RNA–Protein interactions for RNA: ENST00000541122.6

SMARCA4-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS P4 TSL 5 BASIC

Gene SMARCA4, Length 5,139 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-207ENST00000541122 SV2BQ7L1I2 683 aa16.74■□□□□ 0.27
SMARCA4-207ENST00000541122 PHACTR3Q96KR7 559 aa16.74■□□□□ 0.27
SMARCA4-207ENST00000541122 PZPP20742 1482 aa16.74■□□□□ 0.27
SMARCA4-207ENST00000541122 VWA3AA6NCI4 1184 aa16.74■□□□□ 0.27
SMARCA4-207ENST00000541122 GPTP24298 496 aa16.74■□□□□ 0.27
SMARCA4-207ENST00000541122 SLC9C1Q4G0N8 1177 aa16.74■□□□□ 0.27
SMARCA4-207ENST00000541122 PNMA8AQ86V59 439 aaPredicted RBP16.74■□□□□ 0.27
SMARCA4-207ENST00000541122 E7EVH7 732 aa16.73■□□□□ 0.27
SMARCA4-207ENST00000541122 VCX3BQ9H321 246 aa16.73■□□□□ 0.27
SMARCA4-207ENST00000541122 EFCC1Q9HA90 598 aa16.73■□□□□ 0.27
SMARCA4-207ENST00000541122 NPATQ14207 1427 aa16.73■□□□□ 0.27
SMARCA4-207ENST00000541122 HLA-DOAP06340 250 aa16.73■□□□□ 0.27
SMARCA4-207ENST00000541122 LRMPQ12912 555 aa16.73■□□□□ 0.27
SMARCA4-207ENST00000541122 EFCAB13Q8IY85 973 aa16.73■□□□□ 0.27
SMARCA4-207ENST00000541122 PYCARDQ9ULZ3 195 aa16.73■□□□□ 0.27
SMARCA4-207ENST00000541122 MTMR6Q9Y217 621 aa16.73■□□□□ 0.27
SMARCA4-207ENST00000541122 AMOTL2Q9Y2J4 779 aa16.73■□□□□ 0.27
SMARCA4-207ENST00000541122 POLR2DO15514 142 aaKnown RBP16.73■□□□□ 0.27
SMARCA4-207ENST00000541122 PPP2R5BQ15173 497 aa16.73■□□□□ 0.27
SMARCA4-207ENST00000541122 CCDC65Q8IXS2 484 aa16.73■□□□□ 0.27
SMARCA4-207ENST00000541122 CD109Q6YHK3 1445 aa16.73■□□□□ 0.27
SMARCA4-207ENST00000541122 ABCC4O15439 1325 aa16.73■□□□□ 0.27
SMARCA4-207ENST00000541122 MAGEA1P43355 309 aa16.73■□□□□ 0.27
SMARCA4-207ENST00000541122 CSGALNACT2Q8N6G5 542 aa16.73■□□□□ 0.27
SMARCA4-207ENST00000541122 CAPS2Q9BXY5 557 aa16.73■□□□□ 0.27
SMARCA4-207ENST00000541122 ANGEL1Q9UNK9 670 aaKnown RBP16.73■□□□□ 0.27
SMARCA4-207ENST00000541122 RBM6P78332 1123 aaKnown RBP16.72■□□□□ 0.27
SMARCA4-207ENST00000541122 TRIM35Q9UPQ4 493 aa16.72■□□□□ 0.27
SMARCA4-207ENST00000541122 ABCC2Q92887 1545 aa16.72■□□□□ 0.27
SMARCA4-207ENST00000541122 KDM5DQ9BY66 1539 aa16.72■□□□□ 0.27
SMARCA4-207ENST00000541122 RAPGEF1Q13905 1077 aa16.72■□□□□ 0.27
SMARCA4-207ENST00000541122 VSIG1Q86XK7 387 aa16.72■□□□□ 0.27
SMARCA4-207ENST00000541122 RRP36Q96EU6 259 aaKnown RBP16.72■□□□□ 0.27
SMARCA4-207ENST00000541122 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.72■□□□□ 0.27
SMARCA4-207ENST00000541122 A0A1W2PP64 1363 aa16.72■□□□□ 0.27
SMARCA4-207ENST00000541122 TMEM110-MUSTN1A8MSY1 372 aa16.72■□□□□ 0.27
SMARCA4-207ENST00000541122 MIPOL1Q8TD10 442 aa16.72■□□□□ 0.27
SMARCA4-207ENST00000541122 ZNF608Q9ULD9 1512 aaPredicted RBP16.72■□□□□ 0.27
SMARCA4-207ENST00000541122 SYCE1Q8N0S2 351 aa16.72■□□□□ 0.27
SMARCA4-207ENST00000541122 TRIML1Q8N9V2 468 aa16.72■□□□□ 0.27
SMARCA4-207ENST00000541122 TRIM58Q8NG06 486 aa16.72■□□□□ 0.27
SMARCA4-207ENST00000541122 MAGEB6P1A0A0J9YX57 407 aa16.71■□□□□ 0.27
SMARCA4-207ENST00000541122 GSPT1P15170 499 aaKnown RBP16.71■□□□□ 0.27
SMARCA4-207ENST00000541122 ASIC2Q16515 512 aa16.71■□□□□ 0.27
SMARCA4-207ENST00000541122 CCDC84Q86UT8 332 aaPredicted RBP16.71■□□□□ 0.27
SMARCA4-207ENST00000541122 RRP15Q9Y3B9 282 aaKnown RBP16.71■□□□□ 0.27
SMARCA4-207ENST00000541122 PHLPP2Q6ZVD8 1323 aa16.71■□□□□ 0.27
SMARCA4-207ENST00000541122 UBL4BQ8N7F7 174 aa16.71■□□□□ 0.27
SMARCA4-207ENST00000541122 SLF1Q9BQI6 1058 aa16.71■□□□□ 0.27
SMARCA4-207ENST00000541122 ZPR1O75312 459 aa16.71■□□□□ 0.27
SMARCA4-207ENST00000541122 RASSF2P50749 326 aa16.71■□□□□ 0.27
SMARCA4-207ENST00000541122 CCDC63Q8NA47 563 aa16.71■□□□□ 0.27
SMARCA4-207ENST00000541122 ABCC1P33527 1531 aa16.71■□□□□ 0.26
SMARCA4-207ENST00000541122 PDE4DQ08499 809 aa16.71■□□□□ 0.26
SMARCA4-207ENST00000541122 PHLDB2Q86SQ0 1253 aa16.71■□□□□ 0.26
SMARCA4-207ENST00000541122 SMARCC2Q8TAQ2 1214 aa16.71■□□□□ 0.26
SMARCA4-207ENST00000541122 ZBTB9Q96C00 473 aa16.71■□□□□ 0.26
SMARCA4-207ENST00000541122 SERPINA10Q9UK55 444 aa16.71■□□□□ 0.26
SMARCA4-207ENST00000541122 JARID2Q92833 1246 aaPredicted RBP16.7■□□□□ 0.26
SMARCA4-207ENST00000541122 STX10O60499 249 aa16.7■□□□□ 0.26
SMARCA4-207ENST00000541122 EEF2P13639 858 aaKnown RBP16.7■□□□□ 0.26
SMARCA4-207ENST00000541122 EXOC4Q96A65 974 aa16.7■□□□□ 0.26
SMARCA4-207ENST00000541122 BAIAP2L1Q9UHR4 511 aa16.7■□□□□ 0.26
SMARCA4-207ENST00000541122 FANCAO15360 1455 aa16.7■□□□□ 0.26
SMARCA4-207ENST00000541122 DIS3L2Q8IYB7 885 aaKnown RBP16.7■□□□□ 0.26
SMARCA4-207ENST00000541122 RNF10Q8N5U6 811 aaKnown RBP16.7■□□□□ 0.26
SMARCA4-207ENST00000541122 BCAS4Q8TDM0 211 aa16.7■□□□□ 0.26
SMARCA4-207ENST00000541122 BICC1Q9H694 974 aaKnown RBP16.7■□□□□ 0.26
SMARCA4-207ENST00000541122 HAUS4Q9H6D7 363 aa16.7■□□□□ 0.26
SMARCA4-207ENST00000541122 PARP2Q9UGN5 583 aa16.7■□□□□ 0.26
SMARCA4-207ENST00000541122 DNMT1P26358 1616 aaKnown RBP16.7■□□□□ 0.26
SMARCA4-207ENST00000541122 TRAF5O00463 557 aa16.7■□□□□ 0.26
SMARCA4-207ENST00000541122 CHL1O00533 1208 aa16.7■□□□□ 0.26
SMARCA4-207ENST00000541122 NDC80O14777 642 aa16.7■□□□□ 0.26
SMARCA4-207ENST00000541122 KRT24Q2M2I5 525 aa16.7■□□□□ 0.26
SMARCA4-207ENST00000541122 MAP7D1Q3KQU3 841 aa16.7■□□□□ 0.26
SMARCA4-207ENST00000541122 KIAA0232Q92628 1395 aa16.69■□□□□ 0.26
SMARCA4-207ENST00000541122 FAM13AO94988 1023 aa16.69■□□□□ 0.26
SMARCA4-207ENST00000541122 PLCB3Q01970 1234 aa16.69■□□□□ 0.26
SMARCA4-207ENST00000541122 RAB3IPQ96QF0 476 aaPredicted RBP16.69■□□□□ 0.26
SMARCA4-207ENST00000541122 LUC7L3O95232 432 aaKnown RBP16.69■□□□□ 0.26
SMARCA4-207ENST00000541122 ZNF174Q15697 407 aa16.69■□□□□ 0.26
SMARCA4-207ENST00000541122 PPP2R5EQ16537 467 aa16.69■□□□□ 0.26
SMARCA4-207ENST00000541122 ME3Q16798 604 aa16.69■□□□□ 0.26
SMARCA4-207ENST00000541122 MCUR1Q96AQ8 359 aa16.69■□□□□ 0.26
SMARCA4-207ENST00000541122 BICD1Q96G01 975 aa16.69■□□□□ 0.26
SMARCA4-207ENST00000541122 SYNCQ9H7C4 482 aa16.69■□□□□ 0.26
SMARCA4-207ENST00000541122 NR1I2O75469 434 aa16.69■□□□□ 0.26
SMARCA4-207ENST00000541122 FBLN1P23142 703 aa16.69■□□□□ 0.26
SMARCA4-207ENST00000541122 TNNI3KQ59H18 835 aa16.69■□□□□ 0.26
SMARCA4-207ENST00000541122 RAB17Q9H0T7 212 aa16.69■□□□□ 0.26
SMARCA4-207ENST00000541122 TAB2Q9NYJ8 693 aa16.69■□□□□ 0.26
SMARCA4-207ENST00000541122 FPGT-TNNI3KV9GXZ4 949 aa16.69■□□□□ 0.26
SMARCA4-207ENST00000541122 EPB41P11171 864 aaKnown RBP16.69■□□□□ 0.26
SMARCA4-207ENST00000541122 OR8K1Q8NGG5 319 aa16.69■□□□□ 0.26
SMARCA4-207ENST00000541122 PPP1R12CQ9BZL4 782 aa16.69■□□□□ 0.26
SMARCA4-207ENST00000541122 MYO1AQ9UBC5 1043 aa16.69■□□□□ 0.26
SMARCA4-207ENST00000541122 SBNO2Q9Y2G9 1366 aa16.68■□□□□ 0.26
SMARCA4-207ENST00000541122 SRGAP1Q7Z6B7 1085 aa16.68■□□□□ 0.26
SMARCA4-207ENST00000541122 BANK1Q8NDB2 785 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms