RNA–Protein interactions for RNA: ENST00000552960.5

HDAC7-230, Transcript of histone deacetylase 7, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene HDAC7, Length 3,216 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-230ENST00000552960 TRIM28Q13263 835 aaKnown RBP14.22□□□□□ -0.13
HDAC7-230ENST00000552960 ATL3Q6DD88 541 aa14.22□□□□□ -0.13
HDAC7-230ENST00000552960 AFF2P51816 1311 aa14.22□□□□□ -0.13
HDAC7-230ENST00000552960 A0A1B0GUL7 405 aa14.22□□□□□ -0.13
HDAC7-230ENST00000552960 KIF28PB7ZC32 967 aa14.22□□□□□ -0.13
HDAC7-230ENST00000552960 PRC1O43663 620 aa14.22□□□□□ -0.13
HDAC7-230ENST00000552960 CAMTA2O94983 1202 aa14.22□□□□□ -0.13
HDAC7-230ENST00000552960 ANO1Q5XXA6 986 aa14.22□□□□□ -0.13
HDAC7-230ENST00000552960 RALYLQ86SE5 291 aaKnown RBP14.22□□□□□ -0.13
HDAC7-230ENST00000552960 CLIC6Q96NY7 704 aa14.22□□□□□ -0.13
HDAC7-230ENST00000552960 SEC31BQ9NQW1 1179 aa14.22□□□□□ -0.13
HDAC7-230ENST00000552960 MAST3O60307 1309 aa14.21□□□□□ -0.13
HDAC7-230ENST00000552960 NCAPHQ15003 741 aa14.21□□□□□ -0.13
HDAC7-230ENST00000552960 FBXO18Q8NFZ0 1043 aa14.21□□□□□ -0.13
HDAC7-230ENST00000552960 ZNF274Q96GC6 653 aaPredicted RBP14.21□□□□□ -0.13
HDAC7-230ENST00000552960 A0A1W2PQ27 194 aa14.21□□□□□ -0.13
HDAC7-230ENST00000552960 A0A1W2PQ64 194 aa14.21□□□□□ -0.13
HDAC7-230ENST00000552960 A0A1W2PQD8 194 aa14.21□□□□□ -0.13
HDAC7-230ENST00000552960 M0R2C6 588 aa14.21□□□□□ -0.13
HDAC7-230ENST00000552960 WDHD1O75717 1129 aaPredicted RBP14.21□□□□□ -0.13
HDAC7-230ENST00000552960 TNNT3P45378 269 aaPredicted RBP14.21□□□□□ -0.13
HDAC7-230ENST00000552960 SCARF1Q14162 830 aa14.21□□□□□ -0.13
HDAC7-230ENST00000552960 KARSQ15046 597 aaKnown RBP14.21□□□□□ -0.13
HDAC7-230ENST00000552960 CCDC93Q567U6 631 aa14.21□□□□□ -0.13
HDAC7-230ENST00000552960 OLFM4Q6UX06 510 aa14.21□□□□□ -0.13
HDAC7-230ENST00000552960 ZNF34Q8IZ26 560 aa14.21□□□□□ -0.13
HDAC7-230ENST00000552960 FANCLQ9NW38 375 aa14.21□□□□□ -0.13
HDAC7-230ENST00000552960 WTIPA6NIX2 430 aaPredicted RBP14.2□□□□□ -0.14
HDAC7-230ENST00000552960 CSF1RP07333 972 aa14.2□□□□□ -0.14
HDAC7-230ENST00000552960 ADKP55263 362 aaKnown RBP14.2□□□□□ -0.14
HDAC7-230ENST00000552960 ST5P78524 1137 aa14.2□□□□□ -0.14
HDAC7-230ENST00000552960 DSCC1Q9BVC3 393 aa14.2□□□□□ -0.14
HDAC7-230ENST00000552960 SRP68Q9UHB9 627 aaKnown RBP14.2□□□□□ -0.14
HDAC7-230ENST00000552960 NIP7Q9Y221 180 aaKnown RBP eCLIP14.2□□□□□ -0.14
HDAC7-230ENST00000552960 ATP2B1P20020 1258 aa14.2□□□□□ -0.14
HDAC7-230ENST00000552960 IFIT5Q13325 482 aaKnown RBP14.2□□□□□ -0.14
HDAC7-230ENST00000552960 OSBP2Q969R2 916 aa14.2□□□□□ -0.14
HDAC7-230ENST00000552960 DESI2Q9BSY9 194 aa14.2□□□□□ -0.14
HDAC7-230ENST00000552960 HELLSQ9NRZ9 838 aa14.2□□□□□ -0.14
HDAC7-230ENST00000552960 DHX16O60231 1041 aaKnown RBP14.2□□□□□ -0.14
HDAC7-230ENST00000552960 CASQ1P31415 396 aa14.2□□□□□ -0.14
HDAC7-230ENST00000552960 CYP2C19P33261 490 aa14.2□□□□□ -0.14
HDAC7-230ENST00000552960 CTSWP56202 376 aa14.2□□□□□ -0.14
HDAC7-230ENST00000552960 GJD4Q96KN9 370 aaPredicted RBP14.2□□□□□ -0.14
HDAC7-230ENST00000552960 SRCAPQ6ZRS2 3230 aa14.2□□□□□ -0.14
HDAC7-230ENST00000552960 MROH7-TTC4A0A0A0MT08 1334 aa14.19□□□□□ -0.14
HDAC7-230ENST00000552960 RNF113AO15541 343 aaKnown RBP14.19□□□□□ -0.14
HDAC7-230ENST00000552960 APPP05067 770 aa14.19□□□□□ -0.14
HDAC7-230ENST00000552960 IL15P40933 162 aaPredicted RBP14.19□□□□□ -0.14
HDAC7-230ENST00000552960 MYL5Q02045 173 aa14.19□□□□□ -0.14
HDAC7-230ENST00000552960 IMMTQ16891 758 aaKnown RBP14.19□□□□□ -0.14
HDAC7-230ENST00000552960 ZMYM1Q5SVZ6 1142 aa14.19□□□□□ -0.14
HDAC7-230ENST00000552960 LDHAL6AQ6ZMR3 332 aa14.19□□□□□ -0.14
HDAC7-230ENST00000552960 C3orf67Q6ZVT6 689 aa14.19□□□□□ -0.14
HDAC7-230ENST00000552960 FAM53CQ9NYF3 392 aa14.19□□□□□ -0.14
HDAC7-230ENST00000552960 SH3TC1Q8TE82 1336 aa14.19□□□□□ -0.14
HDAC7-230ENST00000552960 SALL1Q9NSC2 1324 aa14.19□□□□□ -0.14
HDAC7-230ENST00000552960 NWD2Q9ULI1 1742 aa14.19□□□□□ -0.14
HDAC7-230ENST00000552960 FANCGO15287 622 aa14.19□□□□□ -0.14
HDAC7-230ENST00000552960 CCP110O43303 1012 aa14.19□□□□□ -0.14
HDAC7-230ENST00000552960 OAS2P29728 719 aaKnown RBP14.19□□□□□ -0.14
HDAC7-230ENST00000552960 SLC51AQ86UW1 340 aa14.19□□□□□ -0.14
HDAC7-230ENST00000552960 PHKBQ93100 1093 aa14.19□□□□□ -0.14
HDAC7-230ENST00000552960 YEATS4O95619 227 aa14.19□□□□□ -0.14
HDAC7-230ENST00000552960 TRIM65Q6PJ69 517 aa14.19□□□□□ -0.14
HDAC7-230ENST00000552960 WDR24Q96S15 920 aa14.19□□□□□ -0.14
HDAC7-230ENST00000552960 POLR3EQ9NVU0 708 aa14.19□□□□□ -0.14
HDAC7-230ENST00000552960 ZSCAN12O43309 604 aa14.18□□□□□ -0.14
HDAC7-230ENST00000552960 CBFA2T2O43439 604 aa14.18□□□□□ -0.14
HDAC7-230ENST00000552960 CAPN2P17655 700 aa14.18□□□□□ -0.14
HDAC7-230ENST00000552960 KRBA2Q6ZNG9 492 aa14.18□□□□□ -0.14
HDAC7-230ENST00000552960 CNNM3Q8NE01 707 aa14.18□□□□□ -0.14
HDAC7-230ENST00000552960 CPLX3Q8WVH0 158 aa14.18□□□□□ -0.14
HDAC7-230ENST00000552960 PPP2R2CQ9Y2T4 447 aa14.18□□□□□ -0.14
HDAC7-230ENST00000552960 TADA3O75528 432 aa14.18□□□□□ -0.14
HDAC7-230ENST00000552960 FGAP02671 866 aa14.18□□□□□ -0.14
HDAC7-230ENST00000552960 ZNF827Q17R98 1081 aa14.18□□□□□ -0.14
HDAC7-230ENST00000552960 LRRFIP1Q32MZ4 808 aaKnown RBP14.18□□□□□ -0.14
HDAC7-230ENST00000552960 MICU3Q86XE3 530 aa14.18□□□□□ -0.14
HDAC7-230ENST00000552960 TRMT44Q8IYL2 757 aaKnown RBP14.18□□□□□ -0.14
HDAC7-230ENST00000552960 CCDC82Q8N4S0 544 aa14.18□□□□□ -0.14
HDAC7-230ENST00000552960 ALG1Q9BT22 464 aa14.18□□□□□ -0.14
HDAC7-230ENST00000552960 CEP126Q9P2H0 1117 aa14.18□□□□□ -0.14
HDAC7-230ENST00000552960 DENND2AQ9ULE3 1009 aa14.18□□□□□ -0.14
HDAC7-230ENST00000552960 ERVV-1B6SEH8 477 aa14.17□□□□□ -0.14
HDAC7-230ENST00000552960 CMA1P23946 247 aa14.17□□□□□ -0.14
HDAC7-230ENST00000552960 AXDND1Q5T1B0 1012 aaPredicted RBP14.17□□□□□ -0.14
HDAC7-230ENST00000552960 SMARCE1Q969G3 411 aa14.17□□□□□ -0.14
HDAC7-230ENST00000552960 XAGE2Q96GT9 111 aa14.17□□□□□ -0.14
HDAC7-230ENST00000552960 FOXN1O15353 648 aa14.17□□□□□ -0.14
HDAC7-230ENST00000552960 SASH3O75995 380 aa14.17□□□□□ -0.14
HDAC7-230ENST00000552960 KIF23Q02241 960 aaPredicted RBP14.17□□□□□ -0.14
HDAC7-230ENST00000552960 SMC1AQ14683 1233 aaKnown RBP14.17□□□□□ -0.14
HDAC7-230ENST00000552960 REXO1L1PQ8IX06 675 aa14.17□□□□□ -0.14
HDAC7-230ENST00000552960 SEPT12Q8IYM1 358 aa14.17□□□□□ -0.14
HDAC7-230ENST00000552960 CCDC12Q8WUD4 166 aaPredicted RBP14.17□□□□□ -0.14
HDAC7-230ENST00000552960 IRX2Q9BZI1 471 aaPredicted RBP14.17□□□□□ -0.14
HDAC7-230ENST00000552960 ZKSCAN7Q9P0L1 754 aaPredicted RBP14.17□□□□□ -0.14
HDAC7-230ENST00000552960 PARP3Q9Y6F1 533 aa14.17□□□□□ -0.14
HDAC7-230ENST00000552960 NUP98P52948 1817 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms