RNA–Protein interactions for RNA: ENST00000560970.5

TPM1-227, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,039 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-227ENST00000560970 PDS5AQ29RF7 1337 aaKnown RBP13.29□□□□□ -0.28
TPM1-227ENST00000560970 COL2A1P02458 1487 aaPredicted RBP13.29□□□□□ -0.28
TPM1-227ENST00000560970 PDHXO00330 501 aa13.28□□□□□ -0.28
TPM1-227ENST00000560970 ZBTB22O15209 634 aa13.28□□□□□ -0.28
TPM1-227ENST00000560970 PHKA1P46020 1223 aa13.28□□□□□ -0.28
TPM1-227ENST00000560970 C20orf194Q5TEA3 1177 aa13.28□□□□□ -0.28
TPM1-227ENST00000560970 C17orf99Q6UX52 265 aa13.28□□□□□ -0.28
TPM1-227ENST00000560970 C1orf115Q9H7X2 142 aa13.28□□□□□ -0.28
TPM1-227ENST00000560970 FAM198AQ9UFP1 575 aa13.28□□□□□ -0.28
TPM1-227ENST00000560970 DENND2AQ9ULE3 1009 aa13.28□□□□□ -0.28
TPM1-227ENST00000560970 PA2G4Q9UQ80 394 aaKnown RBP13.28□□□□□ -0.28
TPM1-227ENST00000560970 GAKO14976 1311 aa13.28□□□□□ -0.28
TPM1-227ENST00000560970 PLXNB2O15031 1838 aa13.27□□□□□ -0.28
TPM1-227ENST00000560970 DOCK3Q8IZD9 2030 aa13.27□□□□□ -0.28
TPM1-227ENST00000560970 MYCP01106 439 aaPredicted RBP13.27□□□□□ -0.29
TPM1-227ENST00000560970 IL15P40933 162 aaPredicted RBP13.27□□□□□ -0.29
TPM1-227ENST00000560970 MTX1Q13505 466 aa13.27□□□□□ -0.29
TPM1-227ENST00000560970 DZIP1Q86YF9 867 aaKnown RBP13.27□□□□□ -0.29
TPM1-227ENST00000560970 CEP126Q9P2H0 1117 aa13.27□□□□□ -0.29
TPM1-227ENST00000560970 CPA4Q9UI42 421 aa13.27□□□□□ -0.29
TPM1-227ENST00000560970 MYPNQ86TC9 1320 aa13.27□□□□□ -0.29
TPM1-227ENST00000560970 MYH1P12882 1939 aa13.27□□□□□ -0.29
TPM1-227ENST00000560970 PNMA6EA0A0J9YXQ4 647 aa13.26□□□□□ -0.29
TPM1-227ENST00000560970 ZBTB7BO15156 539 aaPredicted RBP13.26□□□□□ -0.29
TPM1-227ENST00000560970 GNAI2P04899 355 aa13.26□□□□□ -0.29
TPM1-227ENST00000560970 CTGFP29279 349 aa13.26□□□□□ -0.29
TPM1-227ENST00000560970 MOGSQ13724 837 aa13.26□□□□□ -0.29
TPM1-227ENST00000560970 DDX60LQ5H9U9 1706 aaKnown RBP13.26□□□□□ -0.29
TPM1-227ENST00000560970 SCYL3Q8IZE3 742 aa13.26□□□□□ -0.29
TPM1-227ENST00000560970 NAV1Q8NEY1 1877 aa13.26□□□□□ -0.29
TPM1-227ENST00000560970 SHISA4Q96DD7 197 aa13.26□□□□□ -0.29
TPM1-227ENST00000560970 TRIM47Q96LD4 638 aa13.26□□□□□ -0.29
TPM1-227ENST00000560970 USP40Q9NVE5 1235 aa13.26□□□□□ -0.29
TPM1-227ENST00000560970 SRRDQ9UH36 339 aa13.26□□□□□ -0.29
TPM1-227ENST00000560970 HDAC5Q9UQL6 1122 aa13.26□□□□□ -0.29
TPM1-227ENST00000560970 MYH8P13535 1937 aa13.25□□□□□ -0.29
TPM1-227ENST00000560970 ENTPD3O75355 529 aa13.25□□□□□ -0.29
TPM1-227ENST00000560970 OSBPP22059 807 aa13.25□□□□□ -0.29
TPM1-227ENST00000560970 ADORA1P30542 326 aa13.25□□□□□ -0.29
TPM1-227ENST00000560970 PSMC4P43686 418 aa13.25□□□□□ -0.29
TPM1-227ENST00000560970 RGS3P49796 1198 aa13.25□□□□□ -0.29
TPM1-227ENST00000560970 RASGRF1Q13972 1273 aa13.25□□□□□ -0.29
TPM1-227ENST00000560970 MVPQ14764 893 aaKnown RBP13.25□□□□□ -0.29
TPM1-227ENST00000560970 CCDC102BQ68D86 513 aa13.25□□□□□ -0.29
TPM1-227ENST00000560970 IDI2Q9BXS1 227 aa13.25□□□□□ -0.29
TPM1-227ENST00000560970 COPRSQ9NQ92 184 aa13.25□□□□□ -0.29
TPM1-227ENST00000560970 PICK1Q9NRD5 415 aa13.25□□□□□ -0.29
TPM1-227ENST00000560970 COG6Q9Y2V7 657 aa13.25□□□□□ -0.29
TPM1-227ENST00000560970 MROH7-TTC4A0A0A0MT08 1334 aa13.24□□□□□ -0.29
TPM1-227ENST00000560970 A0A0G2JLL6 359 aaPredicted RBP13.24□□□□□ -0.29
TPM1-227ENST00000560970 SRGAP3O43295 1099 aa13.24□□□□□ -0.29
TPM1-227ENST00000560970 ECM2O94769 699 aaPredicted RBP13.24□□□□□ -0.29
TPM1-227ENST00000560970 HOXD10P28358 340 aa13.24□□□□□ -0.29
TPM1-227ENST00000560970 FCGRTP55899 365 aa13.24□□□□□ -0.29
TPM1-227ENST00000560970 PRRT2Q7Z6L0 340 aaPredicted RBP13.24□□□□□ -0.29
TPM1-227ENST00000560970 SLF2Q8IX21 1173 aa13.24□□□□□ -0.29
TPM1-227ENST00000560970 RAET1EQ8TD07 263 aa13.24□□□□□ -0.29
TPM1-227ENST00000560970 TRIOBPQ9H2D6 2365 aa13.24□□□□□ -0.29
TPM1-227ENST00000560970 CXCL11O14625 94 aa13.23□□□□□ -0.29
TPM1-227ENST00000560970 FMNL1O95466 1100 aaPredicted RBP13.23□□□□□ -0.29
TPM1-227ENST00000560970 BCRP11274 1271 aa13.23□□□□□ -0.29
TPM1-227ENST00000560970 GRK4P32298 578 aa13.23□□□□□ -0.29
TPM1-227ENST00000560970 FXR1P51114 621 aaKnown RBP eCLIP13.23□□□□□ -0.29
TPM1-227ENST00000560970 ZSCAN29Q8IWY8 852 aaPredicted RBP13.23□□□□□ -0.29
TPM1-227ENST00000560970 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.23□□□□□ -0.29
TPM1-227ENST00000560970 A0A1B0GUL7 405 aa13.22□□□□□ -0.29
TPM1-227ENST00000560970 PHF20L1A8MW92 1017 aa13.22□□□□□ -0.29
TPM1-227ENST00000560970 CYP2C8P10632 490 aa13.22□□□□□ -0.29
TPM1-227ENST00000560970 PTPRAP18433 802 aa13.22□□□□□ -0.29
TPM1-227ENST00000560970 BTDP43251 543 aa13.22□□□□□ -0.29
TPM1-227ENST00000560970 PRKCZQ05513 592 aa13.22□□□□□ -0.29
TPM1-227ENST00000560970 POLA2Q14181 598 aa13.22□□□□□ -0.29
TPM1-227ENST00000560970 MTFR1Q15390 333 aa13.22□□□□□ -0.29
TPM1-227ENST00000560970 GPAT2Q6NUI2 795 aa13.22□□□□□ -0.29
TPM1-227ENST00000560970 FASTKD5Q7L8L6 764 aaKnown RBP13.22□□□□□ -0.29
TPM1-227ENST00000560970 ZFPM1Q8IX07 1006 aa13.22□□□□□ -0.29
TPM1-227ENST00000560970 SLAIN1Q8ND83 568 aa13.22□□□□□ -0.29
TPM1-227ENST00000560970 NKX2-3Q8TAU0 364 aa13.22□□□□□ -0.29
TPM1-227ENST00000560970 ABCF2Q9UG63 623 aa13.22□□□□□ -0.29
TPM1-227ENST00000560970 SLC45A1Q9Y2W3 748 aa13.22□□□□□ -0.29
TPM1-227ENST00000560970 RANBP2P49792 3224 aaKnown RBP13.22□□□□□ -0.29
TPM1-227ENST00000560970 MS4A1P11836 297 aa13.21□□□□□ -0.29
TPM1-227ENST00000560970 CCL5P13501 91 aa13.21□□□□□ -0.29
TPM1-227ENST00000560970 RRP1P56182 461 aaKnown RBP13.21□□□□□ -0.29
TPM1-227ENST00000560970 UBXN2AP68543 259 aa13.21□□□□□ -0.29
TPM1-227ENST00000560970 PICALMQ13492 652 aa13.21□□□□□ -0.29
TPM1-227ENST00000560970 PDE3AQ14432 1141 aa13.21□□□□□ -0.29
TPM1-227ENST00000560970 SPTY2D1Q68D10 685 aaPredicted RBP13.21□□□□□ -0.29
TPM1-227ENST00000560970 CEP85Q6P2H3 762 aa13.21□□□□□ -0.29
TPM1-227ENST00000560970 GADL1Q6ZQY3 521 aa13.21□□□□□ -0.29
TPM1-227ENST00000560970 SH3BP5LQ7L8J4 393 aa13.21□□□□□ -0.29
TPM1-227ENST00000560970 DDX4Q9NQI0 724 aaKnown RBP13.21□□□□□ -0.29
TPM1-227ENST00000560970 DDX19BQ9UMR2 479 aa13.21□□□□□ -0.29
TPM1-227ENST00000560970 AKAP2Q9Y2D5 859 aa13.21□□□□□ -0.29
TPM1-227ENST00000560970 SZT2Q5T011 3432 aa13.2□□□□□ -0.3
TPM1-227ENST00000560970 DDTLA6NHG4 134 aaPredicted RBP13.2□□□□□ -0.3
TPM1-227ENST00000560970 H0YGN5 161 aa13.2□□□□□ -0.3
TPM1-227ENST00000560970 CTNND1O60716 968 aaKnown RBP13.2□□□□□ -0.3
TPM1-227ENST00000560970 GJA8P48165 433 aa13.2□□□□□ -0.3
TPM1-227ENST00000560970 ATP8B2P98198 1209 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms