RNA–Protein interactions for RNA: ENST00000541366.1

COPA-205, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 616 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-205ENST00000541366 ZMYND8Q9ULU4 1186 aaPredicted RBP14.87□□□□□ -0.03
COPA-205ENST00000541366 MAST3O60307 1309 aa14.87□□□□□ -0.03
COPA-205ENST00000541366 CXCL11O14625 94 aa14.86□□□□□ -0.03
COPA-205ENST00000541366 GADL1Q6ZQY3 521 aa14.86□□□□□ -0.03
COPA-205ENST00000541366 ANKRD44Q8N8A2 993 aa14.86□□□□□ -0.03
COPA-205ENST00000541366 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.86□□□□□ -0.03
COPA-205ENST00000541366 ZHX2Q9Y6X8 837 aa14.86□□□□□ -0.03
COPA-205ENST00000541366 A0A0G2JLL6 359 aaPredicted RBP14.85□□□□□ -0.03
COPA-205ENST00000541366 PHF20L1A8MW92 1017 aa14.85□□□□□ -0.03
COPA-205ENST00000541366 TNPO2O14787 897 aaKnown RBP14.85□□□□□ -0.03
COPA-205ENST00000541366 FGFR2P21802 821 aa14.85□□□□□ -0.03
COPA-205ENST00000541366 PRRT2Q7Z6L0 340 aaPredicted RBP14.85□□□□□ -0.03
COPA-205ENST00000541366 CCDC84Q86UT8 332 aaPredicted RBP14.85□□□□□ -0.03
COPA-205ENST00000541366 C7orf61Q8IZ16 206 aa14.85□□□□□ -0.03
COPA-205ENST00000541366 GDF15Q99988 308 aa14.85□□□□□ -0.03
COPA-205ENST00000541366 PAK6Q9NQU5 681 aaPredicted RBP14.85□□□□□ -0.03
COPA-205ENST00000541366 SUGT1Q9Y2Z0 365 aa14.85□□□□□ -0.03
COPA-205ENST00000541366 SYN1P17600 705 aa14.84□□□□□ -0.03
COPA-205ENST00000541366 PTPRAP18433 802 aa14.84□□□□□ -0.03
COPA-205ENST00000541366 PRDX5P30044 214 aa14.84□□□□□ -0.03
COPA-205ENST00000541366 MNX1P50219 401 aaPredicted RBP14.84□□□□□ -0.03
COPA-205ENST00000541366 RABL6Q3YEC7 729 aaPredicted RBP14.84□□□□□ -0.03
COPA-205ENST00000541366 DEFB123Q8N688 67 aa14.84□□□□□ -0.03
COPA-205ENST00000541366 PXYLP1Q8TE99 480 aa14.84□□□□□ -0.03
COPA-205ENST00000541366 CRISPLD2Q9H0B8 497 aa14.84□□□□□ -0.03
COPA-205ENST00000541366 USP40Q9NVE5 1235 aa14.84□□□□□ -0.03
COPA-205ENST00000541366 VCANP13611 3396 aa14.84□□□□□ -0.03
COPA-205ENST00000541366 PTPRFP10586 1907 aa14.84□□□□□ -0.03
COPA-205ENST00000541366 ATRNL1Q5VV63 1379 aa14.84□□□□□ -0.03
COPA-205ENST00000541366 MYH13Q9UKX3 1938 aa14.84□□□□□ -0.03
COPA-205ENST00000541366 LAMA2P24043 3122 aaKnown RBP14.83□□□□□ -0.03
COPA-205ENST00000541366 AFG3L2Q9Y4W6 797 aa14.83□□□□□ -0.04
COPA-205ENST00000541366 UTYO14607 1347 aa14.83□□□□□ -0.04
COPA-205ENST00000541366 IFIT1P09914 478 aaKnown RBP14.82□□□□□ -0.04
COPA-205ENST00000541366 ZEB1P37275 1124 aaPredicted RBP14.82□□□□□ -0.04
COPA-205ENST00000541366 TRIM32Q13049 653 aa14.82□□□□□ -0.04
COPA-205ENST00000541366 IRF5Q13568 498 aa14.82□□□□□ -0.04
COPA-205ENST00000541366 PUM3Q15397 648 aaKnown RBP14.82□□□□□ -0.04
COPA-205ENST00000541366 SH3BP5LQ7L8J4 393 aa14.82□□□□□ -0.04
COPA-205ENST00000541366 FASTKD5Q7L8L6 764 aaKnown RBP14.82□□□□□ -0.04
COPA-205ENST00000541366 NECAB2Q7Z6G3 386 aa14.82□□□□□ -0.04
COPA-205ENST00000541366 SCYL3Q8IZE3 742 aa14.82□□□□□ -0.04
COPA-205ENST00000541366 ANKRD13CQ8N6S4 541 aa14.82□□□□□ -0.04
COPA-205ENST00000541366 WDR66Q8TBY9 1149 aa14.82□□□□□ -0.04
COPA-205ENST00000541366 SMCR8Q8TEV9 937 aaPredicted RBP14.82□□□□□ -0.04
COPA-205ENST00000541366 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.82□□□□□ -0.04
COPA-205ENST00000541366 TRIM75PA6NK02 468 aa14.81□□□□□ -0.04
COPA-205ENST00000541366 BMP8BP34820 402 aa14.81□□□□□ -0.04
COPA-205ENST00000541366 RGS3P49796 1198 aa14.81□□□□□ -0.04
COPA-205ENST00000541366 TREML2Q5T2D2 321 aa14.81□□□□□ -0.04
COPA-205ENST00000541366 WDR63Q8IWG1 891 aa14.81□□□□□ -0.04
COPA-205ENST00000541366 PICK1Q9NRD5 415 aa14.81□□□□□ -0.04
COPA-205ENST00000541366 PHIPQ8WWQ0 1821 aa14.8□□□□□ -0.04
COPA-205ENST00000541366 DOCK2Q92608 1830 aa14.8□□□□□ -0.04
COPA-205ENST00000541366 DDTLA6NHG4 134 aaPredicted RBP14.8□□□□□ -0.04
COPA-205ENST00000541366 ATXN8OSP0DMR3 200 aa14.8□□□□□ -0.04
COPA-205ENST00000541366 MAGEA10P43363 369 aaPredicted RBP14.8□□□□□ -0.04
COPA-205ENST00000541366 MTMR10Q9NXD2 777 aa14.8□□□□□ -0.04
COPA-205ENST00000541366 EYSQ5T1H1 3165 aa14.8□□□□□ -0.04
COPA-205ENST00000541366 LDHBP07195 334 aaKnown RBP14.79□□□□□ -0.04
COPA-205ENST00000541366 SLC5A1P13866 664 aa14.79□□□□□ -0.04
COPA-205ENST00000541366 COA7Q96BR5 231 aa14.79□□□□□ -0.04
COPA-205ENST00000541366 KIF16BQ96L93 1317 aa14.79□□□□□ -0.04
COPA-205ENST00000541366 COL25A1Q9BXS0 654 aaPredicted RBP14.79□□□□□ -0.04
COPA-205ENST00000541366 DDX4Q9NQI0 724 aaKnown RBP14.79□□□□□ -0.04
COPA-205ENST00000541366 STXBP5LQ9Y2K9 1186 aa14.79□□□□□ -0.04
COPA-205ENST00000541366 SLC45A1Q9Y2W3 748 aa14.79□□□□□ -0.04
COPA-205ENST00000541366 RFX5P48382 616 aaPredicted RBP14.78□□□□□ -0.04
COPA-205ENST00000541366 GPR153Q6NV75 609 aa14.78□□□□□ -0.04
COPA-205ENST00000541366 ZSCAN29Q8IWY8 852 aaPredicted RBP14.78□□□□□ -0.04
COPA-205ENST00000541366 LPIN2Q92539 896 aa14.78□□□□□ -0.04
COPA-205ENST00000541366 LRRFIP2Q9Y608 721 aaKnown RBP14.78□□□□□ -0.04
COPA-205ENST00000541366 MYH2Q9UKX2 1941 aa14.78□□□□□ -0.04
COPA-205ENST00000541366 DOCK1Q14185 1865 aa14.78□□□□□ -0.04
COPA-205ENST00000541366 DDX60LQ5H9U9 1706 aaKnown RBP14.78□□□□□ -0.04
COPA-205ENST00000541366 FAM196BA6NMK8 535 aa14.77□□□□□ -0.05
COPA-205ENST00000541366 EYA2O00167 538 aa14.77□□□□□ -0.05
COPA-205ENST00000541366 HMGCRP04035 888 aa14.77□□□□□ -0.05
COPA-205ENST00000541366 LRIT3Q3SXY7 679 aa14.77□□□□□ -0.05
COPA-205ENST00000541366 ATG9AQ7Z3C6 839 aa14.77□□□□□ -0.05
COPA-205ENST00000541366 TDHQ8IZJ6 230 aa14.77□□□□□ -0.05
COPA-205ENST00000541366 NBPF3Q9H094 633 aa14.77□□□□□ -0.05
COPA-205ENST00000541366 GJD2Q9UKL4 321 aa14.77□□□□□ -0.05
COPA-205ENST00000541366 AGTPBP1Q9UPW5 1226 aa14.77□□□□□ -0.05
COPA-205ENST00000541366 DNAH12Q6ZR08 3092 aa14.77□□□□□ -0.05
COPA-205ENST00000541366 RFX7Q2KHR2 1363 aa14.76□□□□□ -0.05
COPA-205ENST00000541366 PEX10O60683 326 aa14.76□□□□□ -0.05
COPA-205ENST00000541366 CTNND1O60716 968 aaKnown RBP14.76□□□□□ -0.05
COPA-205ENST00000541366 ENTPD3O75355 529 aa14.76□□□□□ -0.05
COPA-205ENST00000541366 PHKA1P46020 1223 aa14.76□□□□□ -0.05
COPA-205ENST00000541366 MAP3K10Q02779 954 aa14.76□□□□□ -0.05
COPA-205ENST00000541366 PICALMQ13492 652 aa14.76□□□□□ -0.05
COPA-205ENST00000541366 FAM110CQ1W6H9 321 aa14.76□□□□□ -0.05
COPA-205ENST00000541366 ANKLE1Q8NAG6 615 aa14.76□□□□□ -0.05
COPA-205ENST00000541366 IDI2Q9BXS1 227 aa14.76□□□□□ -0.05
COPA-205ENST00000541366 UBE2OQ9C0C9 1292 aaKnown RBP14.76□□□□□ -0.05
COPA-205ENST00000541366 USP44Q9H0E7 712 aa14.76□□□□□ -0.05
COPA-205ENST00000541366 SIL1Q9H173 461 aa14.76□□□□□ -0.05
COPA-205ENST00000541366 C11orf49Q9H6J7 331 aa14.76□□□□□ -0.05
COPA-205ENST00000541366 PFASO15067 1338 aa14.75□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 124.9 ms