP07864 332 aa11.41□□□□□ -0.58
GTF3C1-202ENST00000561623 FAM13AO94988 1023 aa11.41□□□□□ -0.58
GTF3C1-202ENST00000561623 ARL1P40616 181 aaPredicted RBP11.41□□□□□ -0.58
GTF3C1-202ENST00000561623 POSTNQ15063 836 aa11.41□□□□□ -0.58
GTF3C1-202ENST00000561623 VSIG1Q86XK7 387 aa11.41□□□□□ -0.58
GTF3C1-202ENST00000561623 MLKLQ8NB16 471 aa11.41□□□□□ -0.58
GTF3C1-202ENST00000561623 LLPHQ9BRT6 129 aaKnown RBP11.41□□□□□ -0.58
GTF3C1-202ENST00000561623 KIAA0586Q9BVV6 1533 aa11.4□□□□□ -0.58
GTF3C1-202ENST00000561623 GNAQP50148 359 aa11.4□□□□□ -0.58
GTF3C1-202ENST00000561623 PIK3AP1Q6ZUJ8 805 aa11.4□□□□□ -0.58
GTF3C1-202ENST00000561623 MGARPQ8TDB4 240 aa11.4□□□□□ -0.58
GTF3C1-202ENST00000561623 FERMT1Q9BQL6 677 aa11.4□□□□□ -0.58
GTF3C1-202ENST00000561623 MYL10Q9BUA6 226 aa11.4□□□□□ -0.58
GTF3C1-202ENST00000561623 THOC2Q8NI27 1593 aaKnown RBP11.4□□□□□ -0.58
GTF3C1-202ENST00000561623 CUTAO60888 179 aa11.4□□□□□ -0.58
GTF3C1-202ENST00000561623 NOL3O60936 208 aaKnown RBP11.4□□□□□ -0.58
GTF3C1-202ENST00000561623 RILPL1Q5EBL4 403 aa11.4□□□□□ -0.58
GTF3C1-202ENST00000561623 DPH6Q7L8W6 267 aa11.4□□□□□ -0.58
GTF3C1-202ENST00000561623 ZBTB33Q86T24 672 aa11.4□□□□□ -0.58
GTF3C1-202ENST00000561623 PHKBQ93100 1093 aa11.4□□□□□ -0.58
GTF3C1-202ENST00000561623 FAM114A2Q9NRY5 505 aa11.4□□□□□ -0.58
GTF3C1-202ENST00000561623 HELLSQ9NRZ9 838 aa11.4□□□□□ -0.58
GTF3C1-202ENST00000561623 ANAPC4Q9UJX5 808 aa11.4□□□□□ -0.58
GTF3C1-202ENST00000561623 PALD1Q9ULE6 856 aa11.4□□□□□ -0.58
GTF3C1-202ENST00000561623 PPP2R2CQ9Y2T4 447 aa11.4□□□□□ -0.58
GTF3C1-202ENST00000561623 GCKP35557 465 aa11.4□□□□□ -0.58
GTF3C1-202ENST00000561623 PAK2Q13177 524 aa11.4□□□□□ -0.58
GTF3C1-202ENST00000561623 GKAP1Q5VSY0 366 aaPredicted RBP11.4□□□□□ -0.58
GTF3C1-202ENST00000561623 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.4□□□□□ -0.58
GTF3C1-202ENST00000561623 LETM2Q2VYF4 491 aa11.4□□□□□ -0.58
GTF3C1-202ENST00000561623 MICAL1Q8TDZ2 1067 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms