RNA–Protein interactions for RNA: ENST00000548356.1

C12orf49-204, Transcript of chromosome 12 open reading frame 49, humanhuman

TSL 2 BASIC

Gene C12orf49, Length 923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf49-204ENST00000548356 PTPRAP18433 802 aa18.31■□□□□ 0.52
C12orf49-204ENST00000548356 ZEB1P37275 1124 aaPredicted RBP18.31■□□□□ 0.52
C12orf49-204ENST00000548356 DIXDC1Q155Q3 683 aa18.31■□□□□ 0.52
C12orf49-204ENST00000548356 NECAB2Q7Z6G3 386 aa18.31■□□□□ 0.52
C12orf49-204ENST00000548356 PAWRQ96IZ0 340 aaKnown RBP18.31■□□□□ 0.52
C12orf49-204ENST00000548356 GDF15Q99988 308 aa18.31■□□□□ 0.52
C12orf49-204ENST00000548356 USP40Q9NVE5 1235 aa18.31■□□□□ 0.52
C12orf49-204ENST00000548356 AFG3L2Q9Y4W6 797 aa18.31■□□□□ 0.52
C12orf49-204ENST00000548356 AK9Q5TCS8 1911 aa18.3■□□□□ 0.52
C12orf49-204ENST00000548356 GADL1Q6ZQY3 521 aa18.3■□□□□ 0.52
C12orf49-204ENST00000548356 ANKLE1Q8NAG6 615 aa18.3■□□□□ 0.52
C12orf49-204ENST00000548356 KLHDC4Q8TBB5 520 aa18.3■□□□□ 0.52
C12orf49-204ENST00000548356 SMCR8Q8TEV9 937 aaPredicted RBP18.3■□□□□ 0.52
C12orf49-204ENST00000548356 LPIN2Q92539 896 aa18.3■□□□□ 0.52
C12orf49-204ENST00000548356 SLC5A1P13866 664 aa18.29■□□□□ 0.52
C12orf49-204ENST00000548356 PRDX5P30044 214 aa18.29■□□□□ 0.52
C12orf49-204ENST00000548356 ZFPM1Q8IX07 1006 aa18.29■□□□□ 0.52
C12orf49-204ENST00000548356 COA7Q96BR5 231 aa18.29■□□□□ 0.52
C12orf49-204ENST00000548356 ENTPD3O75355 529 aa18.28■□□□□ 0.52
C12orf49-204ENST00000548356 LDHBP07195 334 aaKnown RBP18.28■□□□□ 0.52
C12orf49-204ENST00000548356 MAP3K10Q02779 954 aa18.28■□□□□ 0.52
C12orf49-204ENST00000548356 IDI2Q9BXS1 227 aa18.28■□□□□ 0.52
C12orf49-204ENST00000548356 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.28■□□□□ 0.52
C12orf49-204ENST00000548356 SPINK5Q9NQ38 1064 aaPredicted RBP18.28■□□□□ 0.52
C12orf49-204ENST00000548356 ALPK3Q96L96 1907 aa18.27■□□□□ 0.52
C12orf49-204ENST00000548356 MYH13Q9UKX3 1938 aa18.27■□□□□ 0.52
C12orf49-204ENST00000548356 SALL1Q9NSC2 1324 aa18.27■□□□□ 0.52
C12orf49-204ENST00000548356 LRIT3Q3SXY7 679 aa18.27■□□□□ 0.52
C12orf49-204ENST00000548356 DEFB123Q8N688 67 aa18.27■□□□□ 0.52
C12orf49-204ENST00000548356 DIS3LQ8TF46 1054 aaKnown RBP18.27■□□□□ 0.52
C12orf49-204ENST00000548356 AGTPBP1Q9UPW5 1226 aa18.27■□□□□ 0.52
C12orf49-204ENST00000548356 SALL2Q9Y467 1007 aaPredicted RBP18.27■□□□□ 0.52
C12orf49-204ENST00000548356 DOCK2Q92608 1830 aa18.26■□□□□ 0.51
C12orf49-204ENST00000548356 EYA2O00167 538 aa18.26■□□□□ 0.51
C12orf49-204ENST00000548356 CTNND1O60716 968 aaKnown RBP18.26■□□□□ 0.51
C12orf49-204ENST00000548356 RGS3P49796 1198 aa18.26■□□□□ 0.51
C12orf49-204ENST00000548356 FAM110CQ1W6H9 321 aa18.26■□□□□ 0.51
C12orf49-204ENST00000548356 C7orf61Q8IZ16 206 aa18.26■□□□□ 0.51
C12orf49-204ENST00000548356 ANKRD13CQ8N6S4 541 aa18.26■□□□□ 0.51
C12orf49-204ENST00000548356 TAOK2Q9UL54 1235 aa18.26■□□□□ 0.51
C12orf49-204ENST00000548356 STXBP5LQ9Y2K9 1186 aa18.26■□□□□ 0.51
C12orf49-204ENST00000548356 LRRFIP2Q9Y608 721 aaKnown RBP18.26■□□□□ 0.51
C12orf49-204ENST00000548356 GNL3LQ9NVN8 582 aaKnown RBP18.25■□□□□ 0.51
C12orf49-204ENST00000548356 PNMA3Q9UL41 463 aa18.25■□□□□ 0.51
C12orf49-204ENST00000548356 RFX7Q2KHR2 1363 aa18.25■□□□□ 0.51
C12orf49-204ENST00000548356 PTPRFP10586 1907 aa18.25■□□□□ 0.51
C12orf49-204ENST00000548356 TRIM75PA6NK02 468 aa18.24■□□□□ 0.51
C12orf49-204ENST00000548356 SEMA3EO15041 775 aa18.24■□□□□ 0.51
C12orf49-204ENST00000548356 ZBTB22O15209 634 aa18.24■□□□□ 0.51
C12orf49-204ENST00000548356 HMGCRP04035 888 aa18.24■□□□□ 0.51
C12orf49-204ENST00000548356 RFX5P48382 616 aaPredicted RBP18.24■□□□□ 0.51
C12orf49-204ENST00000548356 SH3BP5LQ7L8J4 393 aa18.24■□□□□ 0.51
C12orf49-204ENST00000548356 NBPF3Q9H094 633 aa18.24■□□□□ 0.51
C12orf49-204ENST00000548356 ZMYND8Q9ULU4 1186 aaPredicted RBP18.24■□□□□ 0.51
C12orf49-204ENST00000548356 GAKO14976 1311 aa18.23■□□□□ 0.51
C12orf49-204ENST00000548356 ZSCAN29Q8IWY8 852 aaPredicted RBP18.23■□□□□ 0.51
C12orf49-204ENST00000548356 TDHQ8IZJ6 230 aa18.23■□□□□ 0.51
C12orf49-204ENST00000548356 PROCA1Q8NCQ7 364 aaPredicted RBP18.23■□□□□ 0.51
C12orf49-204ENST00000548356 DENND2AQ9ULE3 1009 aa18.23■□□□□ 0.51
C12orf49-204ENST00000548356 RPTORQ8N122 1335 aa18.23■□□□□ 0.51
C12orf49-204ENST00000548356 DOCK1Q14185 1865 aa18.22■□□□□ 0.51
C12orf49-204ENST00000548356 PHIPQ8WWQ0 1821 aa18.22■□□□□ 0.51
C12orf49-204ENST00000548356 DDTLA6NHG4 134 aaPredicted RBP18.22■□□□□ 0.51
C12orf49-204ENST00000548356 GCLCP48506 637 aaPredicted RBP18.22■□□□□ 0.51
C12orf49-204ENST00000548356 TREML2Q5T2D2 321 aa18.22■□□□□ 0.51
C12orf49-204ENST00000548356 Q7L0L9 218 aa18.22■□□□□ 0.51
C12orf49-204ENST00000548356 ATG9AQ7Z3C6 839 aa18.22■□□□□ 0.51
C12orf49-204ENST00000548356 ZGPATQ8N5A5 531 aaKnown RBP18.22■□□□□ 0.51
C12orf49-204ENST00000548356 USP44Q9H0E7 712 aa18.22■□□□□ 0.51
C12orf49-204ENST00000548356 C11orf49Q9H6J7 331 aa18.22■□□□□ 0.51
C12orf49-204ENST00000548356 HMX1Q9NP08 348 aaPredicted RBP18.22■□□□□ 0.51
C12orf49-204ENST00000548356 MTMR10Q9NXD2 777 aa18.22■□□□□ 0.51
C12orf49-204ENST00000548356 FBXO3Q9UK99 471 aa18.22■□□□□ 0.51
C12orf49-204ENST00000548356 DOCK3Q8IZD9 2030 aa18.22■□□□□ 0.51
C12orf49-204ENST00000548356 MAGEA10P43363 369 aaPredicted RBP18.21■□□□□ 0.51
C12orf49-204ENST00000548356 ATP2B3Q16720 1220 aa18.21■□□□□ 0.51
C12orf49-204ENST00000548356 GJD2Q9UKL4 321 aa18.21■□□□□ 0.51
C12orf49-204ENST00000548356 UNC80Q8N2C7 3258 aa18.21■□□□□ 0.51
C12orf49-204ENST00000548356 PTPRCP08575 1304 aa18.21■□□□□ 0.51
C12orf49-204ENST00000548356 TBC1D12O60347 775 aa18.2■□□□□ 0.5
C12orf49-204ENST00000548356 SLF2Q8IX21 1173 aa18.2■□□□□ 0.5
C12orf49-204ENST00000548356 MRPL50Q8N5N7 158 aaKnown RBP18.2■□□□□ 0.5
C12orf49-204ENST00000548356 FAM163AQ96GL9 167 aaPredicted RBP18.2■□□□□ 0.5
C12orf49-204ENST00000548356 DDX4Q9NQI0 724 aaKnown RBP18.2■□□□□ 0.5
C12orf49-204ENST00000548356 OGDHLQ9ULD0 1010 aa18.2■□□□□ 0.5
C12orf49-204ENST00000548356 CIAO1O76071 339 aa18.19■□□□□ 0.5
C12orf49-204ENST00000548356 SLURP2P0DP57 97 aa18.19■□□□□ 0.5
C12orf49-204ENST00000548356 SYN1P17600 705 aa18.19■□□□□ 0.5
C12orf49-204ENST00000548356 PABPC4Q13310 644 aaKnown RBP eCLIP18.19■□□□□ 0.5
C12orf49-204ENST00000548356 TBC1D2Q9BYX2 928 aa18.19■□□□□ 0.5
C12orf49-204ENST00000548356 MRS2Q9HD23 443 aa18.19■□□□□ 0.5
C12orf49-204ENST00000548356 CEP126Q9P2H0 1117 aa18.19■□□□□ 0.5
C12orf49-204ENST00000548356 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.19■□□□□ 0.5
C12orf49-204ENST00000548356 MYH2Q9UKX2 1941 aa18.18■□□□□ 0.5
C12orf49-204ENST00000548356 PHKA1P46020 1223 aa18.18■□□□□ 0.5
C12orf49-204ENST00000548356 TRIM32Q13049 653 aa18.18■□□□□ 0.5
C12orf49-204ENST00000548356 CCDC84Q86UT8 332 aaPredicted RBP18.18■□□□□ 0.5
C12orf49-204ENST00000548356 DZIP1Q86YF9 867 aaKnown RBP18.18■□□□□ 0.5
C12orf49-204ENST00000548356 UBE2OQ9C0C9 1292 aaKnown RBP18.18■□□□□ 0.5
C12orf49-204ENST00000548356 OSBPL5Q9H0X9 879 aaPredicted RBP18.18■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms