RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 NCAPGQ9BPX3 1015 aa5.99□□□□□ -1.45
PROM1-220ENST00000540805 PA2G4Q9UQ80 394 aaKnown RBP5.99□□□□□ -1.45
PROM1-220ENST00000540805 TAF6LQ9Y6J9 622 aa5.99□□□□□ -1.45
PROM1-220ENST00000540805 LAMB2P55268 1798 aa5.99□□□□□ -1.45
PROM1-220ENST00000540805 EFCAB8A8MWE9 144 aa5.99□□□□□ -1.45
PROM1-220ENST00000540805 ERVV-2B6SEH9 535 aa5.99□□□□□ -1.45
PROM1-220ENST00000540805 TADA3O75528 432 aa5.99□□□□□ -1.45
PROM1-220ENST00000540805 URI1O94763 535 aaPredicted RBP5.99□□□□□ -1.45
PROM1-220ENST00000540805 NAA16Q6N069 864 aaPredicted RBP5.99□□□□□ -1.45
PROM1-220ENST00000540805 Q6ZUG5 572 aa5.99□□□□□ -1.45
PROM1-220ENST00000540805 FAM177A1Q8N128 213 aaPredicted RBP5.99□□□□□ -1.45
PROM1-220ENST00000540805 ENGASEQ8NFI3 743 aa5.99□□□□□ -1.45
PROM1-220ENST00000540805 LINS1Q8NG48 757 aa5.99□□□□□ -1.45
PROM1-220ENST00000540805 RPGRQ92834 1020 aaKnown RBP5.99□□□□□ -1.45
PROM1-220ENST00000540805 NEK1Q96PY6 1258 aa5.99□□□□□ -1.45
PROM1-220ENST00000540805 USP28Q96RU2 1077 aa5.99□□□□□ -1.45
PROM1-220ENST00000540805 FTOQ9C0B1 505 aaKnown RBP eCLIP5.99□□□□□ -1.45
PROM1-220ENST00000540805 ZNF652Q9Y2D9 606 aa5.99□□□□□ -1.45
PROM1-220ENST00000540805 MYH3P11055 1940 aa5.99□□□□□ -1.45
PROM1-220ENST00000540805 F8W031 263 aaPredicted RBP5.99□□□□□ -1.45
PROM1-220ENST00000540805 GUCY2CP25092 1073 aa5.99□□□□□ -1.45
PROM1-220ENST00000540805 ADD1P35611 737 aaKnown RBP5.99□□□□□ -1.45
PROM1-220ENST00000540805 GCKRQ14397 625 aa5.99□□□□□ -1.45
PROM1-220ENST00000540805 DDB1Q16531 1140 aa5.99□□□□□ -1.45
PROM1-220ENST00000540805 WWC2Q6AWC2 1192 aa5.99□□□□□ -1.45
PROM1-220ENST00000540805 CRACR2BQ8N4Y2 399 aaPredicted RBP5.99□□□□□ -1.45
PROM1-220ENST00000540805 XAGE3Q8WTP9 111 aa5.99□□□□□ -1.45
PROM1-220ENST00000540805 MRPS27Q92552 414 aaKnown RBP5.99□□□□□ -1.45
PROM1-220ENST00000540805 CCDC47Q96A33 483 aaKnown RBP5.99□□□□□ -1.45
PROM1-220ENST00000540805 LLPHQ9BRT6 129 aaKnown RBP5.99□□□□□ -1.45
PROM1-220ENST00000540805 CARD6Q9BX69 1037 aa5.99□□□□□ -1.45
PROM1-220ENST00000540805 NACAP1Q9BZK3 213 aa5.99□□□□□ -1.45
PROM1-220ENST00000540805 BICC1Q9H694 974 aaKnown RBP5.99□□□□□ -1.45
PROM1-220ENST00000540805 ARAP2Q8WZ64 1704 aa5.99□□□□□ -1.45
PROM1-220ENST00000540805 THSD7AQ9UPZ6 1657 aa5.98□□□□□ -1.45
PROM1-220ENST00000540805 SLC3A2P08195 630 aaKnown RBP5.98□□□□□ -1.45
PROM1-220ENST00000540805 EVCP57679 992 aa5.98□□□□□ -1.45
PROM1-220ENST00000540805 RBM26Q5T8P6 1007 aaKnown RBP5.98□□□□□ -1.45
PROM1-220ENST00000540805 SRLQ86TD4 932 aa5.98□□□□□ -1.45
PROM1-220ENST00000540805 SMARCC2Q8TAQ2 1214 aa5.98□□□□□ -1.45
PROM1-220ENST00000540805 ZCRB1Q8TBF4 217 aaKnown RBP5.98□□□□□ -1.45
PROM1-220ENST00000540805 RNF217Q8TC41 542 aa5.98□□□□□ -1.45
PROM1-220ENST00000540805 BPIFA3Q9BQP9 254 aa5.98□□□□□ -1.45
PROM1-220ENST00000540805 METTL22Q9BUU2 404 aaPredicted RBP5.98□□□□□ -1.45
PROM1-220ENST00000540805 TFCP2L1Q9NZI6 479 aa5.98□□□□□ -1.45
PROM1-220ENST00000540805 CLGNO14967 610 aa5.98□□□□□ -1.45
PROM1-220ENST00000540805 FANCGO15287 622 aa5.98□□□□□ -1.45
PROM1-220ENST00000540805 SNRPA1P09661 255 aaKnown RBP5.98□□□□□ -1.45
PROM1-220ENST00000540805 FOXO4P98177 505 aa5.98□□□□□ -1.45
PROM1-220ENST00000540805 IFIT5Q13325 482 aaKnown RBP5.98□□□□□ -1.45
PROM1-220ENST00000540805 LDHAL6AQ6ZMR3 332 aa5.98□□□□□ -1.45
PROM1-220ENST00000540805 COPS6Q7L5N1 327 aa5.98□□□□□ -1.45
PROM1-220ENST00000540805 ZNF589Q86UQ0 364 aaPredicted RBP5.98□□□□□ -1.45
PROM1-220ENST00000540805 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.98□□□□□ -1.45
PROM1-220ENST00000540805 CLEC11AQ9Y240 323 aa5.98□□□□□ -1.45
PROM1-220ENST00000540805 LAMA4Q16363 1823 aa5.98□□□□□ -1.45
PROM1-220ENST00000540805 GRM8O00222 908 aa5.98□□□□□ -1.45
PROM1-220ENST00000540805 N4BP1O75113 896 aaKnown RBP5.98□□□□□ -1.45
PROM1-220ENST00000540805 PHACTR2O75167 634 aa5.98□□□□□ -1.45
PROM1-220ENST00000540805 KRT18P05783 430 aaKnown RBP5.98□□□□□ -1.45
PROM1-220ENST00000540805 IL2RBP14784 551 aa5.98□□□□□ -1.45
PROM1-220ENST00000540805 GOLGA8FQ08AF8 430 aa5.98□□□□□ -1.45
PROM1-220ENST00000540805 GOLGA8DPQ0D2H9 430 aa5.98□□□□□ -1.45
PROM1-220ENST00000540805 SCRN1Q12765 414 aa5.98□□□□□ -1.45
PROM1-220ENST00000540805 SMC1AQ14683 1233 aaKnown RBP5.98□□□□□ -1.45
PROM1-220ENST00000540805 CCDC24Q8N4L8 307 aa5.98□□□□□ -1.45
PROM1-220ENST00000540805 SUFUQ9UMX1 484 aa5.98□□□□□ -1.45
PROM1-220ENST00000540805 PTPDC1A2A3K4 754 aa5.97□□□□□ -1.45
PROM1-220ENST00000540805 H3BQF6 201 aa5.97□□□□□ -1.45
PROM1-220ENST00000540805 TAF5LO75529 589 aa5.97□□□□□ -1.45
PROM1-220ENST00000540805 IPO7O95373 1038 aaKnown RBP5.97□□□□□ -1.45
PROM1-220ENST00000540805 TBC1D8O95759 1140 aa5.97□□□□□ -1.45
PROM1-220ENST00000540805 POLR3DP05423 398 aaPredicted RBP5.97□□□□□ -1.45
PROM1-220ENST00000540805 XBP1P17861 261 aa5.97□□□□□ -1.45
PROM1-220ENST00000540805 SCP2P22307 547 aa5.97□□□□□ -1.45
PROM1-220ENST00000540805 NAP1L1P55209 391 aaKnown RBP5.97□□□□□ -1.45
PROM1-220ENST00000540805 DPCR1Q3MIW9 517 aa5.97□□□□□ -1.45
PROM1-220ENST00000540805 CC2D1AQ6P1N0 951 aaPredicted RBP5.97□□□□□ -1.45
PROM1-220ENST00000540805 NBPF5PQ86XG9 351 aaPredicted RBP5.97□□□□□ -1.45
PROM1-220ENST00000540805 NSUN7Q8NE18 718 aaKnown RBP5.97□□□□□ -1.45
PROM1-220ENST00000540805 AIDAQ96BJ3 306 aa5.97□□□□□ -1.45
PROM1-220ENST00000540805 EAF2Q96CJ1 260 aaPredicted RBP5.97□□□□□ -1.45
PROM1-220ENST00000540805 UBXN6Q9BZV1 441 aa5.97□□□□□ -1.45
PROM1-220ENST00000540805 ZSWIM4Q9H7M6 989 aa5.97□□□□□ -1.45
PROM1-220ENST00000540805 SUGCTQ9HAC7 445 aa5.97□□□□□ -1.45
PROM1-220ENST00000540805 TLR7Q9NYK1 1049 aaKnown RBP5.97□□□□□ -1.45
PROM1-220ENST00000540805 KIAA1468Q9P260 1216 aa5.97□□□□□ -1.45
PROM1-220ENST00000540805 CEP83Q9Y592 693 aa5.97□□□□□ -1.45
PROM1-220ENST00000540805 BRWD3Q6RI45 1802 aa5.97□□□□□ -1.45
PROM1-220ENST00000540805 ZSCAN12O43309 604 aa5.97□□□□□ -1.45
PROM1-220ENST00000540805 CBFA2T2O43439 604 aa5.97□□□□□ -1.45
PROM1-220ENST00000540805 PFKFB2O60825 505 aa5.97□□□□□ -1.45
PROM1-220ENST00000540805 IFIT1P09914 478 aaKnown RBP5.97□□□□□ -1.45
PROM1-220ENST00000540805 USPL1Q5W0Q7 1092 aa5.97□□□□□ -1.45
PROM1-220ENST00000540805 DZIP1Q86YF9 867 aaKnown RBP5.97□□□□□ -1.45
PROM1-220ENST00000540805 FMR1NBQ8N0W7 255 aaPredicted RBP5.97□□□□□ -1.45
PROM1-220ENST00000540805 GPR161Q8N6U8 529 aaKnown RBP5.97□□□□□ -1.45
PROM1-220ENST00000540805 PIGBQ92521 554 aa5.97□□□□□ -1.45
PROM1-220ENST00000540805 UBAC1Q9BSL1 405 aa5.97□□□□□ -1.45
PROM1-220ENST00000540805 CXorf56Q9H5V9 222 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 64.4 ms