RNA–Protein interactions for RNA: ENST00000561359.1

HERC1-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 551 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-213ENST00000561359 ZNF428Q96B54 188 aa7.02□□□□□ -1.29
HERC1-213ENST00000561359 PHACTR3Q96KR7 559 aa7.02□□□□□ -1.29
HERC1-213ENST00000561359 GDF15Q99988 308 aa7.02□□□□□ -1.29
HERC1-213ENST00000561359 PCDHB15Q9Y5E8 787 aa7.02□□□□□ -1.29
HERC1-213ENST00000561359 SIPA1L3O60292 1781 aaPredicted RBP7.02□□□□□ -1.29
HERC1-213ENST00000561359 MUC3AQ02505 3323 aa7.01□□□□□ -1.29
HERC1-213ENST00000561359 SPTLC1O15269 473 aa7.01□□□□□ -1.29
HERC1-213ENST00000561359 GNRH1P01148 92 aa7.01□□□□□ -1.29
HERC1-213ENST00000561359 PRKAR2BP31323 418 aa7.01□□□□□ -1.29
HERC1-213ENST00000561359 GRK4P32298 578 aa7.01□□□□□ -1.29
HERC1-213ENST00000561359 IREB2P48200 963 aaKnown RBP7.01□□□□□ -1.29
HERC1-213ENST00000561359 PRMT2P55345 433 aa7.01□□□□□ -1.29
HERC1-213ENST00000561359 RPS8P62241 208 aaKnown RBP7.01□□□□□ -1.29
HERC1-213ENST00000561359 LACTBP83111 547 aaPredicted RBP7.01□□□□□ -1.29
HERC1-213ENST00000561359 TAF7Q15545 349 aaPredicted RBP7.01□□□□□ -1.29
HERC1-213ENST00000561359 MAP3K11Q16584 847 aa7.01□□□□□ -1.29
HERC1-213ENST00000561359 NLRP10Q86W26 655 aa7.01□□□□□ -1.29
HERC1-213ENST00000561359 TDHQ8IZJ6 230 aa7.01□□□□□ -1.29
HERC1-213ENST00000561359 RAET1EQ8TD07 263 aa7.01□□□□□ -1.29
HERC1-213ENST00000561359 U2AF1L4Q8WU68 220 aaKnown RBP7.01□□□□□ -1.29
HERC1-213ENST00000561359 FAM161BQ96MY7 647 aa7.01□□□□□ -1.29
HERC1-213ENST00000561359 THUMPD2Q9BTF0 503 aaKnown RBP7.01□□□□□ -1.29
HERC1-213ENST00000561359 DEFB129Q9H1M3 183 aa7.01□□□□□ -1.29
HERC1-213ENST00000561359 PKD2L1Q9P0L9 805 aa7.01□□□□□ -1.29
HERC1-213ENST00000561359 ZMYND8Q9ULU4 1186 aaPredicted RBP7.01□□□□□ -1.29
HERC1-213ENST00000561359 IRS2Q9Y4H2 1338 aa7.01□□□□□ -1.29
HERC1-213ENST00000561359 SCN9AQ15858 1988 aa7□□□□□ -1.29
HERC1-213ENST00000561359 TMEM265A0A087WTH1 108 aa7□□□□□ -1.29
HERC1-213ENST00000561359 CCL15-CCL14A0A0B4J2E2 113 aa7□□□□□ -1.29
HERC1-213ENST00000561359 TTC24A2A3L6 582 aaPredicted RBP7□□□□□ -1.29
HERC1-213ENST00000561359 UNCXA6NJT0 531 aa7□□□□□ -1.29
HERC1-213ENST00000561359 DGAT1O75907 488 aa7□□□□□ -1.29
HERC1-213ENST00000561359 TFRCP02786 760 aaKnown RBP7□□□□□ -1.29
HERC1-213ENST00000561359 CCNYL3P0C7X3 344 aa7□□□□□ -1.29
HERC1-213ENST00000561359 UBXN2AP68543 259 aa7□□□□□ -1.29
HERC1-213ENST00000561359 CCL15Q16663 113 aa7□□□□□ -1.29
HERC1-213ENST00000561359 SUPT20HL1Q3ZLR7 823 aa7□□□□□ -1.29
HERC1-213ENST00000561359 HSP90AB3PQ58FF7 597 aa7□□□□□ -1.29
HERC1-213ENST00000561359 MYSM1Q5VVJ2 828 aa7□□□□□ -1.29
HERC1-213ENST00000561359 PODNQ7Z5L7 613 aa7□□□□□ -1.29
HERC1-213ENST00000561359 C7orf61Q8IZ16 206 aa7□□□□□ -1.29
HERC1-213ENST00000561359 BRI3BPQ8WY22 251 aa7□□□□□ -1.29
HERC1-213ENST00000561359 TSC1Q92574 1164 aa7□□□□□ -1.29
HERC1-213ENST00000561359 OPTNQ96CV9 577 aa7□□□□□ -1.29
HERC1-213ENST00000561359 GUCD1Q96NT3 240 aa7□□□□□ -1.29
HERC1-213ENST00000561359 MXD3Q9BW11 206 aa7□□□□□ -1.29
HERC1-213ENST00000561359 ELP3Q9H9T3 547 aa7□□□□□ -1.29
HERC1-213ENST00000561359 PODXL2Q9NZ53 605 aa7□□□□□ -1.29
HERC1-213ENST00000561359 RIPOR2Q9Y4F9 1068 aa7□□□□□ -1.29
HERC1-213ENST00000561359 TLR2O60603 784 aa6.99□□□□□ -1.29
HERC1-213ENST00000561359 HOXD10P28358 340 aa6.99□□□□□ -1.29
HERC1-213ENST00000561359 MAGEA10P43363 369 aaPredicted RBP6.99□□□□□ -1.29
HERC1-213ENST00000561359 PSMC4P43686 418 aa6.99□□□□□ -1.29
HERC1-213ENST00000561359 GTF2A2P52657 109 aa6.99□□□□□ -1.29
HERC1-213ENST00000561359 SF3B3Q15393 1217 aaKnown RBP6.99□□□□□ -1.29
HERC1-213ENST00000561359 PTPRNQ16849 979 aa6.99□□□□□ -1.29
HERC1-213ENST00000561359 ANKRD13AQ8IZ07 590 aa6.99□□□□□ -1.29
HERC1-213ENST00000561359 TRIM47Q96LD4 638 aa6.99□□□□□ -1.29
HERC1-213ENST00000561359 UBE2OQ9C0C9 1292 aaKnown RBP6.99□□□□□ -1.29
HERC1-213ENST00000561359 RSPH6AQ9H0K4 717 aa6.99□□□□□ -1.29
HERC1-213ENST00000561359 SRRDQ9UH36 339 aa6.99□□□□□ -1.29
HERC1-213ENST00000561359 KDM3BQ7LBC6 1761 aa6.99□□□□□ -1.29
HERC1-213ENST00000561359 SGPL1O95470 568 aa6.98□□□□□ -1.29
HERC1-213ENST00000561359 ANXA1P04083 346 aa6.98□□□□□ -1.29
HERC1-213ENST00000561359 SYN1P17600 705 aa6.98□□□□□ -1.29
HERC1-213ENST00000561359 EIF4A1P60842 406 aaKnown RBP6.98□□□□□ -1.29
HERC1-213ENST00000561359 AIMP1Q12904 312 aaKnown RBP6.98□□□□□ -1.29
HERC1-213ENST00000561359 DACT2Q5SW24 774 aa6.98□□□□□ -1.29
HERC1-213ENST00000561359 FAM43AQ8N2R8 423 aa6.98□□□□□ -1.29
HERC1-213ENST00000561359 MAFAQ8NHW3 353 aaPredicted RBP6.98□□□□□ -1.29
HERC1-213ENST00000561359 PNISRQ8TF01 805 aaKnown RBP6.98□□□□□ -1.29
HERC1-213ENST00000561359 FAM89AQ96GI7 184 aa6.98□□□□□ -1.29
HERC1-213ENST00000561359 UNC93B1Q9H1C4 597 aa6.98□□□□□ -1.29
HERC1-213ENST00000561359 KDM4CQ9H3R0 1056 aa6.98□□□□□ -1.29
HERC1-213ENST00000561359 POLR3EQ9NVU0 708 aa6.98□□□□□ -1.29
HERC1-213ENST00000561359 LIMD1Q9UGP4 676 aa6.98□□□□□ -1.29
HERC1-213ENST00000561359 PIEZO1Q92508 2521 aa6.98□□□□□ -1.29
HERC1-213ENST00000561359 DDX60Q8IY21 1712 aaKnown RBP6.98□□□□□ -1.29
HERC1-213ENST00000561359 TAF1P21675 1872 aa6.98□□□□□ -1.29
HERC1-213ENST00000561359 MYO3BQ8WXR4 1341 aa6.98□□□□□ -1.29
HERC1-213ENST00000561359 LRRC37AA6NMS7 1700 aa6.97□□□□□ -1.29
HERC1-213ENST00000561359 WNT7AO00755 349 aa6.97□□□□□ -1.29
HERC1-213ENST00000561359 USP2O75604 605 aaPredicted RBP6.97□□□□□ -1.29
HERC1-213ENST00000561359 EIF2S2P20042 333 aaKnown RBP6.97□□□□□ -1.29
HERC1-213ENST00000561359 CTHP32929 405 aa6.97□□□□□ -1.29
HERC1-213ENST00000561359 CLK2P49760 499 aaKnown RBP6.97□□□□□ -1.29
HERC1-213ENST00000561359 MMP14P50281 582 aa6.97□□□□□ -1.29
HERC1-213ENST00000561359 DLGAP5Q15398 846 aa6.97□□□□□ -1.29
HERC1-213ENST00000561359 PROSER3Q2NL68 480 aa6.97□□□□□ -1.29
HERC1-213ENST00000561359 RTL5Q5HYW3 569 aaPredicted RBP6.97□□□□□ -1.29
HERC1-213ENST00000561359 NBPF12Q5TAG4 269 aaPredicted RBP6.97□□□□□ -1.29
HERC1-213ENST00000561359 DESI1Q6ICB0 168 aa6.97□□□□□ -1.29
HERC1-213ENST00000561359 FAM109BQ6ICB4 259 aaPredicted RBP6.97□□□□□ -1.29
HERC1-213ENST00000561359 COPS6Q7L5N1 327 aa6.97□□□□□ -1.29
HERC1-213ENST00000561359 NECAB2Q7Z6G3 386 aa6.97□□□□□ -1.29
HERC1-213ENST00000561359 KIAA0825Q8IV33 1275 aa6.97□□□□□ -1.29
HERC1-213ENST00000561359 HELBQ8NG08 1087 aaPredicted RBP6.97□□□□□ -1.29
HERC1-213ENST00000561359 PAWRQ96IZ0 340 aaKnown RBP6.97□□□□□ -1.29
HERC1-213ENST00000561359 PPP2R3BQ9Y5P8 575 aa6.97□□□□□ -1.29
HERC1-213ENST00000561359 ANKRD36CQ5JPF3 1778 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms