RNA–Protein interactions for RNA: ENST00000556303.1

SNX6-207, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-207ENST00000556303 DDX19BQ9UMR2 479 aa15.47■□□□□ 0.07
SNX6-207ENST00000556303 HTTP42858 3142 aa15.47■□□□□ 0.07
SNX6-207ENST00000556303 RFX7Q2KHR2 1363 aa15.47■□□□□ 0.07
SNX6-207ENST00000556303 IRF6O14896 467 aa15.46■□□□□ 0.07
SNX6-207ENST00000556303 CRHR2Q13324 411 aa15.46■□□□□ 0.07
SNX6-207ENST00000556303 ARHGEF6Q15052 776 aa15.46■□□□□ 0.07
SNX6-207ENST00000556303 PANK1Q8TE04 598 aa15.46■□□□□ 0.07
SNX6-207ENST00000556303 CNKSR2Q8WXI2 1034 aa15.46■□□□□ 0.07
SNX6-207ENST00000556303 RAI14Q9P0K7 980 aa15.46■□□□□ 0.07
SNX6-207ENST00000556303 LRP2BPQ9P2M1 347 aa15.46■□□□□ 0.07
SNX6-207ENST00000556303 TBC1D12O60347 775 aa15.45■□□□□ 0.06
SNX6-207ENST00000556303 BAG3O95817 575 aa15.45■□□□□ 0.06
SNX6-207ENST00000556303 PLCG2P16885 1265 aa15.45■□□□□ 0.06
SNX6-207ENST00000556303 INPP5BP32019 993 aa15.45■□□□□ 0.06
SNX6-207ENST00000556303 RHBDL3P58872 404 aa15.45■□□□□ 0.06
SNX6-207ENST00000556303 ZNF384Q8TF68 577 aa15.45■□□□□ 0.06
SNX6-207ENST00000556303 DBNDD2Q9BQY9 259 aa15.45■□□□□ 0.06
SNX6-207ENST00000556303 RCAN3Q9UKA8 241 aa15.45■□□□□ 0.06
SNX6-207ENST00000556303 KCNH4Q9UQ05 1017 aa15.45■□□□□ 0.06
SNX6-207ENST00000556303 ATRNL1Q5VV63 1379 aa15.45■□□□□ 0.06
SNX6-207ENST00000556303 CENPFP49454 3210 aa15.45■□□□□ 0.06
SNX6-207ENST00000556303 PHF20L1A8MW92 1017 aa15.44■□□□□ 0.06
SNX6-207ENST00000556303 CXCL11O14625 94 aa15.44■□□□□ 0.06
SNX6-207ENST00000556303 HMMRO75330 724 aa15.44■□□□□ 0.06
SNX6-207ENST00000556303 SP3Q02447 781 aa15.44■□□□□ 0.06
SNX6-207ENST00000556303 TAF1CQ15572 869 aaPredicted RBP15.44■□□□□ 0.06
SNX6-207ENST00000556303 PI16Q6UXB8 463 aa15.44■□□□□ 0.06
SNX6-207ENST00000556303 PPP4R3CPQ6ZMV5 832 aa15.44■□□□□ 0.06
SNX6-207ENST00000556303 TBC1D9Q6ZT07 1266 aa15.44■□□□□ 0.06
SNX6-207ENST00000556303 ZSCAN29Q8IWY8 852 aaPredicted RBP15.44■□□□□ 0.06
SNX6-207ENST00000556303 ZFPM1Q8IX07 1006 aa15.44■□□□□ 0.06
SNX6-207ENST00000556303 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.44■□□□□ 0.06
SNX6-207ENST00000556303 NOL10Q9BSC4 688 aaKnown RBP15.44■□□□□ 0.06
SNX6-207ENST00000556303 ZBTB40Q9NUA8 1239 aa15.44■□□□□ 0.06
SNX6-207ENST00000556303 HPS5Q9UPZ3 1129 aa15.44■□□□□ 0.06
SNX6-207ENST00000556303 CTNND1O60716 968 aaKnown RBP15.43■□□□□ 0.06
SNX6-207ENST00000556303 PPP4CP60510 307 aa15.43■□□□□ 0.06
SNX6-207ENST00000556303 MLLT1Q03111 559 aaPredicted RBP15.43■□□□□ 0.06
SNX6-207ENST00000556303 PDE3AQ14432 1141 aa15.43■□□□□ 0.06
SNX6-207ENST00000556303 NAA16Q6N069 864 aaPredicted RBP15.43■□□□□ 0.06
SNX6-207ENST00000556303 CERS3Q8IU89 383 aa15.43■□□□□ 0.06
SNX6-207ENST00000556303 FAM43AQ8N2R8 423 aa15.43■□□□□ 0.06
SNX6-207ENST00000556303 EAF2Q96CJ1 260 aaPredicted RBP15.43■□□□□ 0.06
SNX6-207ENST00000556303 DDX4Q9NQI0 724 aaKnown RBP15.43■□□□□ 0.06
SNX6-207ENST00000556303 DBNLQ9UJU6 430 aaKnown RBP15.43■□□□□ 0.06
SNX6-207ENST00000556303 COL2A1P02458 1487 aaPredicted RBP15.43■□□□□ 0.06
SNX6-207ENST00000556303 DDTLA6NHG4 134 aaPredicted RBP15.42■□□□□ 0.06
SNX6-207ENST00000556303 TLR2O60603 784 aa15.42■□□□□ 0.06
SNX6-207ENST00000556303 CYP2E1P05181 493 aaPredicted RBP15.42■□□□□ 0.06
SNX6-207ENST00000556303 SH3BP5LQ7L8J4 393 aa15.42■□□□□ 0.06
SNX6-207ENST00000556303 OTOP1Q7RTM1 612 aa15.42■□□□□ 0.06
SNX6-207ENST00000556303 ANKRD23Q86SG2 305 aa15.42■□□□□ 0.06
SNX6-207ENST00000556303 SCYL3Q8IZE3 742 aa15.42■□□□□ 0.06
SNX6-207ENST00000556303 DHX36Q9H2U1 1008 aaKnown RBP15.42■□□□□ 0.06
SNX6-207ENST00000556303 PICK1Q9NRD5 415 aa15.42■□□□□ 0.06
SNX6-207ENST00000556303 BTBD19C9JJ37 291 aa15.41■□□□□ 0.06
SNX6-207ENST00000556303 PICALMQ13492 652 aa15.41■□□□□ 0.06
SNX6-207ENST00000556303 KIF1BPQ96EK5 621 aa15.41■□□□□ 0.06
SNX6-207ENST00000556303 TBC1D2Q9BYX2 928 aa15.41■□□□□ 0.06
SNX6-207ENST00000556303 CCDC8Q9H0W5 538 aaPredicted RBP15.41■□□□□ 0.06
SNX6-207ENST00000556303 OSBPL5Q9H0X9 879 aaPredicted RBP15.41■□□□□ 0.06
SNX6-207ENST00000556303 TRIM17Q9Y577 477 aa15.41■□□□□ 0.06
SNX6-207ENST00000556303 RAB11FIP3O75154 756 aa15.4■□□□□ 0.06
SNX6-207ENST00000556303 GNRH1P01148 92 aa15.4■□□□□ 0.06
SNX6-207ENST00000556303 PTPRAP18433 802 aa15.4■□□□□ 0.06
SNX6-207ENST00000556303 ZAP70P43403 619 aa15.4■□□□□ 0.06
SNX6-207ENST00000556303 FASTKD5Q7L8L6 764 aaKnown RBP15.4■□□□□ 0.06
SNX6-207ENST00000556303 TEX11Q8IYF3 940 aa15.4■□□□□ 0.06
SNX6-207ENST00000556303 CLASRPQ8N2M8 674 aaKnown RBP15.4■□□□□ 0.06
SNX6-207ENST00000556303 RHPN1Q8TCX5 695 aa15.4■□□□□ 0.06
SNX6-207ENST00000556303 EFCC1Q9HA90 598 aa15.4■□□□□ 0.06
SNX6-207ENST00000556303 SNRKQ9NRH2 765 aa15.4■□□□□ 0.06
SNX6-207ENST00000556303 HERC5Q9UII4 1024 aaKnown RBP15.4■□□□□ 0.06
SNX6-207ENST00000556303 EXOC6BQ9Y2D4 811 aa15.4■□□□□ 0.06
SNX6-207ENST00000556303 COG6Q9Y2V7 657 aa15.4■□□□□ 0.06
SNX6-207ENST00000556303 AACSQ86V21 672 aa15.39■□□□□ 0.05
SNX6-207ENST00000556303 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.39■□□□□ 0.05
SNX6-207ENST00000556303 PI4KBQ9UBF8 816 aa15.39■□□□□ 0.05
SNX6-207ENST00000556303 PTPN22Q9Y2R2 807 aa15.39■□□□□ 0.05
SNX6-207ENST00000556303 AFG3L2Q9Y4W6 797 aa15.39■□□□□ 0.05
SNX6-207ENST00000556303 PDE4DIPQ5VU43 2346 aa15.39■□□□□ 0.05
SNX6-207ENST00000556303 DOCK2Q92608 1830 aa15.38■□□□□ 0.05
SNX6-207ENST00000556303 TNRC18O15417 2968 aaPredicted RBP15.38■□□□□ 0.05
SNX6-207ENST00000556303 KIF22Q14807 665 aa15.38■□□□□ 0.05
SNX6-207ENST00000556303 TTF1Q15361 905 aaPredicted RBP15.38■□□□□ 0.05
SNX6-207ENST00000556303 CD99L2Q8TCZ2 262 aa15.38■□□□□ 0.05
SNX6-207ENST00000556303 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.38■□□□□ 0.05
SNX6-207ENST00000556303 AATFQ9NY61 560 aaKnown RBP eCLIP15.38■□□□□ 0.05
SNX6-207ENST00000556303 TLR7Q9NYK1 1049 aaKnown RBP15.38■□□□□ 0.05
SNX6-207ENST00000556303 SLC45A1Q9Y2W3 748 aa15.38■□□□□ 0.05
SNX6-207ENST00000556303 ZHX2Q9Y6X8 837 aa15.38■□□□□ 0.05
SNX6-207ENST00000556303 A0A0G2JLL6 359 aaPredicted RBP15.37■□□□□ 0.05
SNX6-207ENST00000556303 PDHXO00330 501 aa15.37■□□□□ 0.05
SNX6-207ENST00000556303 MAP3K12Q12852 859 aa15.37■□□□□ 0.05
SNX6-207ENST00000556303 MOGSQ13724 837 aa15.37■□□□□ 0.05
SNX6-207ENST00000556303 C17orf99Q6UX52 265 aa15.37■□□□□ 0.05
SNX6-207ENST00000556303 PRRT2Q7Z6L0 340 aaPredicted RBP15.37■□□□□ 0.05
SNX6-207ENST00000556303 METTL16Q86W50 562 aaKnown RBP15.37■□□□□ 0.05
SNX6-207ENST00000556303 FOXP4Q8IVH2 680 aaPredicted RBP15.37■□□□□ 0.05
SNX6-207ENST00000556303 SIRT2Q8IXJ6 389 aa15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms