RNA–Protein interactions for RNA: ENST00000558544.5

TPM1-214, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 1,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-214ENST00000558544 MAPKAPK5Q8IW41 473 aa21■□□□□ 0.95
TPM1-214ENST00000558544 ZFPM1Q8IX07 1006 aa21■□□□□ 0.95
TPM1-214ENST00000558544 FAM151AQ8WW52 585 aa21■□□□□ 0.95
TPM1-214ENST00000558544 CRNKL1Q9BZJ0 848 aaKnown RBP21■□□□□ 0.95
TPM1-214ENST00000558544 OTOFQ9HC10 1997 aa21■□□□□ 0.95
TPM1-214ENST00000558544 PAPPA2Q9BXP8 1791 aa20.99■□□□□ 0.95
TPM1-214ENST00000558544 CELF2O95319 508 aaKnown RBP20.99■□□□□ 0.95
TPM1-214ENST00000558544 USP5P45974 858 aa20.99■□□□□ 0.95
TPM1-214ENST00000558544 NMIQ13287 307 aaPredicted RBP20.99■□□□□ 0.95
TPM1-214ENST00000558544 NBPF12Q5TAG4 269 aaPredicted RBP20.99■□□□□ 0.95
TPM1-214ENST00000558544 FAM227BQ96M60 508 aa20.99■□□□□ 0.95
TPM1-214ENST00000558544 TEPSINQ96N21 525 aa20.99■□□□□ 0.95
TPM1-214ENST00000558544 LAMB1P07942 1786 aa20.99■□□□□ 0.95
TPM1-214ENST00000558544 A0A0D9SFI3 127 aa20.98■□□□□ 0.95
TPM1-214ENST00000558544 GPAA1O43292 621 aa20.98■□□□□ 0.95
TPM1-214ENST00000558544 TICAM2Q86XR7 235 aa20.98■□□□□ 0.95
TPM1-214ENST00000558544 SDR42E1Q8WUS8 393 aa20.98■□□□□ 0.95
TPM1-214ENST00000558544 OSBPL5Q9H0X9 879 aaPredicted RBP20.98■□□□□ 0.95
TPM1-214ENST00000558544 COL2A1P02458 1487 aaPredicted RBP20.98■□□□□ 0.95
TPM1-214ENST00000558544 PRKAB2O43741 272 aa20.97■□□□□ 0.95
TPM1-214ENST00000558544 NPM3O75607 178 aaKnown RBP20.97■□□□□ 0.95
TPM1-214ENST00000558544 BMP2KLQ5H9B9 411 aa20.97■□□□□ 0.95
TPM1-214ENST00000558544 DIAPH3Q9NSV4 1193 aa20.97■□□□□ 0.95
TPM1-214ENST00000558544 MYH8P13535 1937 aa20.97■□□□□ 0.95
TPM1-214ENST00000558544 NF2P35240 595 aa20.97■□□□□ 0.95
TPM1-214ENST00000558544 CST9Q5W186 159 aa20.97■□□□□ 0.95
TPM1-214ENST00000558544 CCDC129Q6ZRS4 1044 aa20.97■□□□□ 0.95
TPM1-214ENST00000558544 SH3BP5LQ7L8J4 393 aa20.97■□□□□ 0.95
TPM1-214ENST00000558544 ZSCAN29Q8IWY8 852 aaPredicted RBP20.97■□□□□ 0.95
TPM1-214ENST00000558544 HELLSQ9NRZ9 838 aa20.97■□□□□ 0.95
TPM1-214ENST00000558544 DDTLA6NHG4 134 aaPredicted RBP20.96■□□□□ 0.95
TPM1-214ENST00000558544 HIP1O00291 1037 aa20.96■□□□□ 0.95
TPM1-214ENST00000558544 APLP1P51693 650 aa20.96■□□□□ 0.95
TPM1-214ENST00000558544 SUPT20HL1Q3ZLR7 823 aa20.96■□□□□ 0.95
TPM1-214ENST00000558544 STRBPQ96SI9 672 aaKnown RBP20.96■□□□□ 0.95
TPM1-214ENST00000558544 SAP30BPQ9UHR5 308 aaKnown RBP20.96■□□□□ 0.95
TPM1-214ENST00000558544 FZD1Q9UP38 647 aa20.96■□□□□ 0.95
TPM1-214ENST00000558544 SLC4A4Q9Y6R1 1079 aa20.96■□□□□ 0.95
TPM1-214ENST00000558544 ATRNL1Q5VV63 1379 aa20.95■□□□□ 0.94
TPM1-214ENST00000558544 PRKG1Q13976 671 aa20.95■□□□□ 0.94
TPM1-214ENST00000558544 SLC4A8Q2Y0W8 1093 aa20.95■□□□□ 0.94
TPM1-214ENST00000558544 CWC27Q6UX04 472 aaKnown RBP20.95■□□□□ 0.94
TPM1-214ENST00000558544 CSRNP1Q96S65 589 aa20.95■□□□□ 0.94
TPM1-214ENST00000558544 GBA2Q9HCG7 927 aaPredicted RBP20.95■□□□□ 0.94
TPM1-214ENST00000558544 TMEM88BA6NKF7 163 aa20.94■□□□□ 0.94
TPM1-214ENST00000558544 TTLL12Q14166 644 aaPredicted RBP20.94■□□□□ 0.94
TPM1-214ENST00000558544 MCMDC2Q4G0Z9 681 aa20.94■□□□□ 0.94
TPM1-214ENST00000558544 DCP1AQ9NPI6 582 aaPredicted RBP20.94■□□□□ 0.94
TPM1-214ENST00000558544 ATAD5Q96QE3 1844 aa20.94■□□□□ 0.94
TPM1-214ENST00000558544 ZNF589Q86UQ0 364 aaPredicted RBP20.93■□□□□ 0.94
TPM1-214ENST00000558544 ATP8A2Q9NTI2 1148 aa20.93■□□□□ 0.94
TPM1-214ENST00000558544 MKRN1Q9UHC7 482 aaKnown RBP20.93■□□□□ 0.94
TPM1-214ENST00000558544 PALD1Q9ULE6 856 aa20.93■□□□□ 0.94
TPM1-214ENST00000558544 GNAT2P19087 354 aa20.92■□□□□ 0.94
TPM1-214ENST00000558544 CHMLP26374 656 aa20.92■□□□□ 0.94
TPM1-214ENST00000558544 MOB2Q70IA6 237 aa20.92■□□□□ 0.94
TPM1-214ENST00000558544 C2orf69Q8N8R5 385 aa20.92■□□□□ 0.94
TPM1-214ENST00000558544 CCDC171Q6TFL3 1326 aa20.92■□□□□ 0.94
TPM1-214ENST00000558544 GSG1L2A8MUP6 293 aa20.91■□□□□ 0.94
TPM1-214ENST00000558544 SLURP2P0DP57 97 aa20.91■□□□□ 0.94
TPM1-214ENST00000558544 HSPA6P17066 643 aa20.91■□□□□ 0.94
TPM1-214ENST00000558544 MIGA2Q7L4E1 593 aa20.91■□□□□ 0.94
TPM1-214ENST00000558544 HOOK2Q96ED9 719 aa20.91■□□□□ 0.94
TPM1-214ENST00000558544 DHX36Q9H2U1 1008 aaKnown RBP20.91■□□□□ 0.94
TPM1-214ENST00000558544 MCM9Q9NXL9 1143 aa20.91■□□□□ 0.94
TPM1-214ENST00000558544 ANGEL1Q9UNK9 670 aaKnown RBP20.91■□□□□ 0.94
TPM1-214ENST00000558544 DOCK1Q14185 1865 aa20.9■□□□□ 0.94
TPM1-214ENST00000558544 PPP1R12BO60237 982 aaPredicted RBP20.9■□□□□ 0.94
TPM1-214ENST00000558544 APPP05067 770 aa20.9■□□□□ 0.94
TPM1-214ENST00000558544 HTRA3P83110 453 aa20.9■□□□□ 0.94
TPM1-214ENST00000558544 VPS53Q5VIR6 699 aa20.9■□□□□ 0.94
TPM1-214ENST00000558544 DCAF15Q66K64 600 aa20.9■□□□□ 0.94
TPM1-214ENST00000558544 DDRGK1Q96HY6 314 aa20.9■□□□□ 0.94
TPM1-214ENST00000558544 IL25Q9H293 177 aa20.9■□□□□ 0.94
TPM1-214ENST00000558544 EPB41L4AQ9HCS5 686 aaPredicted RBP20.9■□□□□ 0.94
TPM1-214ENST00000558544 CREBZFQ9NS37 354 aa20.9■□□□□ 0.94
TPM1-214ENST00000558544 ABT1Q9ULW3 272 aaKnown RBP20.9■□□□□ 0.94
TPM1-214ENST00000558544 LAMA4Q16363 1823 aa20.9■□□□□ 0.94
TPM1-214ENST00000558544 USP2O75604 605 aaPredicted RBP20.89■□□□□ 0.93
TPM1-214ENST00000558544 POLR3DP05423 398 aaPredicted RBP20.89■□□□□ 0.93
TPM1-214ENST00000558544 HLA-DOAP06340 250 aa20.89■□□□□ 0.93
TPM1-214ENST00000558544 FKBP1BP68106 108 aa20.89■□□□□ 0.93
TPM1-214ENST00000558544 ARMC9Q7Z3E5 817 aa20.89■□□□□ 0.93
TPM1-214ENST00000558544 FAM196BA6NMK8 535 aa20.88■□□□□ 0.93
TPM1-214ENST00000558544 PATL2C9JE40 543 aaKnown RBP20.88■□□□□ 0.93
TPM1-214ENST00000558544 FOXP2O15409 715 aa20.88■□□□□ 0.93
TPM1-214ENST00000558544 CYP2D6P10635 497 aa20.88■□□□□ 0.93
TPM1-214ENST00000558544 TDO2P48775 406 aa20.88■□□□□ 0.93
TPM1-214ENST00000558544 EVX2Q03828 476 aa20.88■□□□□ 0.93
TPM1-214ENST00000558544 PI4KBQ9UBF8 816 aa20.88■□□□□ 0.93
TPM1-214ENST00000558544 TLL2Q9Y6L7 1015 aa20.88■□□□□ 0.93
TPM1-214ENST00000558544 RAD50Q92878 1312 aa20.88■□□□□ 0.93
TPM1-214ENST00000558544 CYP2D7A0A087X1C5 515 aa20.87■□□□□ 0.93
TPM1-214ENST00000558544 UBE2Q2LH0YL09 131 aa20.87■□□□□ 0.93
TPM1-214ENST00000558544 IREB2P48200 963 aaKnown RBP20.87■□□□□ 0.93
TPM1-214ENST00000558544 PLCD1P51178 756 aa20.87■□□□□ 0.93
TPM1-214ENST00000558544 MFAP1P55081 439 aaKnown RBP20.87■□□□□ 0.93
TPM1-214ENST00000558544 HUNKP57058 714 aa20.87■□□□□ 0.93
TPM1-214ENST00000558544 GIMAP6Q6P9H5 292 aa20.87■□□□□ 0.93
TPM1-214ENST00000558544 SAPCD2Q86UD0 394 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms