RNA–Protein interactions for RNA: ENST00000556119.5

ABCD4-224, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 5

Gene ABCD4, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-224ENST00000556119 HHIPL2Q6UWX4 724 aa16.85■□□□□ 0.29
ABCD4-224ENST00000556119 TBC1D22AQ8WUA7 517 aa16.85■□□□□ 0.29
ABCD4-224ENST00000556119 AFG3L2Q9Y4W6 797 aa16.85■□□□□ 0.29
ABCD4-224ENST00000556119 BDP1A6H8Y1 2624 aa16.84■□□□□ 0.29
ABCD4-224ENST00000556119 PHF20L1A8MW92 1017 aa16.84■□□□□ 0.29
ABCD4-224ENST00000556119 EPHA10Q5JZY3 1008 aa16.84■□□□□ 0.29
ABCD4-224ENST00000556119 LMBR1LQ6UX01 489 aa16.84■□□□□ 0.29
ABCD4-224ENST00000556119 LINS1Q8NG48 757 aa16.84■□□□□ 0.29
ABCD4-224ENST00000556119 PTPRAP18433 802 aa16.83■□□□□ 0.28
ABCD4-224ENST00000556119 FAM110CQ1W6H9 321 aa16.83■□□□□ 0.28
ABCD4-224ENST00000556119 CCDC57Q2TAC2 916 aa16.83■□□□□ 0.28
ABCD4-224ENST00000556119 STK31Q9BXU1 1019 aa16.83■□□□□ 0.28
ABCD4-224ENST00000556119 TTYH1Q9H313 450 aaPredicted RBP16.83■□□□□ 0.28
ABCD4-224ENST00000556119 ADAMTS8Q9UP79 889 aa16.83■□□□□ 0.28
ABCD4-224ENST00000556119 SLC4A2P04920 1241 aa16.82■□□□□ 0.28
ABCD4-224ENST00000556119 NFIAQ12857 509 aa16.82■□□□□ 0.28
ABCD4-224ENST00000556119 TAF7LQ5H9L4 462 aa16.82■□□□□ 0.28
ABCD4-224ENST00000556119 MAP3K21Q5TCX8 1036 aa16.82■□□□□ 0.28
ABCD4-224ENST00000556119 DNAAF4Q8WXU2 420 aa16.82■□□□□ 0.28
ABCD4-224ENST00000556119 TRIB2Q92519 343 aa16.82■□□□□ 0.28
ABCD4-224ENST00000556119 FAM122AQ96E09 287 aa16.82■□□□□ 0.28
ABCD4-224ENST00000556119 PUS3Q9BZE2 481 aaKnown RBP16.82■□□□□ 0.28
ABCD4-224ENST00000556119 TJAP1Q5JTD0 557 aa16.81■□□□□ 0.28
ABCD4-224ENST00000556119 VPS37DQ86XT2 251 aa16.81■□□□□ 0.28
ABCD4-224ENST00000556119 SCYL3Q8IZE3 742 aa16.81■□□□□ 0.28
ABCD4-224ENST00000556119 LBHD1Q9BQE6 289 aaPredicted RBP16.81■□□□□ 0.28
ABCD4-224ENST00000556119 LTBP2Q14767 1821 aa16.81■□□□□ 0.28
ABCD4-224ENST00000556119 DOCK2Q92608 1830 aa16.81■□□□□ 0.28
ABCD4-224ENST00000556119 MAST2Q6P0Q8 1798 aa16.81■□□□□ 0.28
ABCD4-224ENST00000556119 ATRNL1Q5VV63 1379 aa16.8■□□□□ 0.28
ABCD4-224ENST00000556119 FRAT2O75474 233 aaPredicted RBP16.8■□□□□ 0.28
ABCD4-224ENST00000556119 TREML2Q5T2D2 321 aa16.8■□□□□ 0.28
ABCD4-224ENST00000556119 CDC42EP5Q6NZY7 148 aa16.8■□□□□ 0.28
ABCD4-224ENST00000556119 ZFPM1Q8IX07 1006 aa16.8■□□□□ 0.28
ABCD4-224ENST00000556119 PICK1Q9NRD5 415 aa16.8■□□□□ 0.28
ABCD4-224ENST00000556119 FAM198AQ9UFP1 575 aa16.8■□□□□ 0.28
ABCD4-224ENST00000556119 SUGT1Q9Y2Z0 365 aa16.8■□□□□ 0.28
ABCD4-224ENST00000556119 CACNA1FO60840 1977 aa16.8■□□□□ 0.28
ABCD4-224ENST00000556119 DOCK1Q14185 1865 aa16.8■□□□□ 0.28
ABCD4-224ENST00000556119 FRMPD3Q5JV73 1810 aa16.8■□□□□ 0.28
ABCD4-224ENST00000556119 MAST3O60307 1309 aa16.79■□□□□ 0.28
ABCD4-224ENST00000556119 PRKAR2AP13861 404 aaKnown RBP16.79■□□□□ 0.28
ABCD4-224ENST00000556119 FOSL2P15408 326 aa16.79■□□□□ 0.28
ABCD4-224ENST00000556119 HOXD11P31277 338 aaPredicted RBP16.79■□□□□ 0.28
ABCD4-224ENST00000556119 CALD1Q05682 793 aaKnown RBP16.79■□□□□ 0.28
ABCD4-224ENST00000556119 FLIIQ13045 1269 aa16.79■□□□□ 0.28
ABCD4-224ENST00000556119 SHHQ15465 462 aa16.79■□□□□ 0.28
ABCD4-224ENST00000556119 LHX8Q68G74 356 aa16.79■□□□□ 0.28
ABCD4-224ENST00000556119 AGTPBP1Q9UPW5 1226 aa16.79■□□□□ 0.28
ABCD4-224ENST00000556119 MYH13Q9UKX3 1938 aa16.78■□□□□ 0.28
ABCD4-224ENST00000556119 TRIM75PA6NK02 468 aa16.78■□□□□ 0.28
ABCD4-224ENST00000556119 WDR43Q15061 677 aaKnown RBP eCLIP16.78■□□□□ 0.28
ABCD4-224ENST00000556119 RALBP1Q15311 655 aa16.78■□□□□ 0.28
ABCD4-224ENST00000556119 SLURP2P0DP57 97 aa16.77■□□□□ 0.28
ABCD4-224ENST00000556119 CYP2B6P20813 491 aa16.77■□□□□ 0.28
ABCD4-224ENST00000556119 FKBP5Q13451 457 aaPredicted RBP16.77■□□□□ 0.28
ABCD4-224ENST00000556119 C9orf50Q5SZB4 431 aa16.77■□□□□ 0.28
ABCD4-224ENST00000556119 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.77■□□□□ 0.28
ABCD4-224ENST00000556119 DAGLAQ9Y4D2 1042 aa16.77■□□□□ 0.28
ABCD4-224ENST00000556119 TMEM265A0A087WTH1 108 aa16.76■□□□□ 0.27
ABCD4-224ENST00000556119 APAF1O14727 1248 aa16.76■□□□□ 0.27
ABCD4-224ENST00000556119 GCLCP48506 637 aaPredicted RBP16.76■□□□□ 0.27
ABCD4-224ENST00000556119 MAP3K10Q02779 954 aa16.76■□□□□ 0.27
ABCD4-224ENST00000556119 CACNB2Q08289 660 aaPredicted RBP16.76■□□□□ 0.27
ABCD4-224ENST00000556119 CAVIN4Q5BKX8 364 aa16.76■□□□□ 0.27
ABCD4-224ENST00000556119 CCDC84Q86UT8 332 aaPredicted RBP16.76■□□□□ 0.27
ABCD4-224ENST00000556119 USP38Q8NB14 1042 aa16.76■□□□□ 0.27
ABCD4-224ENST00000556119 LOC285556D6RIA3 1793 aa16.75■□□□□ 0.27
ABCD4-224ENST00000556119 CCND3P30281 292 aaPredicted RBP16.75■□□□□ 0.27
ABCD4-224ENST00000556119 SMAD3P84022 425 aaKnown RBP16.75■□□□□ 0.27
ABCD4-224ENST00000556119 DIXDC1Q155Q3 683 aa16.75■□□□□ 0.27
ABCD4-224ENST00000556119 TSR2Q969E8 191 aaKnown RBP16.75■□□□□ 0.27
ABCD4-224ENST00000556119 PNMA3Q9UL41 463 aa16.75■□□□□ 0.27
ABCD4-224ENST00000556119 MROH5Q6ZUA9 1318 aa16.74■□□□□ 0.27
ABCD4-224ENST00000556119 MAP3K12Q12852 859 aa16.74■□□□□ 0.27
ABCD4-224ENST00000556119 BEND3Q5T5X7 828 aa16.74■□□□□ 0.27
ABCD4-224ENST00000556119 SENP6Q9GZR1 1112 aaPredicted RBP16.74■□□□□ 0.27
ABCD4-224ENST00000556119 USP40Q9NVE5 1235 aa16.74■□□□□ 0.27
ABCD4-224ENST00000556119 LRRFIP2Q9Y608 721 aaKnown RBP16.74■□□□□ 0.27
ABCD4-224ENST00000556119 CTNND1O60716 968 aaKnown RBP16.73■□□□□ 0.27
ABCD4-224ENST00000556119 XRCC5P13010 732 aaKnown RBP16.73■□□□□ 0.27
ABCD4-224ENST00000556119 TWISTNBQ3B726 338 aaPredicted RBP16.73■□□□□ 0.27
ABCD4-224ENST00000556119 SH3BP5LQ7L8J4 393 aa16.73■□□□□ 0.27
ABCD4-224ENST00000556119 PROCA1Q8NCQ7 364 aaPredicted RBP16.73■□□□□ 0.27
ABCD4-224ENST00000556119 XIRP2A4UGR9 3374 aa16.73■□□□□ 0.27
ABCD4-224ENST00000556119 MYO9BQ13459 2157 aa16.72■□□□□ 0.27
ABCD4-224ENST00000556119 F6X3S4 739 aa16.72■□□□□ 0.27
ABCD4-224ENST00000556119 GRM8O00222 908 aa16.72■□□□□ 0.27
ABCD4-224ENST00000556119 ATN1P54259 1190 aaPredicted RBP16.72■□□□□ 0.27
ABCD4-224ENST00000556119 VGLL2Q8N8G2 317 aa16.72■□□□□ 0.27
ABCD4-224ENST00000556119 ASCC2Q9H1I8 757 aaPredicted RBP16.72■□□□□ 0.27
ABCD4-224ENST00000556119 SPINK5Q9NQ38 1064 aaPredicted RBP16.72■□□□□ 0.27
ABCD4-224ENST00000556119 MORF4L1Q9UBU8 362 aa16.72■□□□□ 0.27
ABCD4-224ENST00000556119 RLFQ13129 1914 aa16.72■□□□□ 0.27
ABCD4-224ENST00000556119 MYH2Q9UKX2 1941 aa16.71■□□□□ 0.27
ABCD4-224ENST00000556119 RGS3P49796 1198 aa16.71■□□□□ 0.27
ABCD4-224ENST00000556119 CCL14Q16627 93 aa16.71■□□□□ 0.27
ABCD4-224ENST00000556119 LRRC24Q50LG9 513 aa16.71■□□□□ 0.27
ABCD4-224ENST00000556119 NUDT12Q9BQG2 462 aa16.71■□□□□ 0.27
ABCD4-224ENST00000556119 PRKAG2Q9UGJ0 569 aa16.71■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms