RNA–Protein interactions for RNA: ENST00000553444.1

HNRNPC-206, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 724 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-206ENST00000553444 PTPRAP18433 802 aa14.67□□□□□ -0.06
HNRNPC-206ENST00000553444 USP40Q9NVE5 1235 aa14.67□□□□□ -0.06
HNRNPC-206ENST00000553444 AFG3L2Q9Y4W6 797 aa14.67□□□□□ -0.06
HNRNPC-206ENST00000553444 COL6A3P12111 3177 aa14.67□□□□□ -0.06
HNRNPC-206ENST00000553444 TNPO2O14787 897 aaKnown RBP14.66□□□□□ -0.06
HNRNPC-206ENST00000553444 SLC5A1P13866 664 aa14.66□□□□□ -0.06
HNRNPC-206ENST00000553444 ZEB1P37275 1124 aaPredicted RBP14.66□□□□□ -0.06
HNRNPC-206ENST00000553444 GADL1Q6ZQY3 521 aa14.66□□□□□ -0.06
HNRNPC-206ENST00000553444 LPIN2Q92539 896 aa14.66□□□□□ -0.06
HNRNPC-206ENST00000553444 PICK1Q9NRD5 415 aa14.66□□□□□ -0.06
HNRNPC-206ENST00000553444 EYA2O00167 538 aa14.65□□□□□ -0.06
HNRNPC-206ENST00000553444 RFX5P48382 616 aaPredicted RBP14.65□□□□□ -0.06
HNRNPC-206ENST00000553444 SH3BP5LQ7L8J4 393 aa14.65□□□□□ -0.06
HNRNPC-206ENST00000553444 SMCR8Q8TEV9 937 aaPredicted RBP14.65□□□□□ -0.06
HNRNPC-206ENST00000553444 DIS3LQ8TF46 1054 aaKnown RBP14.65□□□□□ -0.06
HNRNPC-206ENST00000553444 PAWRQ96IZ0 340 aaKnown RBP14.65□□□□□ -0.06
HNRNPC-206ENST00000553444 GDF15Q99988 308 aa14.65□□□□□ -0.06
HNRNPC-206ENST00000553444 IDI2Q9BXS1 227 aa14.65□□□□□ -0.06
HNRNPC-206ENST00000553444 RFX7Q2KHR2 1363 aa14.64□□□□□ -0.07
HNRNPC-206ENST00000553444 ENTPD3O75355 529 aa14.64□□□□□ -0.07
HNRNPC-206ENST00000553444 LDHBP07195 334 aaKnown RBP14.64□□□□□ -0.07
HNRNPC-206ENST00000553444 BMP8BP34820 402 aa14.64□□□□□ -0.07
HNRNPC-206ENST00000553444 RGS3P49796 1198 aa14.64□□□□□ -0.07
HNRNPC-206ENST00000553444 MNX1P50219 401 aaPredicted RBP14.64□□□□□ -0.07
HNRNPC-206ENST00000553444 MAP3K10Q02779 954 aa14.64□□□□□ -0.07
HNRNPC-206ENST00000553444 GPR153Q6NV75 609 aa14.64□□□□□ -0.07
HNRNPC-206ENST00000553444 PPP4R3CPQ6ZMV5 832 aa14.64□□□□□ -0.07
HNRNPC-206ENST00000553444 NECAB2Q7Z6G3 386 aa14.64□□□□□ -0.07
HNRNPC-206ENST00000553444 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.64□□□□□ -0.072e-28■■■■■ 30.3
HNRNPC-206ENST00000553444 SALL1Q9NSC2 1324 aa14.64□□□□□ -0.07
HNRNPC-206ENST00000553444 SLURP2P0DP57 97 aa14.63□□□□□ -0.07
HNRNPC-206ENST00000553444 FAM110CQ1W6H9 321 aa14.63□□□□□ -0.07
HNRNPC-206ENST00000553444 ANKRD13CQ8N6S4 541 aa14.63□□□□□ -0.07
HNRNPC-206ENST00000553444 COA7Q96BR5 231 aa14.63□□□□□ -0.07
HNRNPC-206ENST00000553444 USP44Q9H0E7 712 aa14.63□□□□□ -0.07
HNRNPC-206ENST00000553444 TAOK2Q9UL54 1235 aa14.63□□□□□ -0.07
HNRNPC-206ENST00000553444 AGTPBP1Q9UPW5 1226 aa14.63□□□□□ -0.07
HNRNPC-206ENST00000553444 GAKO14976 1311 aa14.63□□□□□ -0.07
HNRNPC-206ENST00000553444 TRIM75PA6NK02 468 aa14.62□□□□□ -0.07
HNRNPC-206ENST00000553444 CTNND1O60716 968 aaKnown RBP14.62□□□□□ -0.07
HNRNPC-206ENST00000553444 ATG9AQ7Z3C6 839 aa14.62□□□□□ -0.07
HNRNPC-206ENST00000553444 C7orf61Q8IZ16 206 aa14.62□□□□□ -0.07
HNRNPC-206ENST00000553444 ANKLE1Q8NAG6 615 aa14.62□□□□□ -0.07
HNRNPC-206ENST00000553444 MRS2Q9HD23 443 aa14.62□□□□□ -0.07
HNRNPC-206ENST00000553444 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.62□□□□□ -0.07
HNRNPC-206ENST00000553444 ZMYND8Q9ULU4 1186 aaPredicted RBP14.62□□□□□ -0.07
HNRNPC-206ENST00000553444 LRRFIP2Q9Y608 721 aaKnown RBP14.62□□□□□ -0.07
HNRNPC-206ENST00000553444 DDTLA6NHG4 134 aaPredicted RBP14.61□□□□□ -0.07
HNRNPC-206ENST00000553444 ATP2B3Q16720 1220 aa14.61□□□□□ -0.07
HNRNPC-206ENST00000553444 LRIT3Q3SXY7 679 aa14.61□□□□□ -0.07
HNRNPC-206ENST00000553444 TREML2Q5T2D2 321 aa14.61□□□□□ -0.07
HNRNPC-206ENST00000553444 CCDC84Q86UT8 332 aaPredicted RBP14.61□□□□□ -0.07
HNRNPC-206ENST00000553444 ZSCAN29Q8IWY8 852 aaPredicted RBP14.61□□□□□ -0.07
HNRNPC-206ENST00000553444 MRPL50Q8N5N7 158 aaKnown RBP14.61□□□□□ -0.07
HNRNPC-206ENST00000553444 DEFB123Q8N688 67 aa14.61□□□□□ -0.07
HNRNPC-206ENST00000553444 DDX4Q9NQI0 724 aaKnown RBP14.61□□□□□ -0.07
HNRNPC-206ENST00000553444 GNL3LQ9NVN8 582 aaKnown RBP14.61□□□□□ -0.07
HNRNPC-206ENST00000553444 DENND2AQ9ULE3 1009 aa14.61□□□□□ -0.07
HNRNPC-206ENST00000553444 SEMA3EO15041 775 aa14.6□□□□□ -0.07
HNRNPC-206ENST00000553444 ZBTB22O15209 634 aa14.6□□□□□ -0.07
HNRNPC-206ENST00000553444 HMGCRP04035 888 aa14.6□□□□□ -0.07
HNRNPC-206ENST00000553444 PHKA1P46020 1223 aa14.6□□□□□ -0.07
HNRNPC-206ENST00000553444 Q7L0L9 218 aa14.6□□□□□ -0.07
HNRNPC-206ENST00000553444 PNMA3Q9UL41 463 aa14.6□□□□□ -0.07
HNRNPC-206ENST00000553444 STXBP5LQ9Y2K9 1186 aa14.6□□□□□ -0.07
HNRNPC-206ENST00000553444 MAGEA10P43363 369 aaPredicted RBP14.59□□□□□ -0.07
HNRNPC-206ENST00000553444 FAM163AQ96GL9 167 aaPredicted RBP14.59□□□□□ -0.07
HNRNPC-206ENST00000553444 NBPF3Q9H094 633 aa14.59□□□□□ -0.07
HNRNPC-206ENST00000553444 CACNA1FO60840 1977 aa14.59□□□□□ -0.07
HNRNPC-206ENST00000553444 PTPRCP08575 1304 aa14.59□□□□□ -0.07
HNRNPC-206ENST00000553444 CIAO1O76071 339 aa14.58□□□□□ -0.08
HNRNPC-206ENST00000553444 TRIM32Q13049 653 aa14.58□□□□□ -0.08
HNRNPC-206ENST00000553444 PICALMQ13492 652 aa14.58□□□□□ -0.08
HNRNPC-206ENST00000553444 ZGPATQ8N5A5 531 aaKnown RBP14.58□□□□□ -0.08
HNRNPC-206ENST00000553444 PROCA1Q8NCQ7 364 aaPredicted RBP14.58□□□□□ -0.08
HNRNPC-206ENST00000553444 C11orf49Q9H6J7 331 aa14.58□□□□□ -0.08
HNRNPC-206ENST00000553444 MTMR10Q9NXD2 777 aa14.58□□□□□ -0.08
HNRNPC-206ENST00000553444 CEP126Q9P2H0 1117 aa14.58□□□□□ -0.08
HNRNPC-206ENST00000553444 FBXO3Q9UK99 471 aa14.58□□□□□ -0.08
HNRNPC-206ENST00000553444 GJD2Q9UKL4 321 aa14.58□□□□□ -0.08
HNRNPC-206ENST00000553444 RPTORQ8N122 1335 aa14.58□□□□□ -0.08
HNRNPC-206ENST00000553444 TBC1D12O60347 775 aa14.57□□□□□ -0.08
HNRNPC-206ENST00000553444 SYN1P17600 705 aa14.57□□□□□ -0.08
HNRNPC-206ENST00000553444 BTDP43251 543 aa14.57□□□□□ -0.08
HNRNPC-206ENST00000553444 GCLCP48506 637 aaPredicted RBP14.57□□□□□ -0.08
HNRNPC-206ENST00000553444 DZIP1Q86YF9 867 aaKnown RBP14.57□□□□□ -0.08
HNRNPC-206ENST00000553444 TDHQ8IZJ6 230 aa14.57□□□□□ -0.08
HNRNPC-206ENST00000553444 SIL1Q9H173 461 aa14.57□□□□□ -0.08
HNRNPC-206ENST00000553444 HMX1Q9NP08 348 aaPredicted RBP14.57□□□□□ -0.08
HNRNPC-206ENST00000553444 OGDHLQ9ULD0 1010 aa14.57□□□□□ -0.08
HNRNPC-206ENST00000553444 ADORA1P30542 326 aa14.56□□□□□ -0.08
HNRNPC-206ENST00000553444 RHBDL3P58872 404 aa14.56□□□□□ -0.08
HNRNPC-206ENST00000553444 SPP2Q13103 211 aa14.56□□□□□ -0.08
HNRNPC-206ENST00000553444 RASGRF1Q13972 1273 aa14.56□□□□□ -0.08
HNRNPC-206ENST00000553444 CCDC102BQ68D86 513 aa14.56□□□□□ -0.08
HNRNPC-206ENST00000553444 TRIB2Q92519 343 aa14.56□□□□□ -0.08
HNRNPC-206ENST00000553444 FAM196BA6NMK8 535 aa14.55□□□□□ -0.08
HNRNPC-206ENST00000553444 NPM3O75607 178 aaKnown RBP14.55□□□□□ -0.08
HNRNPC-206ENST00000553444 HMGCS2P54868 508 aa14.55□□□□□ -0.08
HNRNPC-206ENST00000553444 MAP3K21Q5TCX8 1036 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms