RNA–Protein interactions for RNA: ENST00000553300.5

HNRNPC-205, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-205ENST00000553300 PLCG2P16885 1265 aa16.07■□□□□ 0.16
HNRNPC-205ENST00000553300 PPATQ06203 517 aa16.07■□□□□ 0.16
HNRNPC-205ENST00000553300 DGKZQ13574 1117 aa16.07■□□□□ 0.16
HNRNPC-205ENST00000553300 NAA16Q6N069 864 aaPredicted RBP16.07■□□□□ 0.16
HNRNPC-205ENST00000553300 ZSCAN29Q8IWY8 852 aaPredicted RBP16.07■□□□□ 0.16
HNRNPC-205ENST00000553300 SIRT2Q8IXJ6 389 aa16.07■□□□□ 0.16
HNRNPC-205ENST00000553300 ZKSCAN4Q969J2 545 aaPredicted RBP16.07■□□□□ 0.16
HNRNPC-205ENST00000553300 MS4A4AQ96JQ5 239 aa16.07■□□□□ 0.16
HNRNPC-205ENST00000553300 SNCAIPQ9Y6H5 919 aa16.07■□□□□ 0.16
HNRNPC-205ENST00000553300 IGF2BP3O00425 579 aaKnown RBP eCLIP16.06■□□□□ 0.16
HNRNPC-205ENST00000553300 ZAP70P43403 619 aa16.06■□□□□ 0.16
HNRNPC-205ENST00000553300 MAP3K10Q02779 954 aa16.06■□□□□ 0.16
HNRNPC-205ENST00000553300 PPIL2Q13356 520 aa16.06■□□□□ 0.16
HNRNPC-205ENST00000553300 C20orf194Q5TEA3 1177 aa16.06■□□□□ 0.16
HNRNPC-205ENST00000553300 CTU1Q7Z7A3 348 aaKnown RBP16.06■□□□□ 0.16
HNRNPC-205ENST00000553300 ZFPM1Q8IX07 1006 aa16.06■□□□□ 0.16
HNRNPC-205ENST00000553300 ZNF296Q8WUU4 475 aaPredicted RBP16.06■□□□□ 0.16
HNRNPC-205ENST00000553300 OTUD5Q96G74 571 aa16.06■□□□□ 0.16
HNRNPC-205ENST00000553300 MCOLN1Q9GZU1 580 aa16.06■□□□□ 0.16
HNRNPC-205ENST00000553300 TLR7Q9NYK1 1049 aaKnown RBP16.06■□□□□ 0.16
HNRNPC-205ENST00000553300 FKTNO75072 461 aa16.05■□□□□ 0.16
HNRNPC-205ENST00000553300 CETPP11597 493 aa16.05■□□□□ 0.16
HNRNPC-205ENST00000553300 PPP4CP60510 307 aa16.05■□□□□ 0.16
HNRNPC-205ENST00000553300 SNAPC2Q13487 334 aa16.05■□□□□ 0.16
HNRNPC-205ENST00000553300 PICALMQ13492 652 aa16.05■□□□□ 0.16
HNRNPC-205ENST00000553300 PKN2Q16513 984 aaKnown RBP16.05■□□□□ 0.16
HNRNPC-205ENST00000553300 NOL9Q5SY16 702 aaKnown RBP16.05■□□□□ 0.16
HNRNPC-205ENST00000553300 CERS3Q8IU89 383 aa16.05■□□□□ 0.16
HNRNPC-205ENST00000553300 IL1RAPL2Q9NP60 686 aa16.05■□□□□ 0.16
HNRNPC-205ENST00000553300 ATRNL1Q5VV63 1379 aa16.04■□□□□ 0.16
HNRNPC-205ENST00000553300 CCL15-CCL14A0A0B4J2E2 113 aa16.04■□□□□ 0.16
HNRNPC-205ENST00000553300 TBC1D12O60347 775 aa16.04■□□□□ 0.16
HNRNPC-205ENST00000553300 IFIT2P09913 472 aaKnown RBP16.04■□□□□ 0.16
HNRNPC-205ENST00000553300 INPP5BP32019 993 aa16.04■□□□□ 0.16
HNRNPC-205ENST00000553300 CCL15Q16663 113 aa16.04■□□□□ 0.16
HNRNPC-205ENST00000553300 TEX11Q8IYF3 940 aa16.04■□□□□ 0.16
HNRNPC-205ENST00000553300 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.04■□□□□ 0.16
HNRNPC-205ENST00000553300 PTPN18Q99952 460 aa16.04■□□□□ 0.16
HNRNPC-205ENST00000553300 ZCCHC17Q9NP64 241 aaKnown RBP16.04■□□□□ 0.16
HNRNPC-205ENST00000553300 DDX4Q9NQI0 724 aaKnown RBP16.04■□□□□ 0.16
HNRNPC-205ENST00000553300 DDTLA6NHG4 134 aaPredicted RBP16.03■□□□□ 0.16
HNRNPC-205ENST00000553300 IRF6O14896 467 aa16.03■□□□□ 0.16
HNRNPC-205ENST00000553300 MAP3K12Q12852 859 aa16.03■□□□□ 0.16
HNRNPC-205ENST00000553300 TTF1Q15361 905 aaPredicted RBP16.03■□□□□ 0.16
HNRNPC-205ENST00000553300 SH3BP5LQ7L8J4 393 aa16.03■□□□□ 0.16
HNRNPC-205ENST00000553300 CNKSR2Q8WXI2 1034 aa16.03■□□□□ 0.16
HNRNPC-205ENST00000553300 DHX36Q9H2U1 1008 aaKnown RBP16.03■□□□□ 0.16
HNRNPC-205ENST00000553300 COL2A1P02458 1487 aaPredicted RBP16.03■□□□□ 0.16
HNRNPC-205ENST00000553300 DOCK2Q92608 1830 aa16.03■□□□□ 0.16
HNRNPC-205ENST00000553300 MAST2Q6P0Q8 1798 aa16.03■□□□□ 0.16
HNRNPC-205ENST00000553300 PHF20L1A8MW92 1017 aa16.02■□□□□ 0.16
HNRNPC-205ENST00000553300 CTNND1O60716 968 aaKnown RBP16.02■□□□□ 0.16
HNRNPC-205ENST00000553300 IDH1O75874 414 aaKnown RBP16.02■□□□□ 0.16
HNRNPC-205ENST00000553300 BRI3BPQ8WY22 251 aa16.02■□□□□ 0.16
HNRNPC-205ENST00000553300 OSBPL5Q9H0X9 879 aaPredicted RBP16.02■□□□□ 0.16
HNRNPC-205ENST00000553300 PIH1D3Q9NQM4 214 aaKnown RBP16.02■□□□□ 0.16
HNRNPC-205ENST00000553300 PICK1Q9NRD5 415 aa16.02■□□□□ 0.16
HNRNPC-205ENST00000553300 AATFQ9NY61 560 aaKnown RBP eCLIP16.02■□□□□ 0.16
HNRNPC-205ENST00000553300 APBB1O00213 710 aa16.01■□□□□ 0.15
HNRNPC-205ENST00000553300 CRHR2Q13324 411 aa16.01■□□□□ 0.15
HNRNPC-205ENST00000553300 SCYL3Q8IZE3 742 aa16.01■□□□□ 0.15
HNRNPC-205ENST00000553300 SH3RF3Q8TEJ3 882 aaPredicted RBP16.01■□□□□ 0.15
HNRNPC-205ENST00000553300 R3HDMLQ9H3Y0 253 aa16.01■□□□□ 0.15
HNRNPC-205ENST00000553300 ZFYVE28Q9HCC9 887 aa16.01■□□□□ 0.15
HNRNPC-205ENST00000553300 KCNH4Q9UQ05 1017 aa16.01■□□□□ 0.15
HNRNPC-205ENST00000553300 CXCL11O14625 94 aa16■□□□□ 0.15
HNRNPC-205ENST00000553300 CYP7A1P22680 504 aa16■□□□□ 0.15
HNRNPC-205ENST00000553300 LRRCC1Q9C099 1032 aa16■□□□□ 0.15
HNRNPC-205ENST00000553300 PI4KBQ9UBF8 816 aa16■□□□□ 0.15
HNRNPC-205ENST00000553300 MYO5AQ9Y4I1 1855 aaKnown RBP16■□□□□ 0.15
HNRNPC-205ENST00000553300 CCDC85CA6NKD9 419 aa16■□□□□ 0.15
HNRNPC-205ENST00000553300 TAF1CQ15572 869 aaPredicted RBP16■□□□□ 0.15
HNRNPC-205ENST00000553300 ERO1AQ96HE7 468 aa16■□□□□ 0.15
HNRNPC-205ENST00000553300 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16■□□□□ 0.15
HNRNPC-205ENST00000553300 HERC5Q9UII4 1024 aaKnown RBP16■□□□□ 0.15
HNRNPC-205ENST00000553300 PTPRAP18433 802 aa15.99■□□□□ 0.15
HNRNPC-205ENST00000553300 RRP1P56182 461 aaKnown RBP15.99■□□□□ 0.15
HNRNPC-205ENST00000553300 SP3Q02447 781 aa15.99■□□□□ 0.15
HNRNPC-205ENST00000553300 ARHGEF6Q15052 776 aa15.99■□□□□ 0.15
HNRNPC-205ENST00000553300 ADGRA1Q86SQ6 560 aa15.99■□□□□ 0.15
HNRNPC-205ENST00000553300 FOXP4Q8IVH2 680 aaPredicted RBP15.99■□□□□ 0.15
HNRNPC-205ENST00000553300 FAM43AQ8N2R8 423 aa15.99■□□□□ 0.15
HNRNPC-205ENST00000553300 MAGEB6Q8N7X4 407 aa15.99■□□□□ 0.15
HNRNPC-205ENST00000553300 TGFBRAP1Q8WUH2 860 aa15.99■□□□□ 0.15
HNRNPC-205ENST00000553300 ANTXR1Q9H6X2 564 aa15.99■□□□□ 0.15
HNRNPC-205ENST00000553300 BTBD19C9JJ37 291 aa15.98■□□□□ 0.15
HNRNPC-205ENST00000553300 ATP5JP18859 108 aa15.98■□□□□ 0.15
HNRNPC-205ENST00000553300 ANKRD23Q86SG2 305 aa15.98■□□□□ 0.15
HNRNPC-205ENST00000553300 TBC1D2Q9BYX2 928 aa15.98■□□□□ 0.15
HNRNPC-205ENST00000553300 DCTPP1Q9H773 170 aa15.98■□□□□ 0.15
HNRNPC-205ENST00000553300 ZHX2Q9Y6X8 837 aa15.98■□□□□ 0.15
HNRNPC-205ENST00000553300 FLT1P17948 1338 aa15.97■□□□□ 0.15
HNRNPC-205ENST00000553300 FBXO46Q6PJ61 603 aaPredicted RBP15.97■□□□□ 0.15
HNRNPC-205ENST00000553300 FASTKD5Q7L8L6 764 aaKnown RBP15.97■□□□□ 0.15
HNRNPC-205ENST00000553300 METTL16Q86W50 562 aaKnown RBP15.97■□□□□ 0.15
HNRNPC-205ENST00000553300 MAPKAPK5Q8IW41 473 aa15.97■□□□□ 0.15
HNRNPC-205ENST00000553300 YTHDC1Q96MU7 727 aaKnown RBP15.97■□□□□ 0.15
HNRNPC-205ENST00000553300 NDUFB9Q9Y6M9 179 aa15.97■□□□□ 0.15
HNRNPC-205ENST00000553300 TLR2O60603 784 aa15.96■□□□□ 0.15
HNRNPC-205ENST00000553300 SLC9C2Q5TAH2 1124 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms