RNA–Protein interactions for RNA: ENST00000556536.5

TUBB3-211, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 925 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-211ENST00000556536 IDI2Q9BXS1 227 aa20.88■□□□□ 0.93
TUBB3-211ENST00000556536 TMOD2Q9NZR1 351 aa20.88■□□□□ 0.93
TUBB3-211ENST00000556536 PGAP2Q9UHJ9 254 aa20.88■□□□□ 0.93
TUBB3-211ENST00000556536 PASKQ96RG2 1323 aa20.87■□□□□ 0.93
TUBB3-211ENST00000556536 GSG1L2A8MUP6 293 aa20.87■□□□□ 0.93
TUBB3-211ENST00000556536 USP5P45974 858 aa20.87■□□□□ 0.93
TUBB3-211ENST00000556536 LDHDQ86WU2 507 aa20.87■□□□□ 0.93
TUBB3-211ENST00000556536 ZFPM1Q8IX07 1006 aa20.87■□□□□ 0.93
TUBB3-211ENST00000556536 ZC3H15Q8WU90 426 aaKnown RBP20.87■□□□□ 0.93
TUBB3-211ENST00000556536 CLEC11AQ9Y240 323 aa20.87■□□□□ 0.93
TUBB3-211ENST00000556536 FLT1P17948 1338 aa20.86■□□□□ 0.93
TUBB3-211ENST00000556536 GNAT2P19087 354 aa20.86■□□□□ 0.93
TUBB3-211ENST00000556536 TCP10Q12799 353 aa20.86■□□□□ 0.93
TUBB3-211ENST00000556536 C8orf34Q49A92 452 aa20.86■□□□□ 0.93
TUBB3-211ENST00000556536 EPB41L4AQ9HCS5 686 aaPredicted RBP20.86■□□□□ 0.93
TUBB3-211ENST00000556536 PATL2C9JE40 543 aaKnown RBP20.85■□□□□ 0.93
TUBB3-211ENST00000556536 HSPD1P10809 573 aaKnown RBP20.85■□□□□ 0.93
TUBB3-211ENST00000556536 CTCFP49711 727 aaPredicted RBP20.85■□□□□ 0.93
TUBB3-211ENST00000556536 MFAP1P55081 439 aaKnown RBP20.85■□□□□ 0.93
TUBB3-211ENST00000556536 FKBP1CQ5VVH2 108 aa20.85■□□□□ 0.93
TUBB3-211ENST00000556536 DCPSQ96C86 337 aaKnown RBP20.85■□□□□ 0.93
TUBB3-211ENST00000556536 DCP1AQ9NPI6 582 aaPredicted RBP20.85■□□□□ 0.93
TUBB3-211ENST00000556536 PITPNM2Q9BZ72 1349 aa20.84■□□□□ 0.93
TUBB3-211ENST00000556536 APPP05067 770 aa20.84■□□□□ 0.93
TUBB3-211ENST00000556536 PTH1RQ03431 593 aa20.84■□□□□ 0.93
TUBB3-211ENST00000556536 RASA3Q14644 834 aa20.84■□□□□ 0.93
TUBB3-211ENST00000556536 DLK2Q6UY11 383 aa20.84■□□□□ 0.93
TUBB3-211ENST00000556536 APOBEC3FQ8IUX4 373 aaKnown RBP20.84■□□□□ 0.93
TUBB3-211ENST00000556536 OSBPL5Q9H0X9 879 aaPredicted RBP20.84■□□□□ 0.93
TUBB3-211ENST00000556536 SAP30BPQ9UHR5 308 aaKnown RBP20.84■□□□□ 0.93
TUBB3-211ENST00000556536 TMEM88BA6NKF7 163 aa20.83■□□□□ 0.93
TUBB3-211ENST00000556536 ADM5C9JUS6 153 aa20.83■□□□□ 0.93
TUBB3-211ENST00000556536 ENTPD3O75355 529 aa20.83■□□□□ 0.93
TUBB3-211ENST00000556536 NPM3O75607 178 aaKnown RBP20.83■□□□□ 0.93
TUBB3-211ENST00000556536 MAP1SQ66K74 1059 aaPredicted RBP20.83■□□□□ 0.93
TUBB3-211ENST00000556536 SH3BP5LQ7L8J4 393 aa20.83■□□□□ 0.93
TUBB3-211ENST00000556536 FAM83AQ86UY5 434 aa20.83■□□□□ 0.93
TUBB3-211ENST00000556536 CDAN1Q8IWY9 1227 aa20.83■□□□□ 0.93
TUBB3-211ENST00000556536 IFNL3Q8IZI9 196 aa20.83■□□□□ 0.93
TUBB3-211ENST00000556536 FAM151AQ8WW52 585 aa20.83■□□□□ 0.93
TUBB3-211ENST00000556536 TMEM39BQ9GZU3 492 aa20.83■□□□□ 0.93
TUBB3-211ENST00000556536 DEFB129Q9H1M3 183 aa20.83■□□□□ 0.93
TUBB3-211ENST00000556536 ATP8A2Q9NTI2 1148 aa20.83■□□□□ 0.93
TUBB3-211ENST00000556536 USP48Q86UV5 1035 aa20.82■□□□□ 0.92
TUBB3-211ENST00000556536 LSG1Q9H089 658 aaKnown RBP20.82■□□□□ 0.92
TUBB3-211ENST00000556536 CYP2D6P10635 497 aa20.81■□□□□ 0.92
TUBB3-211ENST00000556536 TNNI2P48788 182 aa20.81■□□□□ 0.92
TUBB3-211ENST00000556536 VEGFBP49765 207 aa20.81■□□□□ 0.92
TUBB3-211ENST00000556536 EVX2Q03828 476 aa20.81■□□□□ 0.92
TUBB3-211ENST00000556536 TNFAIP1Q13829 316 aa20.81■□□□□ 0.92
TUBB3-211ENST00000556536 SLC4A8Q2Y0W8 1093 aa20.81■□□□□ 0.92
TUBB3-211ENST00000556536 PRAMEF18Q5VWM3 479 aa20.81■□□□□ 0.92
TUBB3-211ENST00000556536 GIMAP6Q6P9H5 292 aa20.81■□□□□ 0.92
TUBB3-211ENST00000556536 KRT26Q7Z3Y9 468 aa20.81■□□□□ 0.92
TUBB3-211ENST00000556536 SULF1Q8IWU6 871 aa20.81■□□□□ 0.92
TUBB3-211ENST00000556536 DSCC1Q9BVC3 393 aa20.81■□□□□ 0.92
TUBB3-211ENST00000556536 GLIS2Q9BZE0 524 aaPredicted RBP20.81■□□□□ 0.92
TUBB3-211ENST00000556536 ANO2Q9NQ90 1003 aa20.81■□□□□ 0.92
TUBB3-211ENST00000556536 MCM9Q9NXL9 1143 aa20.81■□□□□ 0.92
TUBB3-211ENST00000556536 PALD1Q9ULE6 856 aa20.81■□□□□ 0.92
TUBB3-211ENST00000556536 RPAP1Q9BWH6 1393 aaPredicted RBP20.81■□□□□ 0.92
TUBB3-211ENST00000556536 CYP2D7A0A087X1C5 515 aa20.8■□□□□ 0.92
TUBB3-211ENST00000556536 DDTLA6NHG4 134 aaPredicted RBP20.8■□□□□ 0.92
TUBB3-211ENST00000556536 SEC24BO95487 1268 aa20.8■□□□□ 0.92
TUBB3-211ENST00000556536 ITGBL1O95965 494 aaPredicted RBP20.8■□□□□ 0.92
TUBB3-211ENST00000556536 FGAP02671 866 aa20.8■□□□□ 0.92
TUBB3-211ENST00000556536 TDO2P48775 406 aa20.8■□□□□ 0.92
TUBB3-211ENST00000556536 ALX1Q15699 326 aa20.8■□□□□ 0.92
TUBB3-211ENST00000556536 CTR9Q6PD62 1173 aa20.8■□□□□ 0.92
TUBB3-211ENST00000556536 KIAA1211Q6ZU35 1233 aa20.8■□□□□ 0.92
TUBB3-211ENST00000556536 TEPSINQ96N21 525 aa20.8■□□□□ 0.92
TUBB3-211ENST00000556536 NACAP1Q9BZK3 213 aa20.8■□□□□ 0.92
TUBB3-211ENST00000556536 USP17L12C9JPN9 530 aa20.79■□□□□ 0.92
TUBB3-211ENST00000556536 USP17L21D6R901 530 aa20.79■□□□□ 0.92
TUBB3-211ENST00000556536 SMIM22K7EJ46 135 aa20.79■□□□□ 0.92
TUBB3-211ENST00000556536 SLC34A2O95436 690 aa20.79■□□□□ 0.92
TUBB3-211ENST00000556536 CDC37L1Q7L3B6 337 aa20.79■□□□□ 0.92
TUBB3-211ENST00000556536 NAPBQ9H115 298 aa20.79■□□□□ 0.92
TUBB3-211ENST00000556536 WBP1LQ9NX94 342 aa20.79■□□□□ 0.92
TUBB3-211ENST00000556536 ZSCAN29Q8IWY8 852 aaPredicted RBP20.78■□□□□ 0.92
TUBB3-211ENST00000556536 MAP4K1Q92918 833 aa20.78■□□□□ 0.92
TUBB3-211ENST00000556536 DDRGK1Q96HY6 314 aa20.78■□□□□ 0.92
TUBB3-211ENST00000556536 PPP2R3BQ9Y5P8 575 aa20.78■□□□□ 0.92
TUBB3-211ENST00000556536 ATRNL1Q5VV63 1379 aa20.77■□□□□ 0.92
TUBB3-211ENST00000556536 ECM29Q5VYK3 1845 aa20.77■□□□□ 0.92
TUBB3-211ENST00000556536 TRAF5O00463 557 aa20.77■□□□□ 0.92
TUBB3-211ENST00000556536 POLR3DP05423 398 aaPredicted RBP20.77■□□□□ 0.92
TUBB3-211ENST00000556536 SLURP2P0DP57 97 aa20.77■□□□□ 0.92
TUBB3-211ENST00000556536 PLCD1P51178 756 aa20.77■□□□□ 0.92
TUBB3-211ENST00000556536 FMR1Q06787 632 aaKnown RBP eCLIP20.77■□□□□ 0.92
TUBB3-211ENST00000556536 NBPF12Q5TAG4 269 aaPredicted RBP20.77■□□□□ 0.92
TUBB3-211ENST00000556536 COL2A1P02458 1487 aaPredicted RBP20.76■□□□□ 0.91
TUBB3-211ENST00000556536 LBX1P52954 281 aa20.76■□□□□ 0.91
TUBB3-211ENST00000556536 SBK1Q52WX2 424 aa20.76■□□□□ 0.91
TUBB3-211ENST00000556536 C12orf60Q5U649 245 aa20.76■□□□□ 0.91
TUBB3-211ENST00000556536 CDCA5Q96FF9 252 aa20.76■□□□□ 0.91
TUBB3-211ENST00000556536 CSRNP1Q96S65 589 aa20.76■□□□□ 0.91
TUBB3-211ENST00000556536 DHX36Q9H2U1 1008 aaKnown RBP20.76■□□□□ 0.91
TUBB3-211ENST00000556536 ARPP21Q9UBL0 812 aaPredicted RBP20.76■□□□□ 0.91
TUBB3-211ENST00000556536 RBM8AQ9Y5S9 174 aaKnown RBP20.76■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 78 ms