RNA–Protein interactions for RNA: ENST00000556626.5

SPTB-208, Transcript of spectrin beta, erythrocytic, humanhuman

TSL 1 (best) BASIC

Gene SPTB, Length 10,153 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTB-208ENST00000556626 WHAMMQ8TF30 809 aa12.09□□□□□ -0.47
SPTB-208ENST00000556626 RRP36Q96EU6 259 aaKnown RBP12.09□□□□□ -0.47
SPTB-208ENST00000556626 EFCC1Q9HA90 598 aa12.09□□□□□ -0.47
SPTB-208ENST00000556626 GOLGA8KD6RF30 607 aa12.09□□□□□ -0.47
SPTB-208ENST00000556626 GIPC1O14908 333 aa12.09□□□□□ -0.47
SPTB-208ENST00000556626 SRGAP1Q7Z6B7 1085 aa12.09□□□□□ -0.47
SPTB-208ENST00000556626 CAPS2Q9BXY5 557 aa12.09□□□□□ -0.47
SPTB-208ENST00000556626 PRXQ9BXM0 1461 aa12.09□□□□□ -0.47
SPTB-208ENST00000556626 STK10O94804 968 aaKnown RBP12.09□□□□□ -0.47
SPTB-208ENST00000556626 SLC9C1Q4G0N8 1177 aa12.09□□□□□ -0.47
SPTB-208ENST00000556626 STAG1Q8WVM7 1258 aa12.09□□□□□ -0.47
SPTB-208ENST00000556626 KLHL14Q9P2G3 628 aa12.09□□□□□ -0.47
SPTB-208ENST00000556626 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.09□□□□□ -0.47
SPTB-208ENST00000556626 HGSO14964 777 aaPredicted RBP12.09□□□□□ -0.47
SPTB-208ENST00000556626 MPRIPQ6WCQ1 1025 aa12.09□□□□□ -0.47
SPTB-208ENST00000556626 DHX32Q7L7V1 743 aaKnown RBP12.09□□□□□ -0.47
SPTB-208ENST00000556626 PROSER2Q86WR7 435 aaPredicted RBP12.09□□□□□ -0.47
SPTB-208ENST00000556626 DDX21Q9NR30 783 aaKnown RBP eCLIP12.09□□□□□ -0.47
SPTB-208ENST00000556626 PSMD6Q15008 389 aa12.08□□□□□ -0.47
SPTB-208ENST00000556626 LRRD1A4D1F6 860 aa12.08□□□□□ -0.48
SPTB-208ENST00000556626 VWA3AA6NCI4 1184 aa12.08□□□□□ -0.48
SPTB-208ENST00000556626 FANCCQ00597 558 aa12.08□□□□□ -0.48
SPTB-208ENST00000556626 C17orf53Q8N3J3 647 aaPredicted RBP12.08□□□□□ -0.48
SPTB-208ENST00000556626 FAM71BQ8TC56 605 aa12.08□□□□□ -0.48
SPTB-208ENST00000556626 TBC1D8BQ0IIM8 1120 aa12.08□□□□□ -0.48
SPTB-208ENST00000556626 KIFC2Q96AC6 838 aa12.08□□□□□ -0.48
SPTB-208ENST00000556626 DISP3Q9P2K9 1392 aa12.08□□□□□ -0.48
SPTB-208ENST00000556626 EFCAB8A8MWE9 144 aa12.08□□□□□ -0.48
SPTB-208ENST00000556626 USP26Q9BXU7 913 aa12.08□□□□□ -0.48
SPTB-208ENST00000556626 RABEP2Q9H5N1 569 aa12.08□□□□□ -0.48
SPTB-208ENST00000556626 PRG4Q92954 1404 aaPredicted RBP12.08□□□□□ -0.48
SPTB-208ENST00000556626 FAM69CQ0P6D2 419 aa12.08□□□□□ -0.48
SPTB-208ENST00000556626 LGSNQ5TDP6 509 aa12.08□□□□□ -0.48
SPTB-208ENST00000556626 SAR1BQ9Y6B6 198 aa12.08□□□□□ -0.48
SPTB-208ENST00000556626 RGS16O15492 202 aaPredicted RBP12.08□□□□□ -0.48
SPTB-208ENST00000556626 ZNF500O60304 480 aaPredicted RBP12.08□□□□□ -0.48
SPTB-208ENST00000556626 RNF40O75150 1001 aa12.08□□□□□ -0.48
SPTB-208ENST00000556626 MYH6P13533 1939 aa12.08□□□□□ -0.48
SPTB-208ENST00000556626 KRT71Q3SY84 523 aa12.08□□□□□ -0.48
SPTB-208ENST00000556626 EFCAB13Q8IY85 973 aa12.08□□□□□ -0.48
SPTB-208ENST00000556626 IQCDQ96DY2 449 aa12.08□□□□□ -0.48
SPTB-208ENST00000556626 RILPQ96NA2 401 aa12.08□□□□□ -0.48
SPTB-208ENST00000556626 CLSTN2Q9H4D0 955 aa12.08□□□□□ -0.48
SPTB-208ENST00000556626 SNRKQ9NRH2 765 aa12.08□□□□□ -0.48
SPTB-208ENST00000556626 POLR2DO15514 142 aaKnown RBP12.07□□□□□ -0.48
SPTB-208ENST00000556626 SMIM24O75264 130 aa12.07□□□□□ -0.48
SPTB-208ENST00000556626 KRT5P13647 590 aa12.07□□□□□ -0.48
SPTB-208ENST00000556626 SLC4A4Q9Y6R1 1079 aa12.07□□□□□ -0.48
SPTB-208ENST00000556626 SOS1Q07889 1333 aaPredicted RBP12.07□□□□□ -0.48
SPTB-208ENST00000556626 FLOT1O75955 427 aa12.07□□□□□ -0.48
SPTB-208ENST00000556626 PLCD1P51178 756 aa12.07□□□□□ -0.48
SPTB-208ENST00000556626 RNASE9P60153 205 aaKnown RBP12.07□□□□□ -0.48
SPTB-208ENST00000556626 IFIH1Q9BYX4 1025 aaKnown RBP12.07□□□□□ -0.48
SPTB-208ENST00000556626 CBX8Q9HC52 389 aa12.07□□□□□ -0.48
SPTB-208ENST00000556626 CTNNA1P35221 906 aaKnown RBP12.07□□□□□ -0.48
SPTB-208ENST00000556626 NMIQ13287 307 aaPredicted RBP12.07□□□□□ -0.48
SPTB-208ENST00000556626 SV2BQ7L1I2 683 aa12.07□□□□□ -0.48
SPTB-208ENST00000556626 MEIS3Q99687 375 aa12.07□□□□□ -0.48
SPTB-208ENST00000556626 TACO1Q9BSH4 297 aaKnown RBP12.07□□□□□ -0.48
SPTB-208ENST00000556626 GRM8O00222 908 aa12.07□□□□□ -0.48
SPTB-208ENST00000556626 PPP4R1Q8TF05 950 aa12.07□□□□□ -0.48
SPTB-208ENST00000556626 ASIC3Q9UHC3 531 aa12.07□□□□□ -0.48
SPTB-208ENST00000556626 CABP5Q9NP86 173 aa12.07□□□□□ -0.48
SPTB-208ENST00000556626 TBC1D8O95759 1140 aa12.07□□□□□ -0.48
SPTB-208ENST00000556626 APOBRQ0VD83 1088 aa12.07□□□□□ -0.48
SPTB-208ENST00000556626 ASIC2Q16515 512 aa12.07□□□□□ -0.48
SPTB-208ENST00000556626 DPH6Q7L8W6 267 aa12.07□□□□□ -0.48
SPTB-208ENST00000556626 ZKSCAN3Q9BRR0 538 aa12.07□□□□□ -0.48
SPTB-208ENST00000556626 KCNH3Q9ULD8 1083 aa12.07□□□□□ -0.48
SPTB-208ENST00000556626 PAK1Q13153 545 aa12.07□□□□□ -0.48
SPTB-208ENST00000556626 PPP2R5EQ16537 467 aa12.07□□□□□ -0.48
SPTB-208ENST00000556626 BIVM-ERCC5R4GMW8 1640 aa12.07□□□□□ -0.48
SPTB-208ENST00000556626 TMCO4Q5TGY1 634 aa12.06□□□□□ -0.48
SPTB-208ENST00000556626 CCDC89Q8N998 374 aa12.06□□□□□ -0.48
SPTB-208ENST00000556626 ZNF202O95125 648 aa12.06□□□□□ -0.48
SPTB-208ENST00000556626 ZMAT2Q96NC0 199 aaKnown RBP12.06□□□□□ -0.48
SPTB-208ENST00000556626 MAGI1Q96QZ7 1491 aaPredicted RBP12.06□□□□□ -0.48
SPTB-208ENST00000556626 CLTAP09496 248 aa12.06□□□□□ -0.48
SPTB-208ENST00000556626 KRT15P19012 456 aa12.06□□□□□ -0.48
SPTB-208ENST00000556626 NCBP1Q09161 790 aaKnown RBP12.06□□□□□ -0.48
SPTB-208ENST00000556626 HSP90AA5PQ58FG0 334 aa12.06□□□□□ -0.48
SPTB-208ENST00000556626 SESN3P58005 492 aa12.06□□□□□ -0.48
SPTB-208ENST00000556626 UNC13AQ9UPW8 1703 aa12.06□□□□□ -0.48
SPTB-208ENST00000556626 TRAF5O00463 557 aa12.06□□□□□ -0.48
SPTB-208ENST00000556626 DNAJC8O75937 253 aaPredicted RBP12.06□□□□□ -0.48
SPTB-208ENST00000556626 TROVE2P10155 538 aaKnown RBP eCLIP12.06□□□□□ -0.48
SPTB-208ENST00000556626 TRIM58Q8NG06 486 aa12.06□□□□□ -0.48
SPTB-208ENST00000556626 RASA3Q14644 834 aa12.06□□□□□ -0.48
SPTB-208ENST00000556626 NBPF6Q5VWK0 638 aa12.06□□□□□ -0.48
SPTB-208ENST00000556626 NBPF4Q96M43 638 aa12.06□□□□□ -0.48
SPTB-208ENST00000556626 STX10O60499 249 aa12.06□□□□□ -0.48
SPTB-208ENST00000556626 LIN9Q5TKA1 542 aa12.06□□□□□ -0.48
SPTB-208ENST00000556626 PLEKHM2Q8IWE5 1019 aa12.06□□□□□ -0.48
SPTB-208ENST00000556626 CALUO43852 315 aaPredicted RBP12.06□□□□□ -0.48
SPTB-208ENST00000556626 WDR44Q5JSH3 913 aa12.06□□□□□ -0.48
SPTB-208ENST00000556626 MLKLQ8NB16 471 aa12.06□□□□□ -0.48
SPTB-208ENST00000556626 VPS16Q9H269 839 aa12.06□□□□□ -0.48
SPTB-208ENST00000556626 HOMER3Q9NSC5 361 aa12.06□□□□□ -0.48
SPTB-208ENST00000556626 MAPKBP1O60336 1514 aa12.06□□□□□ -0.48
SPTB-208ENST00000556626 P3H4Q92791 437 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms