RNA–Protein interactions for RNA: ENST00000549970.5

VPS29-207, Transcript of VPS29, retromer complex component, humanhuman

TSL 3 BASIC

Gene VPS29, Length 818 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-207ENST00000549970 CEP85Q6P2H3 762 aa20.07■□□□□ 0.8
VPS29-207ENST00000549970 CD99L2Q8TCZ2 262 aa20.07■□□□□ 0.8
VPS29-207ENST00000549970 SNRKQ9NRH2 765 aa20.07■□□□□ 0.8
VPS29-207ENST00000549970 LRP2BPQ9P2M1 347 aa20.07■□□□□ 0.8
VPS29-207ENST00000549970 NOP58Q9Y2X3 529 aaKnown RBP20.07■□□□□ 0.8
VPS29-207ENST00000549970 LDHCP07864 332 aa20.06■□□□□ 0.8
VPS29-207ENST00000549970 PPATQ06203 517 aa20.06■□□□□ 0.8
VPS29-207ENST00000549970 SH3BP5LQ7L8J4 393 aa20.06■□□□□ 0.8
VPS29-207ENST00000549970 ERO1AQ96HE7 468 aa20.06■□□□□ 0.8
VPS29-207ENST00000549970 ZFYVE28Q9HCC9 887 aa20.06■□□□□ 0.8
VPS29-207ENST00000549970 HTTP42858 3142 aa20.06■□□□□ 0.8
VPS29-207ENST00000549970 ATRNL1Q5VV63 1379 aa20.06■□□□□ 0.8
VPS29-207ENST00000549970 DDTLA6NHG4 134 aaPredicted RBP20.05■□□□□ 0.8
VPS29-207ENST00000549970 BTBD19C9JJ37 291 aa20.05■□□□□ 0.8
VPS29-207ENST00000549970 RHBDL3P58872 404 aa20.05■□□□□ 0.8
VPS29-207ENST00000549970 SP3Q02447 781 aa20.05■□□□□ 0.8
VPS29-207ENST00000549970 OTOP1Q7RTM1 612 aa20.05■□□□□ 0.8
VPS29-207ENST00000549970 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.05■□□□□ 0.8
VPS29-207ENST00000549970 SLURP2P0DP57 97 aa20.04■□□□□ 0.8
VPS29-207ENST00000549970 MS4A1P11836 297 aa20.04■□□□□ 0.8
VPS29-207ENST00000549970 NOL9Q5SY16 702 aaKnown RBP20.04■□□□□ 0.8
VPS29-207ENST00000549970 CCDC8Q9H0W5 538 aaPredicted RBP20.04■□□□□ 0.8
VPS29-207ENST00000549970 TLR7Q9NYK1 1049 aaKnown RBP20.04■□□□□ 0.8
VPS29-207ENST00000549970 DBNLQ9UJU6 430 aaKnown RBP20.04■□□□□ 0.8
VPS29-207ENST00000549970 CENPFP49454 3210 aa20.04■□□□□ 0.8
VPS29-207ENST00000549970 EXOC6BQ9Y2D4 811 aa20.03■□□□□ 0.8
VPS29-207ENST00000549970 PHF20L1A8MW92 1017 aa20.02■□□□□ 0.8
VPS29-207ENST00000549970 NAA16Q6N069 864 aaPredicted RBP20.02■□□□□ 0.8
VPS29-207ENST00000549970 EAF2Q96CJ1 260 aaPredicted RBP20.02■□□□□ 0.8
VPS29-207ENST00000549970 EFCC1Q9HA90 598 aa20.02■□□□□ 0.8
VPS29-207ENST00000549970 MAST2Q6P0Q8 1798 aa20.01■□□□□ 0.79
VPS29-207ENST00000549970 CYP2E1P05181 493 aaPredicted RBP20.01■□□□□ 0.79
VPS29-207ENST00000549970 ZAP70P43403 619 aa20.01■□□□□ 0.79
VPS29-207ENST00000549970 CAP1Q01518 475 aa20.01■□□□□ 0.79
VPS29-207ENST00000549970 SCYL3Q8IZE3 742 aa20.01■□□□□ 0.79
VPS29-207ENST00000549970 ZNF512BQ96KM6 892 aaPredicted RBP20.01■□□□□ 0.79
VPS29-207ENST00000549970 NOL10Q9BSC4 688 aaKnown RBP20.01■□□□□ 0.79
VPS29-207ENST00000549970 ZCCHC17Q9NP64 241 aaKnown RBP20.01■□□□□ 0.79
VPS29-207ENST00000549970 RCAN3Q9UKA8 241 aa20.01■□□□□ 0.79
VPS29-207ENST00000549970 KCNH4Q9UQ05 1017 aa20.01■□□□□ 0.79
VPS29-207ENST00000549970 COG6Q9Y2V7 657 aa20.01■□□□□ 0.79
VPS29-207ENST00000549970 MYO5AQ9Y4I1 1855 aaKnown RBP20.01■□□□□ 0.79
VPS29-207ENST00000549970 NPM3O75607 178 aaKnown RBP20■□□□□ 0.79
VPS29-207ENST00000549970 MAP4K4O95819 1239 aaPredicted RBP20■□□□□ 0.79
VPS29-207ENST00000549970 TEX11Q8IYF3 940 aa20■□□□□ 0.79
VPS29-207ENST00000549970 PICK1Q9NRD5 415 aa20■□□□□ 0.79
VPS29-207ENST00000549970 AATFQ9NY61 560 aaKnown RBP eCLIP20■□□□□ 0.79
VPS29-207ENST00000549970 FAM196BA6NMK8 535 aa19.99■□□□□ 0.79
VPS29-207ENST00000549970 TLR2O60603 784 aa19.99■□□□□ 0.79
VPS29-207ENST00000549970 MAP3K10Q02779 954 aa19.99■□□□□ 0.79
VPS29-207ENST00000549970 ERC1Q8IUD2 1116 aa19.99■□□□□ 0.79
VPS29-207ENST00000549970 SH3RF3Q8TEJ3 882 aaPredicted RBP19.99■□□□□ 0.79
VPS29-207ENST00000549970 OSBPL5Q9H0X9 879 aaPredicted RBP19.99■□□□□ 0.79
VPS29-207ENST00000549970 PIH1D3Q9NQM4 214 aaKnown RBP19.99■□□□□ 0.79
VPS29-207ENST00000549970 DDX19BQ9UMR2 479 aa19.99■□□□□ 0.79
VPS29-207ENST00000549970 PTPN22Q9Y2R2 807 aa19.99■□□□□ 0.79
VPS29-207ENST00000549970 ZHX2Q9Y6X8 837 aa19.99■□□□□ 0.79
VPS29-207ENST00000549970 PDHXO00330 501 aa19.98■□□□□ 0.79
VPS29-207ENST00000549970 BAG3O95817 575 aa19.98■□□□□ 0.79
VPS29-207ENST00000549970 PTPRAP18433 802 aa19.98■□□□□ 0.79
VPS29-207ENST00000549970 ANKRD23Q86SG2 305 aa19.98■□□□□ 0.79
VPS29-207ENST00000549970 AACSQ86V21 672 aa19.98■□□□□ 0.79
VPS29-207ENST00000549970 DOCK1Q14185 1865 aa19.98■□□□□ 0.79
VPS29-207ENST00000549970 CXCL11O14625 94 aa19.97■□□□□ 0.79
VPS29-207ENST00000549970 MOGSQ13724 837 aa19.97■□□□□ 0.79
VPS29-207ENST00000549970 ADGRA1Q86SQ6 560 aa19.97■□□□□ 0.79
VPS29-207ENST00000549970 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.97■□□□□ 0.79
VPS29-207ENST00000549970 IL1RAPL2Q9NP60 686 aa19.97■□□□□ 0.79
VPS29-207ENST00000549970 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.97■□□□□ 0.79
VPS29-207ENST00000549970 NDUFB9Q9Y6M9 179 aa19.97■□□□□ 0.79
VPS29-207ENST00000549970 TNRC18O15417 2968 aaPredicted RBP19.96■□□□□ 0.79
VPS29-207ENST00000549970 APBB1O00213 710 aa19.96■□□□□ 0.79
VPS29-207ENST00000549970 TBC1D12O60347 775 aa19.96■□□□□ 0.79
VPS29-207ENST00000549970 CTNND1O60716 968 aaKnown RBP19.96■□□□□ 0.79
VPS29-207ENST00000549970 ARHGEF6Q15052 776 aa19.96■□□□□ 0.79
VPS29-207ENST00000549970 HSP90AB4PQ58FF6 505 aa19.96■□□□□ 0.79
VPS29-207ENST00000549970 ZBTB40Q9NUA8 1239 aa19.96■□□□□ 0.79
VPS29-207ENST00000549970 CPA4Q9UI42 421 aa19.96■□□□□ 0.79
VPS29-207ENST00000549970 COL2A1P02458 1487 aaPredicted RBP19.96■□□□□ 0.79
VPS29-207ENST00000549970 ZSWIM8A7E2V4 1837 aa19.95■□□□□ 0.78
VPS29-207ENST00000549970 HMMRO75330 724 aa19.95■□□□□ 0.78
VPS29-207ENST00000549970 IDH1O75874 414 aaKnown RBP19.95■□□□□ 0.78
VPS29-207ENST00000549970 ECM2O94769 699 aaPredicted RBP19.95■□□□□ 0.78
VPS29-207ENST00000549970 PLCG2P16885 1265 aa19.95■□□□□ 0.78
VPS29-207ENST00000549970 CCDC84Q86UT8 332 aaPredicted RBP19.95■□□□□ 0.78
VPS29-207ENST00000549970 RPAP2Q8IXW5 612 aaPredicted RBP19.95■□□□□ 0.78
VPS29-207ENST00000549970 RHPN1Q8TCX5 695 aa19.95■□□□□ 0.78
VPS29-207ENST00000549970 ARHGAP39Q9C0H5 1083 aa19.95■□□□□ 0.78
VPS29-207ENST00000549970 AFG3L2Q9Y4W6 797 aa19.95■□□□□ 0.78
VPS29-207ENST00000549970 BRCA2P51587 3418 aa19.94■□□□□ 0.78
VPS29-207ENST00000549970 A0A0G2JLL6 359 aaPredicted RBP19.94■□□□□ 0.78
VPS29-207ENST00000549970 CYP7A1P22680 504 aa19.94■□□□□ 0.78
VPS29-207ENST00000549970 PPP4CP60510 307 aa19.94■□□□□ 0.78
VPS29-207ENST00000549970 LACTBP83111 547 aaPredicted RBP19.94■□□□□ 0.78
VPS29-207ENST00000549970 KIF22Q14807 665 aa19.94■□□□□ 0.78
VPS29-207ENST00000549970 GPAT2Q6NUI2 795 aa19.94■□□□□ 0.78
VPS29-207ENST00000549970 GADL1Q6ZQY3 521 aa19.94■□□□□ 0.78
VPS29-207ENST00000549970 PRRT2Q7Z6L0 340 aaPredicted RBP19.94■□□□□ 0.78
VPS29-207ENST00000549970 MAPKAPK5Q8IW41 473 aa19.94■□□□□ 0.78
VPS29-207ENST00000549970 TGFBRAP1Q8WUH2 860 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms