RNA–Protein interactions for RNA: ENST00000551516.1

CPSF6-207, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2 BASIC

Gene CPSF6, Length 234 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-207ENST00000551516 FGFR3P22607 806 aa3.47□□□□□ -1.85
CPSF6-207ENST00000551516 GSTT1P30711 240 aa3.47□□□□□ -1.85
CPSF6-207ENST00000551516 SOX18P35713 384 aa3.47□□□□□ -1.85
CPSF6-207ENST00000551516 HDLBPQ00341 1268 aaKnown RBP3.47□□□□□ -1.85
CPSF6-207ENST00000551516 HYAL2Q12891 473 aa3.47□□□□□ -1.85
CPSF6-207ENST00000551516 TAF1CQ15572 869 aaPredicted RBP3.47□□□□□ -1.85
CPSF6-207ENST00000551516 PCSK7Q16549 785 aa3.47□□□□□ -1.85
CPSF6-207ENST00000551516 NBPF8Q3BBV2 869 aa3.47□□□□□ -1.85
CPSF6-207ENST00000551516 RGL3Q3MIN7 710 aa3.47□□□□□ -1.85
CPSF6-207ENST00000551516 KIAA0319Q5VV43 1072 aa3.47□□□□□ -1.85
CPSF6-207ENST00000551516 C9orf131Q5VYM1 1079 aa3.47□□□□□ -1.85
CPSF6-207ENST00000551516 Q6ZNB5 142 aa3.47□□□□□ -1.85
CPSF6-207ENST00000551516 SV2AQ7L0J3 742 aa3.47□□□□□ -1.85
CPSF6-207ENST00000551516 MARCH10Q8NA82 808 aaPredicted RBP3.47□□□□□ -1.85
CPSF6-207ENST00000551516 RBSNQ9H1K0 784 aa3.47□□□□□ -1.85
CPSF6-207ENST00000551516 ZFYVE1Q9HBF4 777 aa3.47□□□□□ -1.85
CPSF6-207ENST00000551516 STRN4Q9NRL3 753 aa3.47□□□□□ -1.85
CPSF6-207ENST00000551516 NDFIP2Q9NV92 336 aa3.47□□□□□ -1.85
CPSF6-207ENST00000551516 TLR7Q9NYK1 1049 aaKnown RBP3.47□□□□□ -1.85
CPSF6-207ENST00000551516 ZFATQ9P243 1243 aa3.47□□□□□ -1.85
CPSF6-207ENST00000551516 USP35Q9P2H5 1018 aa3.47□□□□□ -1.85
CPSF6-207ENST00000551516 KANSL3Q9P2N6 904 aa3.47□□□□□ -1.85
CPSF6-207ENST00000551516 SALL4Q9UJQ4 1053 aa3.47□□□□□ -1.85
CPSF6-207ENST00000551516 PRR12Q9ULL5 1215 aa3.47□□□□□ -1.85
CPSF6-207ENST00000551516 TULP4Q9NRJ4 1543 aa3.47□□□□□ -1.85
CPSF6-207ENST00000551516 USP31Q70CQ4 1352 aa3.47□□□□□ -1.85
CPSF6-207ENST00000551516 PHRF1Q9P1Y6 1649 aaKnown RBP3.47□□□□□ -1.85
CPSF6-207ENST00000551516 A0A1W2PP55 124 aa3.46□□□□□ -1.86
CPSF6-207ENST00000551516 PPFIA3O75145 1194 aa3.46□□□□□ -1.86
CPSF6-207ENST00000551516 TRIM37O94972 964 aa3.46□□□□□ -1.86
CPSF6-207ENST00000551516 KIF4AO95239 1232 aa3.46□□□□□ -1.86
CPSF6-207ENST00000551516 MAP3K6O95382 1288 aa3.46□□□□□ -1.86
CPSF6-207ENST00000551516 CTSHP09668 335 aa3.46□□□□□ -1.86
CPSF6-207ENST00000551516 VEGFBP49765 207 aa3.46□□□□□ -1.86
CPSF6-207ENST00000551516 FANCCQ00597 558 aa3.46□□□□□ -1.86
CPSF6-207ENST00000551516 GRM2Q14416 872 aa3.46□□□□□ -1.86
CPSF6-207ENST00000551516 CHRNA2Q15822 529 aa3.46□□□□□ -1.86
CPSF6-207ENST00000551516 LDLRAD1Q5T700 205 aa3.46□□□□□ -1.86
CPSF6-207ENST00000551516 FAM196AQ6ZSG2 479 aa3.46□□□□□ -1.86
CPSF6-207ENST00000551516 DHX32Q7L7V1 743 aaKnown RBP3.46□□□□□ -1.86
CPSF6-207ENST00000551516 HS2ST1Q7LGA3 356 aa3.46□□□□□ -1.86
CPSF6-207ENST00000551516 RAB44Q7Z6P3 723 aaPredicted RBP3.46□□□□□ -1.86
CPSF6-207ENST00000551516 ARHGEF25Q86VW2 580 aa3.46□□□□□ -1.86
CPSF6-207ENST00000551516 NT5DC4Q86YG4 428 aa3.46□□□□□ -1.86
CPSF6-207ENST00000551516 VWA5B2Q8N398 1253 aa3.46□□□□□ -1.86
CPSF6-207ENST00000551516 SLC30A3Q99726 388 aa3.46□□□□□ -1.86
CPSF6-207ENST00000551516 IGFLR1Q9H665 355 aa3.46□□□□□ -1.86
CPSF6-207ENST00000551516 CUEDC1Q9NWM3 386 aaPredicted RBP3.46□□□□□ -1.86
CPSF6-207ENST00000551516 MAP3K5Q99683 1374 aa3.46□□□□□ -1.86
CPSF6-207ENST00000551516 COL5A2P05997 1499 aaPredicted RBP3.46□□□□□ -1.86
CPSF6-207ENST00000551516 PLCH1Q4KWH8 1693 aa3.46□□□□□ -1.86
CPSF6-207ENST00000551516 COL18A1P39060 1754 aa3.46□□□□□ -1.86
CPSF6-207ENST00000551516 ACEP12821 1306 aa3.45□□□□□ -1.86
CPSF6-207ENST00000551516 CPSF1Q10570 1443 aaKnown RBP3.45□□□□□ -1.86
CPSF6-207ENST00000551516 SLIT3O75094 1523 aa3.45□□□□□ -1.86
CPSF6-207ENST00000551516 LOC102724428A0A0B4J2F2 783 aa3.45□□□□□ -1.86
CPSF6-207ENST00000551516 GHRHP01286 108 aa3.45□□□□□ -1.86
CPSF6-207ENST00000551516 GCP02774 474 aa3.45□□□□□ -1.86
CPSF6-207ENST00000551516 BMP4P12644 408 aa3.45□□□□□ -1.86
CPSF6-207ENST00000551516 XRCC5P13010 732 aaKnown RBP3.45□□□□□ -1.86
CPSF6-207ENST00000551516 SNRPBP14678 240 aaKnown RBP3.45□□□□□ -1.86
CPSF6-207ENST00000551516 BAG6P46379 1132 aa3.45□□□□□ -1.86
CPSF6-207ENST00000551516 ST13P50502 369 aaKnown RBP3.45□□□□□ -1.86
CPSF6-207ENST00000551516 NRLP54845 237 aa3.45□□□□□ -1.86
CPSF6-207ENST00000551516 FCGRTP55899 365 aa3.45□□□□□ -1.86
CPSF6-207ENST00000551516 SIK1P57059 783 aa3.45□□□□□ -1.86
CPSF6-207ENST00000551516 CTBSQ01459 385 aa3.45□□□□□ -1.86
CPSF6-207ENST00000551516 GRIN2CQ14957 1233 aa3.45□□□□□ -1.86
CPSF6-207ENST00000551516 NAALADL2Q58DX5 795 aa3.45□□□□□ -1.86
CPSF6-207ENST00000551516 DTHD1Q6ZMT9 781 aa3.45□□□□□ -1.86
CPSF6-207ENST00000551516 TCP11L2Q8N4U5 519 aa3.45□□□□□ -1.86
CPSF6-207ENST00000551516 OSMRQ99650 979 aa3.45□□□□□ -1.86
CPSF6-207ENST00000551516 HIRIP3Q9BW71 556 aaPredicted RBP3.45□□□□□ -1.86
CPSF6-207ENST00000551516 UBE2OQ9C0C9 1292 aaKnown RBP3.45□□□□□ -1.86
CPSF6-207ENST00000551516 TGIF2Q9GZN2 237 aa3.45□□□□□ -1.86
CPSF6-207ENST00000551516 CCSER2Q9H7U1 834 aa3.45□□□□□ -1.86
CPSF6-207ENST00000551516 LIN7BQ9HAP6 207 aa3.45□□□□□ -1.86
CPSF6-207ENST00000551516 LRRC4BQ9NT99 713 aa3.45□□□□□ -1.86
CPSF6-207ENST00000551516 TTF2Q9UNY4 1162 aaKnown RBP3.45□□□□□ -1.86
CPSF6-207ENST00000551516 AKAP2Q9Y2D5 859 aa3.45□□□□□ -1.86
CPSF6-207ENST00000551516 THRAP3Q9Y2W1 955 aaKnown RBP3.45□□□□□ -1.86
CPSF6-207ENST00000551516 CD163L1Q9NR16 1453 aa3.45□□□□□ -1.86
CPSF6-207ENST00000551516 RREB1Q92766 1687 aa3.45□□□□□ -1.86
CPSF6-207ENST00000551516 COL14A1Q05707 1796 aaKnown RBP3.44□□□□□ -1.86
CPSF6-207ENST00000551516 CASZ1Q86V15 1759 aa3.44□□□□□ -1.86
CPSF6-207ENST00000551516 NRKQ7Z2Y5 1582 aa3.44□□□□□ -1.86
CPSF6-207ENST00000551516 NSD2O96028 1365 aa3.44□□□□□ -1.86
CPSF6-207ENST00000551516 NINLQ9Y2I6 1382 aa3.44□□□□□ -1.86
CPSF6-207ENST00000551516 TMEM238LA0A1B0GVL6 79 aa3.44□□□□□ -1.86
CPSF6-207ENST00000551516 GPR25O00155 361 aa3.44□□□□□ -1.86
CPSF6-207ENST00000551516 KCNQ2O43526 872 aa3.44□□□□□ -1.86
CPSF6-207ENST00000551516 APBA3O96018 575 aa3.44□□□□□ -1.86
CPSF6-207ENST00000551516 HOXD8P13378 290 aaPredicted RBP3.44□□□□□ -1.86
CPSF6-207ENST00000551516 MX2P20592 715 aa3.44□□□□□ -1.86
CPSF6-207ENST00000551516 GPLD1P80108 840 aa3.44□□□□□ -1.86
CPSF6-207ENST00000551516 TBC1D8BQ0IIM8 1120 aa3.44□□□□□ -1.86
CPSF6-207ENST00000551516 GNL2Q13823 731 aaKnown RBP3.44□□□□□ -1.86
CPSF6-207ENST00000551516 SAFB2Q14151 953 aaKnown RBP eCLIP3.44□□□□□ -1.86
CPSF6-207ENST00000551516 SF3A1Q15459 793 aaKnown RBP3.44□□□□□ -1.86
CPSF6-207ENST00000551516 MEI1Q5TIA1 1274 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 83.6 ms