RNA–Protein interactions for RNA: ENST00000559389.1

SNX1-206, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 753 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-206ENST00000559389 CDAN1Q8IWY9 1227 aa26.09■■□□□ 1.77
SNX1-206ENST00000559389 TGFBRAP1Q8WUH2 860 aa26.09■■□□□ 1.77
SNX1-206ENST00000559389 FAM227BQ96M60 508 aa26.09■■□□□ 1.77
SNX1-206ENST00000559389 OSBPL5Q9H0X9 879 aaPredicted RBP26.09■■□□□ 1.77
SNX1-206ENST00000559389 GTF3C3Q9Y5Q9 886 aa26.09■■□□□ 1.77
SNX1-206ENST00000559389 PAPPA2Q9BXP8 1791 aa26.09■■□□□ 1.77
SNX1-206ENST00000559389 HIP1O00291 1037 aa26.08■■□□□ 1.77
SNX1-206ENST00000559389 GPAA1O43292 621 aa26.08■■□□□ 1.77
SNX1-206ENST00000559389 NMIQ13287 307 aaPredicted RBP26.08■■□□□ 1.77
SNX1-206ENST00000559389 ZFPM1Q8IX07 1006 aa26.08■■□□□ 1.77
SNX1-206ENST00000559389 SEC62Q99442 399 aaKnown RBP26.08■■□□□ 1.77
SNX1-206ENST00000559389 DIAPH3Q9NSV4 1193 aa26.08■■□□□ 1.77
SNX1-206ENST00000559389 C1QTNF8P60827 252 aa26.07■■□□□ 1.76
SNX1-206ENST00000559389 MAPKAPK5Q8IW41 473 aa26.07■■□□□ 1.76
SNX1-206ENST00000559389 STRBPQ96SI9 672 aaKnown RBP26.07■■□□□ 1.76
SNX1-206ENST00000559389 HELLSQ9NRZ9 838 aa26.07■■□□□ 1.76
SNX1-206ENST00000559389 SIPA1L1O43166 1804 aa26.07■■□□□ 1.76
SNX1-206ENST00000559389 USP5P45974 858 aa26.06■■□□□ 1.76
SNX1-206ENST00000559389 NBPF12Q5TAG4 269 aaPredicted RBP26.06■■□□□ 1.76
SNX1-206ENST00000559389 CELF2O95319 508 aaKnown RBP26.05■■□□□ 1.76
SNX1-206ENST00000559389 SH3BP5LQ7L8J4 393 aa26.05■■□□□ 1.76
SNX1-206ENST00000559389 SDR42E1Q8WUS8 393 aa26.05■■□□□ 1.76
SNX1-206ENST00000559389 ZNF408Q9H9D4 720 aa26.05■■□□□ 1.76
SNX1-206ENST00000559389 MKRN1Q9UHC7 482 aaKnown RBP26.05■■□□□ 1.76
SNX1-206ENST00000559389 MYH1P12882 1939 aa26.05■■□□□ 1.76
SNX1-206ENST00000559389 PRKAB2O43741 272 aa26.04■■□□□ 1.76
SNX1-206ENST00000559389 NF2P35240 595 aa26.04■■□□□ 1.76
SNX1-206ENST00000559389 CST9Q5W186 159 aa26.04■■□□□ 1.76
SNX1-206ENST00000559389 CCDC129Q6ZRS4 1044 aa26.04■■□□□ 1.76
SNX1-206ENST00000559389 DDTLA6NHG4 134 aaPredicted RBP26.03■■□□□ 1.76
SNX1-206ENST00000559389 GNAT2P19087 354 aa26.03■■□□□ 1.76
SNX1-206ENST00000559389 SUPT20HL1Q3ZLR7 823 aa26.03■■□□□ 1.76
SNX1-206ENST00000559389 MCMDC2Q4G0Z9 681 aa26.03■■□□□ 1.76
SNX1-206ENST00000559389 DCP1AQ9NPI6 582 aaPredicted RBP26.03■■□□□ 1.76
SNX1-206ENST00000559389 SLC4A4Q9Y6R1 1079 aa26.03■■□□□ 1.76
SNX1-206ENST00000559389 CHMLP26374 656 aa26.02■■□□□ 1.76
SNX1-206ENST00000559389 ZSCAN29Q8IWY8 852 aaPredicted RBP26.02■■□□□ 1.76
SNX1-206ENST00000559389 CSRNP1Q96S65 589 aa26.02■■□□□ 1.76
SNX1-206ENST00000559389 ATP8A2Q9NTI2 1148 aa26.02■■□□□ 1.76
SNX1-206ENST00000559389 LAMB1P07942 1786 aa26.02■■□□□ 1.76
SNX1-206ENST00000559389 APLP1P51693 650 aa26.01■■□□□ 1.75
SNX1-206ENST00000559389 CCDC171Q6TFL3 1326 aa26.01■■□□□ 1.75
SNX1-206ENST00000559389 CWC27Q6UX04 472 aaKnown RBP26.01■■□□□ 1.75
SNX1-206ENST00000559389 ZNF589Q86UQ0 364 aaPredicted RBP26.01■■□□□ 1.75
SNX1-206ENST00000559389 RAD50Q92878 1312 aa26.01■■□□□ 1.75
SNX1-206ENST00000559389 HOOK2Q96ED9 719 aa26.01■■□□□ 1.75
SNX1-206ENST00000559389 DHX36Q9H2U1 1008 aaKnown RBP26.01■■□□□ 1.75
SNX1-206ENST00000559389 OTOFQ9HC10 1997 aa26.01■■□□□ 1.75
SNX1-206ENST00000559389 GBA2Q9HCG7 927 aaPredicted RBP26.01■■□□□ 1.75
SNX1-206ENST00000559389 SAP30BPQ9UHR5 308 aaKnown RBP26.01■■□□□ 1.75
SNX1-206ENST00000559389 BAZ2AQ9UIF9 1905 aaKnown RBP26■■□□□ 1.75
SNX1-206ENST00000559389 TMEM88BA6NKF7 163 aa26■■□□□ 1.75
SNX1-206ENST00000559389 EPB41L4AQ9HCS5 686 aaPredicted RBP26■■□□□ 1.75
SNX1-206ENST00000559389 GSG1L2A8MUP6 293 aa25.99■■□□□ 1.75
SNX1-206ENST00000559389 FOXP2O15409 715 aa25.99■■□□□ 1.75
SNX1-206ENST00000559389 FKBP1BP68106 108 aa25.99■■□□□ 1.75
SNX1-206ENST00000559389 IL25Q9H293 177 aa25.99■■□□□ 1.75
SNX1-206ENST00000559389 PALD1Q9ULE6 856 aa25.99■■□□□ 1.75
SNX1-206ENST00000559389 DCAF15Q66K64 600 aa25.98■■□□□ 1.75
SNX1-206ENST00000559389 GIMAP6Q6P9H5 292 aa25.98■■□□□ 1.75
SNX1-206ENST00000559389 DDRGK1Q96HY6 314 aa25.98■■□□□ 1.75
SNX1-206ENST00000559389 MCM9Q9NXL9 1143 aa25.98■■□□□ 1.75
SNX1-206ENST00000559389 MFAP1P55081 439 aaKnown RBP25.97■■□□□ 1.75
SNX1-206ENST00000559389 C2orf69Q8N8R5 385 aa25.97■■□□□ 1.75
SNX1-206ENST00000559389 RUFY2Q8WXA3 655 aa25.97■■□□□ 1.75
SNX1-206ENST00000559389 CREBZFQ9NS37 354 aa25.97■■□□□ 1.75
SNX1-206ENST00000559389 PPP1R12BO60237 982 aaPredicted RBP25.96■■□□□ 1.75
SNX1-206ENST00000559389 CDC45O75419 566 aa25.96■■□□□ 1.75
SNX1-206ENST00000559389 HLA-DOAP06340 250 aa25.96■■□□□ 1.75
SNX1-206ENST00000559389 HSPA6P17066 643 aa25.96■■□□□ 1.75
SNX1-206ENST00000559389 MAP3K11Q16584 847 aa25.96■■□□□ 1.75
SNX1-206ENST00000559389 VPS53Q5VIR6 699 aa25.96■■□□□ 1.75
SNX1-206ENST00000559389 PI4KBQ9UBF8 816 aa25.96■■□□□ 1.75
SNX1-206ENST00000559389 FZD1Q9UP38 647 aa25.96■■□□□ 1.75
SNX1-206ENST00000559389 PATL2C9JE40 543 aaKnown RBP25.95■■□□□ 1.74
SNX1-206ENST00000559389 PRKG1Q13976 671 aa25.95■■□□□ 1.74
SNX1-206ENST00000559389 SLC4A8Q2Y0W8 1093 aa25.95■■□□□ 1.74
SNX1-206ENST00000559389 MOB2Q70IA6 237 aa25.95■■□□□ 1.74
SNX1-206ENST00000559389 EHD4Q9H223 541 aa25.95■■□□□ 1.74
SNX1-206ENST00000559389 ARPP21Q9UBL0 812 aaPredicted RBP25.95■■□□□ 1.74
SNX1-206ENST00000559389 TLL2Q9Y6L7 1015 aa25.95■■□□□ 1.74
SNX1-206ENST00000559389 TBC1D12O60347 775 aa25.94■■□□□ 1.74
SNX1-206ENST00000559389 MAP3K10Q02779 954 aa25.94■■□□□ 1.74
SNX1-206ENST00000559389 TTLL12Q14166 644 aaPredicted RBP25.94■■□□□ 1.74
SNX1-206ENST00000559389 MIGA2Q7L4E1 593 aa25.94■■□□□ 1.74
SNX1-206ENST00000559389 ARMC9Q7Z3E5 817 aa25.94■■□□□ 1.74
SNX1-206ENST00000559389 TTC6Q86TZ1 520 aa25.94■■□□□ 1.74
SNX1-206ENST00000559389 IFNL3Q8IZI9 196 aa25.94■■□□□ 1.74
SNX1-206ENST00000559389 ZNF341Q9BYN7 854 aa25.94■■□□□ 1.74
SNX1-206ENST00000559389 NACAP1Q9BZK3 213 aa25.94■■□□□ 1.74
SNX1-206ENST00000559389 HERC5Q9UII4 1024 aaKnown RBP25.94■■□□□ 1.74
SNX1-206ENST00000559389 ANGEL1Q9UNK9 670 aaKnown RBP25.94■■□□□ 1.74
SNX1-206ENST00000559389 ZMYM6O95789 1325 aa25.93■■□□□ 1.74
SNX1-206ENST00000559389 SGSM2O43147 1006 aa25.93■■□□□ 1.74
SNX1-206ENST00000559389 USP2O75604 605 aaPredicted RBP25.93■■□□□ 1.74
SNX1-206ENST00000559389 APPP05067 770 aa25.93■■□□□ 1.74
SNX1-206ENST00000559389 POLR3DP05423 398 aaPredicted RBP25.93■■□□□ 1.74
SNX1-206ENST00000559389 SLURP2P0DP57 97 aa25.93■■□□□ 1.74
SNX1-206ENST00000559389 CYP2D6P10635 497 aa25.93■■□□□ 1.74
SNX1-206ENST00000559389 HSPD1P10809 573 aaKnown RBP25.93■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 74.5 ms