RNA–Protein interactions for RNA: ENST00000548278.1

RITA1-201, Transcript of RBPJ interacting and tubulin associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RITA1, Length 2,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RITA1-201ENST00000548278 CRNKL1Q9BZJ0 848 aaKnown RBP24.47■■□□□ 1.51
RITA1-201ENST00000548278 RBSNQ9H1K0 784 aa24.47■■□□□ 1.51
RITA1-201ENST00000548278 FAM217BQ9NTX9 383 aaPredicted RBP24.47■■□□□ 1.51
RITA1-201ENST00000548278 CTR9Q6PD62 1173 aa24.47■■□□□ 1.51
RITA1-201ENST00000548278 SLC12A7Q9Y666 1083 aa24.47■■□□□ 1.51
RITA1-201ENST00000548278 LRRC37AA6NMS7 1700 aa24.47■■□□□ 1.51
RITA1-201ENST00000548278 CYP2D7A0A087X1C5 515 aa24.46■■□□□ 1.51
RITA1-201ENST00000548278 SART3Q15020 963 aaKnown RBP24.46■■□□□ 1.51
RITA1-201ENST00000548278 C8orf76Q96K31 380 aa24.46■■□□□ 1.51
RITA1-201ENST00000548278 NID2Q14112 1375 aa24.46■■□□□ 1.51
RITA1-201ENST00000548278 CCDC69A6NI79 296 aa24.46■■□□□ 1.51
RITA1-201ENST00000548278 CDKL5O76039 1030 aa24.46■■□□□ 1.51
RITA1-201ENST00000548278 LDHBP07195 334 aaKnown RBP24.46■■□□□ 1.51
RITA1-201ENST00000548278 FGRP09769 529 aa24.46■■□□□ 1.51
RITA1-201ENST00000548278 NTRK3Q16288 839 aa24.46■■□□□ 1.51
RITA1-201ENST00000548278 ILDR1Q86SU0 546 aaPredicted RBP24.46■■□□□ 1.51
RITA1-201ENST00000548278 FLAD1Q8NFF5 587 aa24.46■■□□□ 1.51
RITA1-201ENST00000548278 FBXO18Q8NFZ0 1043 aa24.46■■□□□ 1.51
RITA1-201ENST00000548278 ZKSCAN3Q9BRR0 538 aa24.46■■□□□ 1.51
RITA1-201ENST00000548278 MYL10Q9BUA6 226 aa24.46■■□□□ 1.51
RITA1-201ENST00000548278 CD209Q9NNX6 404 aa24.46■■□□□ 1.51
RITA1-201ENST00000548278 DCP1AQ9NPI6 582 aaPredicted RBP24.46■■□□□ 1.51
RITA1-201ENST00000548278 CFAP45Q9UL16 551 aa24.46■■□□□ 1.51
RITA1-201ENST00000548278 DUOX1Q9NRD9 1551 aa24.45■■□□□ 1.51
RITA1-201ENST00000548278 LTBP1Q14766 1721 aa24.45■■□□□ 1.5
RITA1-201ENST00000548278 GOLGA8AA7E2F4 631 aa24.45■■□□□ 1.5
RITA1-201ENST00000548278 NASPP49321 788 aaPredicted RBP24.45■■□□□ 1.5
RITA1-201ENST00000548278 WTAPQ15007 396 aa24.45■■□□□ 1.5
RITA1-201ENST00000548278 RGS22Q8NE09 1264 aa24.45■■□□□ 1.5
RITA1-201ENST00000548278 ESR2Q92731 530 aa24.45■■□□□ 1.5
RITA1-201ENST00000548278 ATP8A2Q9NTI2 1148 aa24.45■■□□□ 1.5
RITA1-201ENST00000548278 POLLQ9UGP5 575 aa24.45■■□□□ 1.5
RITA1-201ENST00000548278 USP17L12C9JPN9 530 aa24.44■■□□□ 1.5
RITA1-201ENST00000548278 USP17L21D6R901 530 aa24.44■■□□□ 1.5
RITA1-201ENST00000548278 IL1R1P14778 569 aa24.44■■□□□ 1.5
RITA1-201ENST00000548278 TMC4Q7Z404 712 aa24.44■■□□□ 1.5
RITA1-201ENST00000548278 TBC1D16Q8TBP0 767 aa24.44■■□□□ 1.5
RITA1-201ENST00000548278 MYH2Q9UKX2 1941 aa24.44■■□□□ 1.5
RITA1-201ENST00000548278 TNS1Q9HBL0 1735 aaKnown RBP24.44■■□□□ 1.5
RITA1-201ENST00000548278 PCP11498 1178 aaKnown RBP24.44■■□□□ 1.5
RITA1-201ENST00000548278 GRIK5Q16478 980 aa24.44■■□□□ 1.5
RITA1-201ENST00000548278 ATL3Q6DD88 541 aa24.44■■□□□ 1.5
RITA1-201ENST00000548278 OTUD7BQ6GQQ9 843 aa24.44■■□□□ 1.5
RITA1-201ENST00000548278 CPLX2Q6PUV4 134 aaKnown RBP24.44■■□□□ 1.5
RITA1-201ENST00000548278 CCDC144CPQ8IYA2 1237 aa24.44■■□□□ 1.5
RITA1-201ENST00000548278 TMTC2Q8N394 836 aa24.44■■□□□ 1.5
RITA1-201ENST00000548278 SP8Q8IXZ3 490 aa24.43■■□□□ 1.5
RITA1-201ENST00000548278 LAMB1P07942 1786 aa24.43■■□□□ 1.5
RITA1-201ENST00000548278 ERICH2A1L162 156 aa24.42■■□□□ 1.5
RITA1-201ENST00000548278 LETM1O95202 739 aaPredicted RBP24.42■■□□□ 1.5
RITA1-201ENST00000548278 SEC23AQ15436 765 aa24.42■■□□□ 1.5
RITA1-201ENST00000548278 SYNE3Q6ZMZ3 975 aa24.42■■□□□ 1.5
RITA1-201ENST00000548278 PGBD1Q96JS3 809 aa24.42■■□□□ 1.5
RITA1-201ENST00000548278 UBAC1Q9BSL1 405 aa24.42■■□□□ 1.5
RITA1-201ENST00000548278 PPEF1O14829 653 aaPredicted RBP24.41■■□□□ 1.5
RITA1-201ENST00000548278 RANBP6O60518 1105 aaKnown RBP24.41■■□□□ 1.5
RITA1-201ENST00000548278 SRGNP10124 158 aa24.41■■□□□ 1.5
RITA1-201ENST00000548278 TSPY26PQ9H489 355 aa24.41■■□□□ 1.5
RITA1-201ENST00000548278 GJB4Q9NTQ9 266 aa24.41■■□□□ 1.5
RITA1-201ENST00000548278 RCOR1Q9UKL0 485 aa24.41■■□□□ 1.5
RITA1-201ENST00000548278 DDX52Q9Y2R4 599 aaKnown RBP eCLIP24.41■■□□□ 1.5
RITA1-201ENST00000548278 RCAN1P53805 252 aa24.41■■□□□ 1.5
RITA1-201ENST00000548278 GSTO1P78417 241 aa24.41■■□□□ 1.5
RITA1-201ENST00000548278 SBK1Q52WX2 424 aa24.41■■□□□ 1.5
RITA1-201ENST00000548278 PHKBQ93100 1093 aa24.41■■□□□ 1.5
RITA1-201ENST00000548278 ZNF396Q96N95 335 aaPredicted RBP24.41■■□□□ 1.5
RITA1-201ENST00000548278 ATP6V0A2Q9Y487 856 aa24.41■■□□□ 1.5
RITA1-201ENST00000548278 ECM29Q5VYK3 1845 aa24.4■■□□□ 1.5
RITA1-201ENST00000548278 RGPD3A6NKT7 1758 aaPredicted RBP24.4■■□□□ 1.5
RITA1-201ENST00000548278 RGPD4Q7Z3J3 1758 aa24.4■■□□□ 1.5
RITA1-201ENST00000548278 MMP10P09238 476 aa24.4■■□□□ 1.5
RITA1-201ENST00000548278 LIG1P18858 919 aa24.4■■□□□ 1.5
RITA1-201ENST00000548278 EVX2Q03828 476 aa24.4■■□□□ 1.5
RITA1-201ENST00000548278 USP28Q96RU2 1077 aa24.4■■□□□ 1.5
RITA1-201ENST00000548278 ALG1Q9BT22 464 aa24.4■■□□□ 1.5
RITA1-201ENST00000548278 TNKSO95271 1327 aa24.4■■□□□ 1.5
RITA1-201ENST00000548278 IARSP41252 1262 aaKnown RBP24.39■■□□□ 1.5
RITA1-201ENST00000548278 DIXDC1Q155Q3 683 aa24.39■■□□□ 1.5
RITA1-201ENST00000548278 FTOQ9C0B1 505 aaKnown RBP eCLIP24.39■■□□□ 1.5
RITA1-201ENST00000548278 ARPP21Q9UBL0 812 aaPredicted RBP24.39■■□□□ 1.5
RITA1-201ENST00000548278 MKRN1Q9UHC7 482 aaKnown RBP24.39■■□□□ 1.5
RITA1-201ENST00000548278 STK36Q9NRP7 1315 aa24.39■■□□□ 1.49
RITA1-201ENST00000548278 GOLGA6L4A6NEF3 574 aa24.39■■□□□ 1.49
RITA1-201ENST00000548278 ORC4O43929 436 aa24.39■■□□□ 1.49
RITA1-201ENST00000548278 NPR1P16066 1061 aa24.39■■□□□ 1.49
RITA1-201ENST00000548278 PPP4CP60510 307 aa24.39■■□□□ 1.49
RITA1-201ENST00000548278 KLHL34Q8N239 644 aa24.39■■□□□ 1.49
RITA1-201ENST00000548278 AIFM3Q96NN9 605 aa24.39■■□□□ 1.49
RITA1-201ENST00000548278 ZSCAN10Q96SZ4 725 aaPredicted RBP24.39■■□□□ 1.49
RITA1-201ENST00000548278 PRDM1O75626 825 aa24.38■■□□□ 1.49
RITA1-201ENST00000548278 IFNAR1P17181 557 aa24.38■■□□□ 1.49
RITA1-201ENST00000548278 CEBPZQ03701 1054 aaKnown RBP24.38■■□□□ 1.49
RITA1-201ENST00000548278 ZNF654Q8IZM8 581 aa24.38■■□□□ 1.49
RITA1-201ENST00000548278 C6orf229H3BNL8 230 aa24.38■■□□□ 1.49
RITA1-201ENST00000548278 CYP2D6P10635 497 aa24.38■■□□□ 1.49
RITA1-201ENST00000548278 RTN1Q16799 776 aa24.38■■□□□ 1.49
RITA1-201ENST00000548278 ENAHQ8N8S7 591 aaPredicted RBP24.38■■□□□ 1.49
RITA1-201ENST00000548278 FMNL1O95466 1100 aaPredicted RBP24.37■■□□□ 1.49
RITA1-201ENST00000548278 LDHCP07864 332 aa24.37■■□□□ 1.49
RITA1-201ENST00000548278 BRAPQ7Z569 592 aa24.37■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms