RNA–Protein interactions for RNA: ENST00000558649.5

RABGGTA-206, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-206ENST00000558649 DDX24Q9GZR7 859 aaKnown RBP eCLIP19.21■□□□□ 0.67
RABGGTA-206ENST00000558649 IGSF3O75054 1194 aa19.2■□□□□ 0.66
RABGGTA-206ENST00000558649 SLC10A3P09131 477 aa19.2■□□□□ 0.66
RABGGTA-206ENST00000558649 SLFNL1Q499Z3 407 aa19.2■□□□□ 0.66
RABGGTA-206ENST00000558649 CHD1LQ86WJ1 897 aa19.2■□□□□ 0.66
RABGGTA-206ENST00000558649 PI4K2BQ8TCG2 481 aa19.2■□□□□ 0.66
RABGGTA-206ENST00000558649 TGFBRAP1Q8WUH2 860 aa19.2■□□□□ 0.66
RABGGTA-206ENST00000558649 CCDC102AQ96A19 550 aa19.2■□□□□ 0.66
RABGGTA-206ENST00000558649 MAGEB6P1A0A0J9YX57 407 aa19.19■□□□□ 0.66
RABGGTA-206ENST00000558649 DDTLA6NHG4 134 aaPredicted RBP19.19■□□□□ 0.66
RABGGTA-206ENST00000558649 FAM155AB1AL88 458 aaPredicted RBP19.19■□□□□ 0.66
RABGGTA-206ENST00000558649 GLRX3O76003 335 aaKnown RBP19.19■□□□□ 0.66
RABGGTA-206ENST00000558649 CHGBP05060 677 aa19.19■□□□□ 0.66
RABGGTA-206ENST00000558649 PPP4CP60510 307 aa19.19■□□□□ 0.66
RABGGTA-206ENST00000558649 NUCB1Q02818 461 aa19.19■□□□□ 0.66
RABGGTA-206ENST00000558649 MAP3K11Q16584 847 aa19.19■□□□□ 0.66
RABGGTA-206ENST00000558649 DCAF15Q66K64 600 aa19.19■□□□□ 0.66
RABGGTA-206ENST00000558649 SH3BP5LQ7L8J4 393 aa19.19■□□□□ 0.66
RABGGTA-206ENST00000558649 MAPKAPK5Q8IW41 473 aa19.19■□□□□ 0.66
RABGGTA-206ENST00000558649 ZIC5Q96T25 663 aa19.19■□□□□ 0.66
RABGGTA-206ENST00000558649 SALL3Q9BXA9 1300 aa19.19■□□□□ 0.66
RABGGTA-206ENST00000558649 NAV1Q8NEY1 1877 aa19.18■□□□□ 0.66
RABGGTA-206ENST00000558649 ADD2P35612 726 aa19.18■□□□□ 0.66
RABGGTA-206ENST00000558649 NOGQ13253 232 aa19.18■□□□□ 0.66
RABGGTA-206ENST00000558649 LDLRAD1Q5T700 205 aa19.18■□□□□ 0.66
RABGGTA-206ENST00000558649 SLC10A4Q96EP9 437 aa19.18■□□□□ 0.66
RABGGTA-206ENST00000558649 WRNIP1Q96S55 665 aa19.18■□□□□ 0.66
RABGGTA-206ENST00000558649 OSBPL5Q9H0X9 879 aaPredicted RBP19.18■□□□□ 0.66
RABGGTA-206ENST00000558649 FLT1P17948 1338 aa19.18■□□□□ 0.66
RABGGTA-206ENST00000558649 TCRBV5S4A2TA0A5A2 114 aa19.17■□□□□ 0.66
RABGGTA-206ENST00000558649 CENPBP07199 599 aaPredicted RBP19.17■□□□□ 0.66
RABGGTA-206ENST00000558649 USP5P45974 858 aa19.17■□□□□ 0.66
RABGGTA-206ENST00000558649 PDE1AP54750 535 aa19.17■□□□□ 0.66
RABGGTA-206ENST00000558649 SLC4A8Q2Y0W8 1093 aa19.17■□□□□ 0.66
RABGGTA-206ENST00000558649 ANKRD13AQ8IZ07 590 aa19.17■□□□□ 0.66
RABGGTA-206ENST00000558649 ZNF341Q9BYN7 854 aa19.17■□□□□ 0.66
RABGGTA-206ENST00000558649 ELP3Q9H9T3 547 aa19.17■□□□□ 0.66
RABGGTA-206ENST00000558649 SAP30BPQ9UHR5 308 aaKnown RBP19.17■□□□□ 0.66
RABGGTA-206ENST00000558649 MYH1P12882 1939 aa19.17■□□□□ 0.66
RABGGTA-206ENST00000558649 HSPA1AP0DMV8 641 aaKnown RBP19.16■□□□□ 0.66
RABGGTA-206ENST00000558649 HSPA1BP0DMV9 641 aaKnown RBP19.16■□□□□ 0.66
RABGGTA-206ENST00000558649 SLURP2P0DP57 97 aa19.16■□□□□ 0.66
RABGGTA-206ENST00000558649 VGLL4Q14135 290 aa19.16■□□□□ 0.66
RABGGTA-206ENST00000558649 ZSCAN25Q6NSZ9 544 aa19.16■□□□□ 0.66
RABGGTA-206ENST00000558649 TMED8Q6PL24 325 aaPredicted RBP19.16■□□□□ 0.66
RABGGTA-206ENST00000558649 KBTBD3Q8NAB2 608 aa19.16■□□□□ 0.66
RABGGTA-206ENST00000558649 DDX55Q8NHQ9 600 aaKnown RBP eCLIP19.16■□□□□ 0.66
RABGGTA-206ENST00000558649 CSADQ9Y600 493 aa19.16■□□□□ 0.66
RABGGTA-206ENST00000558649 MBD4O95243 580 aa19.15■□□□□ 0.66
RABGGTA-206ENST00000558649 MAP2K2P36507 400 aa19.15■□□□□ 0.66
RABGGTA-206ENST00000558649 MAP3K9P80192 1104 aa19.15■□□□□ 0.66
RABGGTA-206ENST00000558649 KIF23Q02241 960 aaPredicted RBP19.15■□□□□ 0.66
RABGGTA-206ENST00000558649 PPP1R3FQ6ZSY5 799 aaPredicted RBP19.15■□□□□ 0.66
RABGGTA-206ENST00000558649 CERS3Q8IU89 383 aa19.15■□□□□ 0.66
RABGGTA-206ENST00000558649 LCORLQ8N3X6 602 aa19.15■□□□□ 0.66
RABGGTA-206ENST00000558649 ZKSCAN4Q969J2 545 aaPredicted RBP19.15■□□□□ 0.66
RABGGTA-206ENST00000558649 RIOK1Q9BRS2 568 aaKnown RBP19.15■□□□□ 0.66
RABGGTA-206ENST00000558649 FSD1Q9BTV5 496 aa19.15■□□□□ 0.66
RABGGTA-206ENST00000558649 ARMT1Q9H993 441 aa19.15■□□□□ 0.66
RABGGTA-206ENST00000558649 STAP2Q9UGK3 403 aa19.15■□□□□ 0.66
RABGGTA-206ENST00000558649 SIPA1L1O43166 1804 aa19.15■□□□□ 0.66
RABGGTA-206ENST00000558649 ATRNL1Q5VV63 1379 aa19.15■□□□□ 0.66
RABGGTA-206ENST00000558649 COL2A1P02458 1487 aaPredicted RBP19.15■□□□□ 0.66
RABGGTA-206ENST00000558649 FAM196BA6NMK8 535 aa19.14■□□□□ 0.65
RABGGTA-206ENST00000558649 NPM3O75607 178 aaKnown RBP19.14■□□□□ 0.65
RABGGTA-206ENST00000558649 NEFLP07196 543 aa19.14■□□□□ 0.65
RABGGTA-206ENST00000558649 AIDAQ96BJ3 306 aa19.14■□□□□ 0.65
RABGGTA-206ENST00000558649 CRNKL1Q9BZJ0 848 aaKnown RBP19.14■□□□□ 0.65
RABGGTA-206ENST00000558649 PALD1Q9ULE6 856 aa19.14■□□□□ 0.65
RABGGTA-206ENST00000558649 DDX60LQ5H9U9 1706 aaKnown RBP19.14■□□□□ 0.65
RABGGTA-206ENST00000558649 INPP5BP32019 993 aa19.13■□□□□ 0.65
RABGGTA-206ENST00000558649 MAP2K1Q02750 393 aaPredicted RBP19.13■□□□□ 0.65
RABGGTA-206ENST00000558649 UBE3CQ15386 1083 aa19.13■□□□□ 0.65
RABGGTA-206ENST00000558649 CNKSR2Q8WXI2 1034 aa19.13■□□□□ 0.65
RABGGTA-206ENST00000558649 WNK4Q96J92 1243 aa19.13■□□□□ 0.65
RABGGTA-206ENST00000558649 BEGAINQ9BUH8 593 aa19.13■□□□□ 0.65
RABGGTA-206ENST00000558649 DOCK1Q14185 1865 aa19.12■□□□□ 0.65
RABGGTA-206ENST00000558649 RNF113AO15541 343 aaKnown RBP19.12■□□□□ 0.65
RABGGTA-206ENST00000558649 SPRYD7Q5W111 196 aa19.12■□□□□ 0.65
RABGGTA-206ENST00000558649 SDR42E1Q8WUS8 393 aa19.12■□□□□ 0.65
RABGGTA-206ENST00000558649 OPTNQ96CV9 577 aa19.12■□□□□ 0.65
RABGGTA-206ENST00000558649 OTUD5Q96G74 571 aa19.12■□□□□ 0.65
RABGGTA-206ENST00000558649 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.12■□□□□ 0.65
RABGGTA-206ENST00000558649 ATAD5Q96QE3 1844 aa19.11■□□□□ 0.65
RABGGTA-206ENST00000558649 UNCXA6NJT0 531 aa19.11■□□□□ 0.65
RABGGTA-206ENST00000558649 PLEKHM2Q8IWE5 1019 aa19.11■□□□□ 0.65
RABGGTA-206ENST00000558649 TRIM34Q9BYJ4 488 aa19.11■□□□□ 0.65
RABGGTA-206ENST00000558649 PUS7LQ9H0K6 701 aaKnown RBP19.11■□□□□ 0.65
RABGGTA-206ENST00000558649 DHX36Q9H2U1 1008 aaKnown RBP19.11■□□□□ 0.65
RABGGTA-206ENST00000558649 WBP1LQ9NX94 342 aa19.11■□□□□ 0.65
RABGGTA-206ENST00000558649 SNCAIPQ9Y6H5 919 aa19.11■□□□□ 0.65
RABGGTA-206ENST00000558649 BAZ2AQ9UIF9 1905 aaKnown RBP19.1■□□□□ 0.65
RABGGTA-206ENST00000558649 TRIM6-TRIM34B2RNG4 842 aa19.1■□□□□ 0.65
RABGGTA-206ENST00000558649 HLA-DOAP06340 250 aa19.1■□□□□ 0.65
RABGGTA-206ENST00000558649 GJA5P36382 358 aa19.1■□□□□ 0.65
RABGGTA-206ENST00000558649 LRRFIP1Q32MZ4 808 aaKnown RBP19.1■□□□□ 0.65
RABGGTA-206ENST00000558649 CRACR2BQ8N4Y2 399 aaPredicted RBP19.1■□□□□ 0.65
RABGGTA-206ENST00000558649 LAMB1P07942 1786 aa19.1■□□□□ 0.65
RABGGTA-206ENST00000558649 FOXN1O15353 648 aa19.09■□□□□ 0.65
RABGGTA-206ENST00000558649 PRKAB2O43741 272 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms