RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 UBE3CQ15386 1083 aa23.17■■□□□ 1.3
DDX55-211ENST00000544429 ARMC9Q7Z3E5 817 aa23.17■■□□□ 1.3
DDX55-211ENST00000544429 PLEKHM2Q8IWE5 1019 aa23.17■■□□□ 1.3
DDX55-211ENST00000544429 NOL10Q9BSC4 688 aaKnown RBP23.17■■□□□ 1.3
DDX55-211ENST00000544429 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.17■■□□□ 1.3
DDX55-211ENST00000544429 FAM155AB1AL88 458 aaPredicted RBP23.16■■□□□ 1.3
DDX55-211ENST00000544429 UBE2Q2LH0YL09 131 aa23.16■■□□□ 1.3
DDX55-211ENST00000544429 PPP1R12BO60237 982 aaPredicted RBP23.16■■□□□ 1.3
DDX55-211ENST00000544429 MAP3K10Q02779 954 aa23.16■■□□□ 1.3
DDX55-211ENST00000544429 CYP4F22Q6NT55 531 aa23.16■■□□□ 1.3
DDX55-211ENST00000544429 RGMBQ6NW40 437 aa23.16■■□□□ 1.3
DDX55-211ENST00000544429 TEX11Q8IYF3 940 aa23.16■■□□□ 1.3
DDX55-211ENST00000544429 MIGA1Q8NAN2 632 aa23.16■■□□□ 1.3
DDX55-211ENST00000544429 CAPNS2Q96L46 248 aa23.16■■□□□ 1.3
DDX55-211ENST00000544429 WDR33Q9C0J8 1336 aaKnown RBP23.15■■□□□ 1.3
DDX55-211ENST00000544429 CHGBP05060 677 aa23.15■■□□□ 1.3
DDX55-211ENST00000544429 SLFNL1Q499Z3 407 aa23.15■■□□□ 1.3
DDX55-211ENST00000544429 HOOK2Q96ED9 719 aa23.15■■□□□ 1.3
DDX55-211ENST00000544429 OSBPL5Q9H0X9 879 aaPredicted RBP23.15■■□□□ 1.3
DDX55-211ENST00000544429 ANGEL1Q9UNK9 670 aaKnown RBP23.15■■□□□ 1.3
DDX55-211ENST00000544429 MYH1P12882 1939 aa23.14■■□□□ 1.3
DDX55-211ENST00000544429 DDTLA6NHG4 134 aaPredicted RBP23.14■■□□□ 1.29
DDX55-211ENST00000544429 PDE4AP27815 886 aa23.14■■□□□ 1.29
DDX55-211ENST00000544429 ECE1P42892 770 aa23.14■■□□□ 1.29
DDX55-211ENST00000544429 DDX55Q8NHQ9 600 aaKnown RBP eCLIP23.14■■□□□ 1.29
DDX55-211ENST00000544429 FLT1P17948 1338 aa23.13■■□□□ 1.29
DDX55-211ENST00000544429 SLC10A3P09131 477 aa23.13■■□□□ 1.29
DDX55-211ENST00000544429 PICALMQ13492 652 aa23.13■■□□□ 1.29
DDX55-211ENST00000544429 PRKG1Q13976 671 aa23.13■■□□□ 1.29
DDX55-211ENST00000544429 TTLL12Q14166 644 aaPredicted RBP23.13■■□□□ 1.29
DDX55-211ENST00000544429 ZSCAN25Q6NSZ9 544 aa23.13■■□□□ 1.29
DDX55-211ENST00000544429 MAGEB6P1A0A0J9YX57 407 aa23.12■■□□□ 1.29
DDX55-211ENST00000544429 IREB2P48200 963 aaKnown RBP23.12■■□□□ 1.29
DDX55-211ENST00000544429 RASAL3Q86YV0 1011 aa23.12■■□□□ 1.29
DDX55-211ENST00000544429 TGFBRAP1Q8WUH2 860 aa23.12■■□□□ 1.29
DDX55-211ENST00000544429 CSRNP1Q96S65 589 aa23.12■■□□□ 1.29
DDX55-211ENST00000544429 ZNF112Q9UJU3 913 aa23.12■■□□□ 1.29
DDX55-211ENST00000544429 NAV1Q8NEY1 1877 aa23.11■■□□□ 1.29
DDX55-211ENST00000544429 ZFYP08048 801 aaPredicted RBP23.11■■□□□ 1.29
DDX55-211ENST00000544429 ZNF157P51786 506 aaPredicted RBP23.11■■□□□ 1.29
DDX55-211ENST00000544429 DCAF15Q66K64 600 aa23.11■■□□□ 1.29
DDX55-211ENST00000544429 PPP1R3FQ6ZSY5 799 aaPredicted RBP23.11■■□□□ 1.29
DDX55-211ENST00000544429 TICAM2Q86XR7 235 aa23.11■■□□□ 1.29
DDX55-211ENST00000544429 CCDC102AQ96A19 550 aa23.11■■□□□ 1.29
DDX55-211ENST00000544429 TBC1D12O60347 775 aa23.1■■□□□ 1.29
DDX55-211ENST00000544429 MAP2K2P36507 400 aa23.1■■□□□ 1.29
DDX55-211ENST00000544429 METTL16Q86W50 562 aaKnown RBP23.1■■□□□ 1.29
DDX55-211ENST00000544429 ANKRD13AQ8IZ07 590 aa23.1■■□□□ 1.29
DDX55-211ENST00000544429 LCORLQ8N3X6 602 aa23.1■■□□□ 1.29
DDX55-211ENST00000544429 EVI5LQ96CN4 794 aa23.1■■□□□ 1.29
DDX55-211ENST00000544429 CLMNQ96JQ2 1002 aa23.1■■□□□ 1.29
DDX55-211ENST00000544429 PUS7LQ9H0K6 701 aaKnown RBP23.1■■□□□ 1.29
DDX55-211ENST00000544429 RNF113AO15541 343 aaKnown RBP23.09■■□□□ 1.29
DDX55-211ENST00000544429 NOGQ13253 232 aa23.09■■□□□ 1.29
DDX55-211ENST00000544429 MIGA2Q7L4E1 593 aa23.09■■□□□ 1.29
DDX55-211ENST00000544429 MAPKAPK5Q8IW41 473 aa23.09■■□□□ 1.29
DDX55-211ENST00000544429 APPBP2Q92624 585 aa23.09■■□□□ 1.29
DDX55-211ENST00000544429 ZNF341Q9BYN7 854 aa23.09■■□□□ 1.29
DDX55-211ENST00000544429 DHX36Q9H2U1 1008 aaKnown RBP23.09■■□□□ 1.29
DDX55-211ENST00000544429 PHF20L1A8MW92 1017 aa23.08■■□□□ 1.29
DDX55-211ENST00000544429 OSBP2Q969R2 916 aa23.08■■□□□ 1.29
DDX55-211ENST00000544429 AOC2O75106 756 aa23.07■■□□□ 1.28
DDX55-211ENST00000544429 MBD4O95243 580 aa23.07■■□□□ 1.28
DDX55-211ENST00000544429 MAP3K9P80192 1104 aa23.07■■□□□ 1.28
DDX55-211ENST00000544429 VGLL4Q14135 290 aa23.07■■□□□ 1.28
DDX55-211ENST00000544429 PAXIP1Q6ZW49 1069 aaPredicted RBP23.07■■□□□ 1.28
DDX55-211ENST00000544429 CENPQQ7L2Z9 268 aaPredicted RBP23.07■■□□□ 1.28
DDX55-211ENST00000544429 ZSCAN29Q8IWY8 852 aaPredicted RBP23.07■■□□□ 1.28
DDX55-211ENST00000544429 ZIC5Q96T25 663 aa23.07■■□□□ 1.28
DDX55-211ENST00000544429 CRNKL1Q9BZJ0 848 aaKnown RBP23.07■■□□□ 1.28
DDX55-211ENST00000544429 ARMT1Q9H993 441 aa23.07■■□□□ 1.28
DDX55-211ENST00000544429 BAZ2AQ9UIF9 1905 aaKnown RBP23.06■■□□□ 1.28
DDX55-211ENST00000544429 SLURP2P0DP57 97 aa23.06■■□□□ 1.28
DDX55-211ENST00000544429 LRRFIP1Q32MZ4 808 aaKnown RBP23.06■■□□□ 1.28
DDX55-211ENST00000544429 WRNIP1Q96S55 665 aa23.06■■□□□ 1.28
DDX55-211ENST00000544429 FSD1Q9BTV5 496 aa23.06■■□□□ 1.28
DDX55-211ENST00000544429 PI4KBQ9UBF8 816 aa23.06■■□□□ 1.28
DDX55-211ENST00000544429 NEFLP07196 543 aa23.05■■□□□ 1.28
DDX55-211ENST00000544429 ZMYM1Q5SVZ6 1142 aa23.05■■□□□ 1.28
DDX55-211ENST00000544429 NOL9Q5SY16 702 aaKnown RBP23.05■■□□□ 1.28
DDX55-211ENST00000544429 SLC10A4Q96EP9 437 aa23.05■■□□□ 1.28
DDX55-211ENST00000544429 STRBPQ96SI9 672 aaKnown RBP23.05■■□□□ 1.28
DDX55-211ENST00000544429 DCP1AQ9NPI6 582 aaPredicted RBP23.05■■□□□ 1.28
DDX55-211ENST00000544429 PALD1Q9ULE6 856 aa23.05■■□□□ 1.28
DDX55-211ENST00000544429 SNCAIPQ9Y6H5 919 aa23.05■■□□□ 1.28
DDX55-211ENST00000544429 DOCK1Q14185 1865 aa23.05■■□□□ 1.28
DDX55-211ENST00000544429 INPP5BP32019 993 aa23.04■■□□□ 1.28
DDX55-211ENST00000544429 USP5P45974 858 aa23.04■■□□□ 1.28
DDX55-211ENST00000544429 ERICH6BQ5W0A0 696 aa23.04■■□□□ 1.28
DDX55-211ENST00000544429 SPRYD7Q5W111 196 aa23.04■■□□□ 1.28
DDX55-211ENST00000544429 SDR42E1Q8WUS8 393 aa23.04■■□□□ 1.28
DDX55-211ENST00000544429 HERC5Q9UII4 1024 aaKnown RBP23.04■■□□□ 1.28
DDX55-211ENST00000544429 PHIPQ8WWQ0 1821 aa23.03■■□□□ 1.28
DDX55-211ENST00000544429 ATAD5Q96QE3 1844 aa23.03■■□□□ 1.28
DDX55-211ENST00000544429 PRKAB2O43741 272 aa23.03■■□□□ 1.28
DDX55-211ENST00000544429 ZBTB48P10074 688 aaPredicted RBP23.03■■□□□ 1.28
DDX55-211ENST00000544429 GJA5P36382 358 aa23.03■■□□□ 1.28
DDX55-211ENST00000544429 GRM1Q13255 1194 aa23.03■■□□□ 1.28
DDX55-211ENST00000544429 ZKSCAN4Q969J2 545 aaPredicted RBP23.03■■□□□ 1.28
DDX55-211ENST00000544429 AIDAQ96BJ3 306 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 183.5 ms