RNA–Protein interactions for RNA: ENST00000557654.5

GPHN-215, Transcript of gephyrin, humanhuman

TSL 4

Gene GPHN, Length 503 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-215ENST00000557654 PCDHA4Q9UN74 947 aa8.78□□□□□ -1
GPHN-215ENST00000557654 PCDHB5Q9Y5E4 795 aa8.78□□□□□ -1
GPHN-215ENST00000557654 LRRC14Q15048 493 aa8.77□□□□□ -1.01
GPHN-215ENST00000557654 TAF1CQ15572 869 aaPredicted RBP8.77□□□□□ -1.01
GPHN-215ENST00000557654 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.77□□□□□ -1.01
GPHN-215ENST00000557654 C12orf40Q86WS4 652 aa8.77□□□□□ -1.01
GPHN-215ENST00000557654 Q8N3U1 123 aa8.77□□□□□ -1.01
GPHN-215ENST00000557654 GAL3ST3Q96A11 431 aa8.77□□□□□ -1.01
GPHN-215ENST00000557654 TBC1D32Q96NH3 1257 aa8.77□□□□□ -1.01
GPHN-215ENST00000557654 ATXN3LQ9H3M9 355 aa8.77□□□□□ -1.01
GPHN-215ENST00000557654 RNF112Q9ULX5 631 aa8.77□□□□□ -1.01
GPHN-215ENST00000557654 CYP8B1Q9UNU6 501 aa8.77□□□□□ -1.01
GPHN-215ENST00000557654 LOC100996750A0A140TA64 210 aa8.76□□□□□ -1.01
GPHN-215ENST00000557654 PRR19A6NJB7 356 aa8.76□□□□□ -1.01
GPHN-215ENST00000557654 RNGTTO60942 597 aaKnown RBP8.76□□□□□ -1.01
GPHN-215ENST00000557654 CDK8P49336 464 aa8.76□□□□□ -1.01
GPHN-215ENST00000557654 LIG3P49916 1009 aa8.76□□□□□ -1.01
GPHN-215ENST00000557654 SEPT6Q14141 434 aa8.76□□□□□ -1.01
GPHN-215ENST00000557654 MAP7Q14244 749 aa8.76□□□□□ -1.01
GPHN-215ENST00000557654 INPP5AQ14642 412 aa8.76□□□□□ -1.01
GPHN-215ENST00000557654 PPM1JQ5JR12 505 aa8.76□□□□□ -1.01
GPHN-215ENST00000557654 SEZ6L2Q6UXD5 910 aa8.76□□□□□ -1.01
GPHN-215ENST00000557654 GATA6Q92908 595 aa8.76□□□□□ -1.01
GPHN-215ENST00000557654 CRELD1Q96HD1 420 aa8.76□□□□□ -1.01
GPHN-215ENST00000557654 KRTAP4-6Q9BYQ5 205 aa8.76□□□□□ -1.01
GPHN-215ENST00000557654 C1GALT1Q9NS00 363 aa8.76□□□□□ -1.01
GPHN-215ENST00000557654 USP31Q70CQ4 1352 aa8.75□□□□□ -1.01
GPHN-215ENST00000557654 FAM170BA6NMN3 283 aa8.75□□□□□ -1.01
GPHN-215ENST00000557654 SSTR4P31391 388 aa8.75□□□□□ -1.01
GPHN-215ENST00000557654 HNRNPUQ00839 825 aaKnown RBP eCLIP8.75□□□□□ -1.01
GPHN-215ENST00000557654 SMYD4Q8IYR2 804 aaPredicted RBP8.75□□□□□ -1.01
GPHN-215ENST00000557654 ISL2Q96A47 359 aa8.75□□□□□ -1.01
GPHN-215ENST00000557654 TLR6Q9Y2C9 796 aa8.75□□□□□ -1.01
GPHN-215ENST00000557654 MED26O95402 600 aa8.74□□□□□ -1.01
GPHN-215ENST00000557654 ERVK-24P63145 666 aa8.74□□□□□ -1.01
GPHN-215ENST00000557654 CDK5R2Q13319 367 aa8.74□□□□□ -1.01
GPHN-215ENST00000557654 LRFN4Q6PJG9 635 aa8.74□□□□□ -1.01
GPHN-215ENST00000557654 UBE3DQ7Z6J8 389 aa8.74□□□□□ -1.01
GPHN-215ENST00000557654 ZAR1Q86SH2 424 aa8.74□□□□□ -1.01
GPHN-215ENST00000557654 SLC51AQ86UW1 340 aa8.74□□□□□ -1.01
GPHN-215ENST00000557654 ZNF16P17020 682 aaPredicted RBP8.73□□□□□ -1.01
GPHN-215ENST00000557654 NTF4P34130 210 aa8.73□□□□□ -1.01
GPHN-215ENST00000557654 ST13P50502 369 aaKnown RBP8.73□□□□□ -1.01
GPHN-215ENST00000557654 ZNF326Q5BKZ1 582 aaKnown RBP8.73□□□□□ -1.01
GPHN-215ENST00000557654 AGMOQ6ZNB7 445 aa8.73□□□□□ -1.01
GPHN-215ENST00000557654 TFE3P19532 575 aaPredicted RBP8.72□□□□□ -1.01
GPHN-215ENST00000557654 HOXA10P31260 410 aaPredicted RBP8.72□□□□□ -1.01
GPHN-215ENST00000557654 RNF214Q8ND24 703 aa8.72□□□□□ -1.01
GPHN-215ENST00000557654 ELMO3Q96BJ8 720 aa8.72□□□□□ -1.01
GPHN-215ENST00000557654 PLPPR2Q96GM1 343 aa8.72□□□□□ -1.01
GPHN-215ENST00000557654 OSBPL1AQ9BXW6 950 aa8.72□□□□□ -1.01
GPHN-215ENST00000557654 SSU72Q9NP77 194 aaKnown RBP8.72□□□□□ -1.01
GPHN-215ENST00000557654 PICK1Q9NRD5 415 aa8.72□□□□□ -1.01
GPHN-215ENST00000557654 ATG3Q9NT62 314 aa8.72□□□□□ -1.01
GPHN-215ENST00000557654 PRAMEF27A3QJZ7 478 aa8.71□□□□□ -1.02
GPHN-215ENST00000557654 HYAL3O43820 417 aaPredicted RBP8.71□□□□□ -1.02
GPHN-215ENST00000557654 RING1Q06587 406 aa8.71□□□□□ -1.02
GPHN-215ENST00000557654 LRP8Q14114 963 aa8.71□□□□□ -1.02
GPHN-215ENST00000557654 MRPL58Q14197 206 aaKnown RBP8.71□□□□□ -1.02
GPHN-215ENST00000557654 ARTNQ5T4W7 220 aa8.71□□□□□ -1.02
GPHN-215ENST00000557654 ZNF765Q7L2R6 523 aa8.71□□□□□ -1.02
GPHN-215ENST00000557654 NOC4LQ9BVI4 516 aaKnown RBP8.71□□□□□ -1.02
GPHN-215ENST00000557654 LMNB1P20700 586 aa8.7□□□□□ -1.02
GPHN-215ENST00000557654 RPS26P62854 115 aaKnown RBP8.7□□□□□ -1.02
GPHN-215ENST00000557654 WIPI1Q5MNZ9 446 aaPredicted RBP8.7□□□□□ -1.02
GPHN-215ENST00000557654 PHC3Q8NDX5 983 aa8.7□□□□□ -1.02
GPHN-215ENST00000557654 PCOLCE2Q9UKZ9 415 aa8.7□□□□□ -1.02
GPHN-215ENST00000557654 CD97P48960 835 aa8.69□□□□□ -1.02
GPHN-215ENST00000557654 ZBTB37Q5TC79 503 aa8.69□□□□□ -1.02
GPHN-215ENST00000557654 SCARA3Q6AZY7 606 aa8.69□□□□□ -1.02
GPHN-215ENST00000557654 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.69□□□□□ -1.02
GPHN-215ENST00000557654 JARID2Q92833 1246 aaPredicted RBP8.69□□□□□ -1.02
GPHN-215ENST00000557654 ZFP64Q9NPA5 681 aa8.69□□□□□ -1.02
GPHN-215ENST00000557654 PIM2Q9P1W9 311 aa8.69□□□□□ -1.02
GPHN-215ENST00000557654 COBLO75128 1261 aa8.68□□□□□ -1.02
GPHN-215ENST00000557654 LEFTY1O75610 366 aa8.68□□□□□ -1.02
GPHN-215ENST00000557654 FAM87AP0C7U9 286 aa8.68□□□□□ -1.02
GPHN-215ENST00000557654 GIMAP7Q8NHV1 300 aa8.68□□□□□ -1.02
GPHN-215ENST00000557654 MIR1-1HGQ9H1L0 117 aa8.68□□□□□ -1.02
GPHN-215ENST00000557654 LEMD3Q9Y2U8 911 aa8.68□□□□□ -1.02
GPHN-215ENST00000557654 CYFIP1Q7L576 1253 aa8.67□□□□□ -1.02
GPHN-215ENST00000557654 LRRC4CQ9HCJ2 640 aa8.67□□□□□ -1.02
GPHN-215ENST00000557654 COPRSQ9NQ92 184 aa8.67□□□□□ -1.02
GPHN-215ENST00000557654 PCMTD2Q9NV79 361 aa8.67□□□□□ -1.02
GPHN-215ENST00000557654 MINDY4BA8MYZ0 360 aa8.66□□□□□ -1.02
GPHN-215ENST00000557654 PF4P02776 101 aa8.66□□□□□ -1.02
GPHN-215ENST00000557654 GBP2P32456 591 aaPredicted RBP8.66□□□□□ -1.02
GPHN-215ENST00000557654 LDLRAD1Q5T700 205 aa8.66□□□□□ -1.02
GPHN-215ENST00000557654 XP32Q5T750 250 aa8.66□□□□□ -1.02
GPHN-215ENST00000557654 OGFOD3Q6PK18 319 aa8.66□□□□□ -1.02
GPHN-215ENST00000557654 BNC2Q6ZN30 1099 aaPredicted RBP8.66□□□□□ -1.02
GPHN-215ENST00000557654 HDXQ7Z353 690 aa8.66□□□□□ -1.02
GPHN-215ENST00000557654 PSMG3-AS1Q96PY0 264 aa8.66□□□□□ -1.02
GPHN-215ENST00000557654 FBRSQ9HAH7 460 aa8.66□□□□□ -1.02
GPHN-215ENST00000557654 FANCGO15287 622 aa8.65□□□□□ -1.02
GPHN-215ENST00000557654 RLBP1P12271 317 aa8.65□□□□□ -1.02
GPHN-215ENST00000557654 GRIK1P39086 918 aa8.65□□□□□ -1.02
GPHN-215ENST00000557654 FAM160A1Q05DH4 1040 aa8.65□□□□□ -1.02
GPHN-215ENST00000557654 TOP6BLQ8N6T0 577 aa8.65□□□□□ -1.02
GPHN-215ENST00000557654 RHOVQ96L33 236 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms