RNA–Protein interactions for RNA: ENST00000545215.5

LDHA-223, Transcript of lactate dehydrogenase A, humanhuman

TSL 1 (best)

Gene LDHA, Length 1,340 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-223ENST00000545215 TEX13AQ9BXU3 409 aaPredicted RBP9.09□□□□□ -0.95
LDHA-223ENST00000545215 NBPF3Q9H094 633 aa9.09□□□□□ -0.95
LDHA-223ENST00000545215 PAK6Q9NQU5 681 aaPredicted RBP9.09□□□□□ -0.95
LDHA-223ENST00000545215 COL3A1P02461 1466 aaPredicted RBP9.09□□□□□ -0.95
LDHA-223ENST00000545215 WDFY4Q6ZS81 3184 aa9.09□□□□□ -0.95
LDHA-223ENST00000545215 ACTN4O43707 911 aaKnown RBP9.08□□□□□ -0.96
LDHA-223ENST00000545215 TLR2O60603 784 aa9.08□□□□□ -0.96
LDHA-223ENST00000545215 CTGFP29279 349 aa9.08□□□□□ -0.96
LDHA-223ENST00000545215 ZEB1P37275 1124 aaPredicted RBP9.08□□□□□ -0.96
LDHA-223ENST00000545215 SEMA3FQ13275 785 aa9.08□□□□□ -0.96
LDHA-223ENST00000545215 SIN3AQ96ST3 1273 aa9.08□□□□□ -0.96
LDHA-223ENST00000545215 DBNDD1Q9H9R9 158 aa9.08□□□□□ -0.96
LDHA-223ENST00000545215 SLC27A5Q9Y2P5 690 aa9.08□□□□□ -0.96
LDHA-223ENST00000545215 MAFBQ9Y5Q3 323 aaPredicted RBP9.08□□□□□ -0.96
LDHA-223ENST00000545215 ABCC12Q96J65 1359 aa9.08□□□□□ -0.96
LDHA-223ENST00000545215 PPM1GO15355 546 aaPredicted RBP9.07□□□□□ -0.96
LDHA-223ENST00000545215 RNF40O75150 1001 aa9.07□□□□□ -0.96
LDHA-223ENST00000545215 ATG7O95352 703 aa9.07□□□□□ -0.96
LDHA-223ENST00000545215 A1BGP04217 495 aa9.07□□□□□ -0.96
LDHA-223ENST00000545215 MFAP1P55081 439 aaKnown RBP9.07□□□□□ -0.96
LDHA-223ENST00000545215 Q3C1V9 767 aa9.07□□□□□ -0.96
LDHA-223ENST00000545215 LYPD8Q6UX82 237 aa9.07□□□□□ -0.96
LDHA-223ENST00000545215 PNMA1Q8ND90 353 aa9.07□□□□□ -0.96
LDHA-223ENST00000545215 ZFRQ96KR1 1074 aaKnown RBP9.07□□□□□ -0.96
LDHA-223ENST00000545215 PUS7Q96PZ0 661 aaKnown RBP9.07□□□□□ -0.96
LDHA-223ENST00000545215 MYOZ2Q9NPC6 264 aa9.07□□□□□ -0.96
LDHA-223ENST00000545215 CXXC1Q9P0U4 656 aaPredicted RBP9.07□□□□□ -0.96
LDHA-223ENST00000545215 FZD1Q9UP38 647 aa9.07□□□□□ -0.96
LDHA-223ENST00000545215 C5orf42Q9H799 3197 aa9.07□□□□□ -0.96
LDHA-223ENST00000545215 ROCK2O75116 1388 aaKnown RBP9.07□□□□□ -0.96
LDHA-223ENST00000545215 ADGRA2Q96PE1 1338 aa9.07□□□□□ -0.96
LDHA-223ENST00000545215 PSMC4P43686 418 aa9.06□□□□□ -0.96
LDHA-223ENST00000545215 SHHQ15465 462 aa9.06□□□□□ -0.96
LDHA-223ENST00000545215 PUS10Q3MIT2 529 aaKnown RBP9.06□□□□□ -0.96
LDHA-223ENST00000545215 NYXQ9GZU5 481 aa9.06□□□□□ -0.96
LDHA-223ENST00000545215 C11orf49Q9H6J7 331 aa9.06□□□□□ -0.96
LDHA-223ENST00000545215 LGR6Q9HBX8 967 aa9.06□□□□□ -0.96
LDHA-223ENST00000545215 MYPNQ86TC9 1320 aa9.06□□□□□ -0.96
LDHA-223ENST00000545215 CARNS1A5YM72 827 aa9.05□□□□□ -0.96
LDHA-223ENST00000545215 BBOX1O75936 387 aa9.05□□□□□ -0.96
LDHA-223ENST00000545215 EIF4G2P78344 907 aaKnown RBP eCLIP9.05□□□□□ -0.96
LDHA-223ENST00000545215 NR1H3Q13133 447 aa9.05□□□□□ -0.96
LDHA-223ENST00000545215 TBC1D9Q6ZT07 1266 aa9.05□□□□□ -0.96
LDHA-223ENST00000545215 AGBL3Q8NEM8 1001 aa9.05□□□□□ -0.96
LDHA-223ENST00000545215 BRI3BPQ8WY22 251 aa9.05□□□□□ -0.96
LDHA-223ENST00000545215 LBHD1Q9BQE6 289 aaPredicted RBP9.05□□□□□ -0.96
LDHA-223ENST00000545215 SPTBN4Q9H254 2564 aa9.05□□□□□ -0.96
LDHA-223ENST00000545215 ATP9BO43861 1147 aa9.05□□□□□ -0.96
LDHA-223ENST00000545215 ECE2O60344 883 aa9.05□□□□□ -0.96
LDHA-223ENST00000545215 PDE3AQ14432 1141 aa9.05□□□□□ -0.96
LDHA-223ENST00000545215 AAK1Q2M2I8 961 aa9.05□□□□□ -0.96
LDHA-223ENST00000545215 NBPF9Q3BBW0 867 aa9.05□□□□□ -0.96
LDHA-223ENST00000545215 FAM43AQ8N2R8 423 aa9.05□□□□□ -0.96
LDHA-223ENST00000545215 MTMR7Q9Y216 660 aa9.05□□□□□ -0.96
LDHA-223ENST00000545215 UBR2Q8IWV8 1755 aa9.04□□□□□ -0.96
LDHA-223ENST00000545215 EPG5Q9HCE0 2579 aa9.04□□□□□ -0.96
LDHA-223ENST00000545215 WDHD1O75717 1129 aaPredicted RBP9.04□□□□□ -0.96
LDHA-223ENST00000545215 FMNL1O95466 1100 aaPredicted RBP9.04□□□□□ -0.96
LDHA-223ENST00000545215 TNNT2P45379 298 aaPredicted RBP9.04□□□□□ -0.96
LDHA-223ENST00000545215 EIF4A2Q14240 407 aaKnown RBP9.04□□□□□ -0.96
LDHA-223ENST00000545215 ZNF687Q8N1G0 1237 aa9.04□□□□□ -0.96
LDHA-223ENST00000545215 GMLQ99445 158 aa9.04□□□□□ -0.96
LDHA-223ENST00000545215 GAS2L1Q99501 681 aaPredicted RBP9.04□□□□□ -0.96
LDHA-223ENST00000545215 ATRXP46100 2492 aa9.03□□□□□ -0.96
LDHA-223ENST00000545215 DUOX1Q9NRD9 1551 aa9.03□□□□□ -0.96
LDHA-223ENST00000545215 LAMB2P55268 1798 aa9.03□□□□□ -0.96
LDHA-223ENST00000545215 XIRP2A4UGR9 3374 aa9.03□□□□□ -0.96
LDHA-223ENST00000545215 TK2O00142 265 aa9.03□□□□□ -0.96
LDHA-223ENST00000545215 INHAP05111 366 aa9.03□□□□□ -0.96
LDHA-223ENST00000545215 FBXO45P0C2W1 286 aa9.03□□□□□ -0.96
LDHA-223ENST00000545215 KCNQ1P51787 676 aa9.03□□□□□ -0.96
LDHA-223ENST00000545215 CCDC85BQ15834 202 aaPredicted RBP9.03□□□□□ -0.96
LDHA-223ENST00000545215 CDCA8Q53HL2 280 aa9.03□□□□□ -0.96
LDHA-223ENST00000545215 C9orf50Q5SZB4 431 aa9.03□□□□□ -0.96
LDHA-223ENST00000545215 C17orf99Q6UX52 265 aa9.03□□□□□ -0.96
LDHA-223ENST00000545215 RNF19BQ6ZMZ0 732 aa9.03□□□□□ -0.96
LDHA-223ENST00000545215 UIMC1Q96RL1 719 aa9.03□□□□□ -0.96
LDHA-223ENST00000545215 SALL2Q9Y467 1007 aaPredicted RBP9.03□□□□□ -0.96
LDHA-223ENST00000545215 HEG1Q9ULI3 1381 aa9.02□□□□□ -0.97
LDHA-223ENST00000545215 UNC79Q9P2D8 2635 aa9.02□□□□□ -0.97
LDHA-223ENST00000545215 PFASO15067 1338 aa9.02□□□□□ -0.97
LDHA-223ENST00000545215 ABCC4O15439 1325 aa9.02□□□□□ -0.97
LDHA-223ENST00000545215 PPP1R12BO60237 982 aaPredicted RBP9.02□□□□□ -0.97
LDHA-223ENST00000545215 ADCY3O60266 1144 aa9.02□□□□□ -0.97
LDHA-223ENST00000545215 TFF2Q03403 129 aa9.02□□□□□ -0.97
LDHA-223ENST00000545215 PRKCZQ05513 592 aa9.02□□□□□ -0.97
LDHA-223ENST00000545215 ACAP1Q15027 740 aa9.02□□□□□ -0.97
LDHA-223ENST00000545215 BRICD5Q6PL45 260 aa9.02□□□□□ -0.97
LDHA-223ENST00000545215 BLOC1S3Q6QNY0 202 aa9.02□□□□□ -0.97
LDHA-223ENST00000545215 USB1Q9BQ65 265 aaKnown RBP9.02□□□□□ -0.97
LDHA-223ENST00000545215 PRR14Q9BWN1 585 aa9.02□□□□□ -0.97
LDHA-223ENST00000545215 CARD11Q9BXL7 1154 aa9.02□□□□□ -0.97
LDHA-223ENST00000545215 ZNF576Q9H609 170 aa9.02□□□□□ -0.97
LDHA-223ENST00000545215 VRTNQ9H8Y1 702 aa9.02□□□□□ -0.97
LDHA-223ENST00000545215 CCL15-CCL14A0A0B4J2E2 113 aa9.01□□□□□ -0.97
LDHA-223ENST00000545215 ZBBXA8MT70 800 aa9.01□□□□□ -0.97
LDHA-223ENST00000545215 RNMTO43148 476 aaKnown RBP9.01□□□□□ -0.97
LDHA-223ENST00000545215 F12P00748 615 aaPredicted RBP9.01□□□□□ -0.97
LDHA-223ENST00000545215 GTF2A2P52657 109 aa9.01□□□□□ -0.97
LDHA-223ENST00000545215 HLFQ16534 295 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms