RNA–Protein interactions for RNA: ENST00000554615.1

SEC23A-207, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 1 (best)

Gene SEC23A, Length 3,813 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-207ENST00000554615 AMPD2Q01433 879 aa4.04□□□□□ -1.76
SEC23A-207ENST00000554615 GABPB1Q06547 395 aaPredicted RBP4.04□□□□□ -1.76
SEC23A-207ENST00000554615 ENPEPQ07075 957 aa4.04□□□□□ -1.76
SEC23A-207ENST00000554615 CRY2Q49AN0 593 aa4.04□□□□□ -1.76
SEC23A-207ENST00000554615 E4F1Q66K89 784 aaPredicted RBP4.04□□□□□ -1.76
SEC23A-207ENST00000554615 PDXDC2PQ6P474 469 aa4.04□□□□□ -1.76
SEC23A-207ENST00000554615 SHC4Q6S5L8 630 aa4.04□□□□□ -1.76
SEC23A-207ENST00000554615 MPRIPQ6WCQ1 1025 aa4.04□□□□□ -1.76
SEC23A-207ENST00000554615 VSTM4Q8IW00 320 aa4.04□□□□□ -1.76
SEC23A-207ENST00000554615 KCTD17Q8N5Z5 321 aa4.04□□□□□ -1.76
SEC23A-207ENST00000554615 ZCRB1Q8TBF4 217 aaKnown RBP4.04□□□□□ -1.76
SEC23A-207ENST00000554615 ZNF507Q8TCN5 953 aa4.04□□□□□ -1.76
SEC23A-207ENST00000554615 KCNG4Q8TDN1 519 aa4.04□□□□□ -1.76
SEC23A-207ENST00000554615 PANX2Q96RD6 677 aa4.04□□□□□ -1.76
SEC23A-207ENST00000554615 DBNDD2Q9BQY9 259 aa4.04□□□□□ -1.76
SEC23A-207ENST00000554615 LIMA1Q9UHB6 759 aaKnown RBP4.04□□□□□ -1.76
SEC23A-207ENST00000554615 GAKO14976 1311 aa4.04□□□□□ -1.76
SEC23A-207ENST00000554615 FRMPD4Q14CM0 1322 aa4.04□□□□□ -1.76
SEC23A-207ENST00000554615 MYH11P35749 1972 aa4.04□□□□□ -1.76
SEC23A-207ENST00000554615 CCDC192P0DO97 292 aa4.04□□□□□ -1.76
SEC23A-207ENST00000554615 ERCC5P28715 1186 aaPredicted RBP4.04□□□□□ -1.76
SEC23A-207ENST00000554615 PRPHP41219 470 aa4.04□□□□□ -1.76
SEC23A-207ENST00000554615 TRAPPC10P48553 1259 aa4.04□□□□□ -1.76
SEC23A-207ENST00000554615 CLK2P49760 499 aaKnown RBP4.04□□□□□ -1.76
SEC23A-207ENST00000554615 TUBB4BP68371 445 aa4.04□□□□□ -1.76
SEC23A-207ENST00000554615 MAP3K11Q16584 847 aa4.04□□□□□ -1.76
SEC23A-207ENST00000554615 C1orf141Q5JVX7 400 aa4.04□□□□□ -1.76
SEC23A-207ENST00000554615 ARMCX5Q6P1M9 558 aa4.04□□□□□ -1.76
SEC23A-207ENST00000554615 EIF1ADQ8N9N8 165 aaKnown RBP4.04□□□□□ -1.76
SEC23A-207ENST00000554615 ENOX1Q8TC92 643 aaKnown RBP4.04□□□□□ -1.76
SEC23A-207ENST00000554615 PKNOX2Q96KN3 472 aa4.04□□□□□ -1.76
SEC23A-207ENST00000554615 MRIQ9BWK5 157 aa4.04□□□□□ -1.76
SEC23A-207ENST00000554615 KIAA1468Q9P260 1216 aa4.04□□□□□ -1.76
SEC23A-207ENST00000554615 PCDHA7Q9UN72 937 aa4.04□□□□□ -1.76
SEC23A-207ENST00000554615 PA2G4Q9UQ80 394 aaKnown RBP4.04□□□□□ -1.76
SEC23A-207ENST00000554615 SRPRBQ9Y5M8 271 aaKnown RBP4.04□□□□□ -1.76
SEC23A-207ENST00000554615 CNTNAP5Q8WYK1 1306 aa4.04□□□□□ -1.76
SEC23A-207ENST00000554615 A0A1W2PQJ5 194 aa4.04□□□□□ -1.76
SEC23A-207ENST00000554615 GSG1L2A8MUP6 293 aa4.04□□□□□ -1.76
SEC23A-207ENST00000554615 PRPF3O43395 683 aaKnown RBP4.04□□□□□ -1.76
SEC23A-207ENST00000554615 WDHD1O75717 1129 aaPredicted RBP4.04□□□□□ -1.76
SEC23A-207ENST00000554615 MYBP10242 640 aa4.04□□□□□ -1.76
SEC23A-207ENST00000554615 GSDMDP57764 484 aa4.04□□□□□ -1.76
SEC23A-207ENST00000554615 BLOC1S2Q6QNY1 142 aa4.04□□□□□ -1.76
SEC23A-207ENST00000554615 Q6ZUG5 572 aa4.04□□□□□ -1.76
SEC23A-207ENST00000554615 C11orf57Q6ZUT1 292 aaPredicted RBP4.04□□□□□ -1.76
SEC23A-207ENST00000554615 NOL8Q76FK4 1167 aaKnown RBP4.04□□□□□ -1.76
SEC23A-207ENST00000554615 CYB5R4Q7L1T6 521 aa4.04□□□□□ -1.76
SEC23A-207ENST00000554615 AACSQ86V21 672 aa4.04□□□□□ -1.76
SEC23A-207ENST00000554615 TBC1D10CQ8IV04 446 aa4.04□□□□□ -1.76
SEC23A-207ENST00000554615 CCAR2Q8N163 923 aaKnown RBP4.04□□□□□ -1.76
SEC23A-207ENST00000554615 FNBP4Q8N3X1 1017 aaPredicted RBP4.04□□□□□ -1.76
SEC23A-207ENST00000554615 BCL2L12Q9HB09 334 aa4.04□□□□□ -1.76
SEC23A-207ENST00000554615 STRN4Q9NRL3 753 aa4.04□□□□□ -1.76
SEC23A-207ENST00000554615 ZNF446Q9NWS9 450 aa4.04□□□□□ -1.76
SEC23A-207ENST00000554615 PODXL2Q9NZ53 605 aa4.04□□□□□ -1.76
SEC23A-207ENST00000554615 ESYT2A0FGR8 921 aa4.03□□□□□ -1.76
SEC23A-207ENST00000554615 FRMD3A2A2Y4 597 aa4.03□□□□□ -1.76
SEC23A-207ENST00000554615 PDE8AO60658 829 aa4.03□□□□□ -1.76
SEC23A-207ENST00000554615 DDAH1O94760 285 aa4.03□□□□□ -1.76
SEC23A-207ENST00000554615 PDE8BO95263 885 aa4.03□□□□□ -1.76
SEC23A-207ENST00000554615 MMP1P03956 469 aa4.03□□□□□ -1.76
SEC23A-207ENST00000554615 UQCRFS1P1P0C7P4 283 aa4.03□□□□□ -1.76
SEC23A-207ENST00000554615 MAP3K9P80192 1104 aa4.03□□□□□ -1.76
SEC23A-207ENST00000554615 DPYDQ12882 1025 aa4.03□□□□□ -1.76
SEC23A-207ENST00000554615 KCNB1Q14721 858 aa4.03□□□□□ -1.76
SEC23A-207ENST00000554615 MYSM1Q5VVJ2 828 aa4.03□□□□□ -1.76
SEC23A-207ENST00000554615 PRPF40BQ6NWY9 871 aaKnown RBP4.03□□□□□ -1.76
SEC23A-207ENST00000554615 UBE3BQ7Z3V4 1068 aa4.03□□□□□ -1.76
SEC23A-207ENST00000554615 FOXP4Q8IVH2 680 aaPredicted RBP4.03□□□□□ -1.76
SEC23A-207ENST00000554615 DRC7Q8IY82 874 aa4.03□□□□□ -1.76
SEC23A-207ENST00000554615 NFATC2IPQ8NCF5 419 aa4.03□□□□□ -1.76
SEC23A-207ENST00000554615 FBXO41Q8TF61 875 aa4.03□□□□□ -1.76
SEC23A-207ENST00000554615 PIGBQ92521 554 aa4.03□□□□□ -1.76
SEC23A-207ENST00000554615 JAKMIP1Q96N16 626 aaKnown RBP4.03□□□□□ -1.76
SEC23A-207ENST00000554615 UTP14AQ9BVJ6 771 aaKnown RBP4.03□□□□□ -1.76
SEC23A-207ENST00000554615 GNL3Q9BVP2 549 aaKnown RBP eCLIP4.03□□□□□ -1.76
SEC23A-207ENST00000554615 RNF26Q9BY78 433 aaPredicted RBP4.03□□□□□ -1.76
SEC23A-207ENST00000554615 ANO8Q9HCE9 1232 aaPredicted RBP4.03□□□□□ -1.76
SEC23A-207ENST00000554615 PATL2C9JE40 543 aaKnown RBP4.03□□□□□ -1.76
SEC23A-207ENST00000554615 CES2O00748 559 aa4.03□□□□□ -1.76
SEC23A-207ENST00000554615 AARSP49588 968 aaKnown RBP eCLIP4.03□□□□□ -1.76
SEC23A-207ENST00000554615 SCARF1Q14162 830 aa4.03□□□□□ -1.76
SEC23A-207ENST00000554615 PARP10Q53GL7 1025 aa4.03□□□□□ -1.76
SEC23A-207ENST00000554615 TSHZ3Q63HK5 1081 aa4.03□□□□□ -1.76
SEC23A-207ENST00000554615 CCAR1Q8IX12 1150 aaKnown RBP4.03□□□□□ -1.76
SEC23A-207ENST00000554615 PDCL2Q8N4E4 241 aa4.03□□□□□ -1.76
SEC23A-207ENST00000554615 USHBP1Q8N6Y0 703 aa4.03□□□□□ -1.76
SEC23A-207ENST00000554615 CCDC150Q8NCX0 1101 aa4.03□□□□□ -1.76
SEC23A-207ENST00000554615 MAGEF1Q9HAY2 307 aa4.03□□□□□ -1.76
SEC23A-207ENST00000554615 ATRNL1Q5VV63 1379 aa4.03□□□□□ -1.76
SEC23A-207ENST00000554615 A0A0G2JLW4 131 aa4.03□□□□□ -1.76
SEC23A-207ENST00000554615 PTPDC1A2A3K4 754 aa4.03□□□□□ -1.76
SEC23A-207ENST00000554615 RASSF10A6NK89 507 aa4.03□□□□□ -1.76
SEC23A-207ENST00000554615 MUM1L1Q5H9M0 696 aa4.03□□□□□ -1.76
SEC23A-207ENST00000554615 SAMD1Q6SPF0 538 aaPredicted RBP4.03□□□□□ -1.76
SEC23A-207ENST00000554615 TTLL7Q6ZT98 887 aa4.03□□□□□ -1.76
SEC23A-207ENST00000554615 KIAA1211Q6ZU35 1233 aa4.03□□□□□ -1.76
SEC23A-207ENST00000554615 NAA15Q9BXJ9 866 aaKnown RBP4.03□□□□□ -1.76
SEC23A-207ENST00000554615 PIH1D3Q9NQM4 214 aaKnown RBP4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms