RNA–Protein interactions for RNA: ENST00000540021.5

MSH6-210, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 3,930 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-210ENST00000540021 CEP112Q8N8E3 955 aa14.76□□□□□ -0.05
MSH6-210ENST00000540021 WDR24Q96S15 920 aa14.76□□□□□ -0.05
MSH6-210ENST00000540021 PLEKHA4Q9H4M7 779 aa14.76□□□□□ -0.05
MSH6-210ENST00000540021 USP31Q70CQ4 1352 aa14.76□□□□□ -0.05
MSH6-210ENST00000540021 MED23Q9ULK4 1368 aa14.76□□□□□ -0.05
MSH6-210ENST00000540021 RBM43Q6ZSC3 357 aaKnown RBP14.75□□□□□ -0.05
MSH6-210ENST00000540021 HDXQ7Z353 690 aa14.75□□□□□ -0.05
MSH6-210ENST00000540021 PUS7LQ9H0K6 701 aaKnown RBP14.75□□□□□ -0.05
MSH6-210ENST00000540021 SOWAHDA6NJG2 315 aa14.75□□□□□ -0.05
MSH6-210ENST00000540021 MARCH6O60337 910 aa14.75□□□□□ -0.05
MSH6-210ENST00000540021 CUTAO60888 179 aa14.75□□□□□ -0.05
MSH6-210ENST00000540021 LONRF2Q1L5Z9 754 aa14.75□□□□□ -0.05
MSH6-210ENST00000540021 CCDC181Q5TID7 509 aa14.75□□□□□ -0.05
MSH6-210ENST00000540021 ENGASEQ8NFI3 743 aa14.75□□□□□ -0.05
MSH6-210ENST00000540021 SLF1Q9BQI6 1058 aa14.75□□□□□ -0.05
MSH6-210ENST00000540021 INCENPQ9NQS7 918 aa14.75□□□□□ -0.05
MSH6-210ENST00000540021 MAP3K12Q12852 859 aa14.75□□□□□ -0.05
MSH6-210ENST00000540021 KCNB2Q92953 911 aa14.75□□□□□ -0.05
MSH6-210ENST00000540021 EEF2KMTQ96G04 330 aa14.75□□□□□ -0.05
MSH6-210ENST00000540021 PLIN2Q99541 437 aa14.75□□□□□ -0.05
MSH6-210ENST00000540021 DIP2CQ9Y2E4 1556 aa14.74□□□□□ -0.05
MSH6-210ENST00000540021 ZNF174Q15697 407 aa14.74□□□□□ -0.05
MSH6-210ENST00000540021 VSTM4Q8IW00 320 aa14.74□□□□□ -0.05
MSH6-210ENST00000540021 PHLPP2Q6ZVD8 1323 aa14.74□□□□□ -0.05
MSH6-210ENST00000540021 DLG5Q8TDM6 1919 aa14.74□□□□□ -0.05
MSH6-210ENST00000540021 CCDC196A0A1B0GTZ2 297 aa14.74□□□□□ -0.05
MSH6-210ENST00000540021 ANKRD18BA2A2Z9 1011 aa14.74□□□□□ -0.05
MSH6-210ENST00000540021 VWA3AA6NCI4 1184 aa14.74□□□□□ -0.05
MSH6-210ENST00000540021 MTF1Q14872 753 aa14.74□□□□□ -0.05
MSH6-210ENST00000540021 ENOX2Q16206 610 aaKnown RBP14.74□□□□□ -0.05
MSH6-210ENST00000540021 NBPF11Q86T75 865 aa14.74□□□□□ -0.05
MSH6-210ENST00000540021 MAGEB6Q8N7X4 407 aa14.74□□□□□ -0.05
MSH6-210ENST00000540021 CTNND2Q9UQB3 1225 aa14.74□□□□□ -0.05
MSH6-210ENST00000540021 TRIM75PA6NK02 468 aa14.73□□□□□ -0.05
MSH6-210ENST00000540021 CASP1P29466 404 aa14.73□□□□□ -0.05
MSH6-210ENST00000540021 TSGA10IPQ3SY00 556 aa14.73□□□□□ -0.05
MSH6-210ENST00000540021 KLHL34Q8N239 644 aa14.73□□□□□ -0.05
MSH6-210ENST00000540021 CCDC47Q96A33 483 aaKnown RBP14.73□□□□□ -0.05
MSH6-210ENST00000540021 FDPSP14324 419 aaKnown RBP14.73□□□□□ -0.05
MSH6-210ENST00000540021 SETQ01105 290 aaPredicted RBP14.73□□□□□ -0.05
MSH6-210ENST00000540021 BLZF1Q9H2G9 400 aa14.73□□□□□ -0.05
MSH6-210ENST00000540021 POTEB2H3BUK9 544 aa14.73□□□□□ -0.05
MSH6-210ENST00000540021 IKBKBO14920 756 aa14.73□□□□□ -0.05
MSH6-210ENST00000540021 MBD4O95243 580 aa14.73□□□□□ -0.05
MSH6-210ENST00000540021 KANK3Q6NY19 840 aa14.73□□□□□ -0.05
MSH6-210ENST00000540021 GPATCH11Q8N954 259 aa14.73□□□□□ -0.05
MSH6-210ENST00000540021 TAB2Q9NYJ8 693 aa14.73□□□□□ -0.05
MSH6-210ENST00000540021 SLC4A4Q9Y6R1 1079 aa14.73□□□□□ -0.05
MSH6-210ENST00000540021 USPL1Q5W0Q7 1092 aa14.73□□□□□ -0.05
MSH6-210ENST00000540021 ARMT1Q9H993 441 aa14.73□□□□□ -0.05
MSH6-210ENST00000540021 MYO5BQ9ULV0 1848 aa14.72□□□□□ -0.05
MSH6-210ENST00000540021 RAD51AP2Q09MP3 1159 aa14.72□□□□□ -0.05
MSH6-210ENST00000540021 CC2D1AQ6P1N0 951 aaPredicted RBP14.72□□□□□ -0.05
MSH6-210ENST00000540021 MLKLQ8NB16 471 aa14.72□□□□□ -0.05
MSH6-210ENST00000540021 RGS22Q8NE09 1264 aa14.72□□□□□ -0.05
MSH6-210ENST00000540021 ZNF446Q9NWS9 450 aa14.72□□□□□ -0.05
MSH6-210ENST00000540021 SH3TC1Q8TE82 1336 aa14.72□□□□□ -0.05
MSH6-210ENST00000540021 NLRP5P59047 1200 aa14.72□□□□□ -0.05
MSH6-210ENST00000540021 UBXN1Q04323 297 aa14.72□□□□□ -0.05
MSH6-210ENST00000540021 AXIN2Q9Y2T1 843 aa14.72□□□□□ -0.05
MSH6-210ENST00000540021 TMEM131LA2VDJ0 1609 aa14.72□□□□□ -0.05
MSH6-210ENST00000540021 SYNRGQ9UMZ2 1314 aa14.72□□□□□ -0.05
MSH6-210ENST00000540021 NR5A1Q13285 461 aa14.72□□□□□ -0.05
MSH6-210ENST00000540021 CDC5LQ99459 802 aaKnown RBP14.72□□□□□ -0.05
MSH6-210ENST00000540021 TANGO6Q9C0B7 1094 aa14.72□□□□□ -0.05
MSH6-210ENST00000540021 ZNF532Q9HCE3 1301 aa14.71□□□□□ -0.05
MSH6-210ENST00000540021 PRDM1O75626 825 aa14.71□□□□□ -0.05
MSH6-210ENST00000540021 STIM1Q13586 685 aa14.71□□□□□ -0.05
MSH6-210ENST00000540021 ALDH8A1Q9H2A2 487 aaPredicted RBP14.71□□□□□ -0.05
MSH6-210ENST00000540021 STX10O60499 249 aa14.71□□□□□ -0.05
MSH6-210ENST00000540021 TADA3O75528 432 aa14.71□□□□□ -0.05
MSH6-210ENST00000540021 ZMYND10O75800 440 aa14.71□□□□□ -0.05
MSH6-210ENST00000540021 TRIM21P19474 475 aaKnown RBP14.71□□□□□ -0.05
MSH6-210ENST00000540021 PLA2G4AP47712 749 aa14.71□□□□□ -0.05
MSH6-210ENST00000540021 EXOSC10Q01780 885 aaKnown RBP14.71□□□□□ -0.05
MSH6-210ENST00000540021 MICALL1Q8N3F8 863 aa14.71□□□□□ -0.05
MSH6-210ENST00000540021 DCAF5Q96JK2 942 aa14.71□□□□□ -0.05
MSH6-210ENST00000540021 NAPGQ99747 312 aaPredicted RBP14.71□□□□□ -0.05
MSH6-210ENST00000540021 FAM107BQ9H098 131 aa14.71□□□□□ -0.05
MSH6-210ENST00000540021 FAN1Q9Y2M0 1017 aa14.71□□□□□ -0.05
MSH6-210ENST00000540021 SIGLEC1Q9BZZ2 1709 aa14.71□□□□□ -0.06
MSH6-210ENST00000540021 ENC1O14682 589 aa14.71□□□□□ -0.06
MSH6-210ENST00000540021 RAD21O60216 631 aa14.71□□□□□ -0.06
MSH6-210ENST00000540021 IVLP07476 585 aa14.71□□□□□ -0.06
MSH6-210ENST00000540021 CASP14P31944 242 aa14.71□□□□□ -0.06
MSH6-210ENST00000540021 KRT9P35527 623 aa14.71□□□□□ -0.06
MSH6-210ENST00000540021 GTF2A1P52655 376 aaPredicted RBP14.71□□□□□ -0.06
MSH6-210ENST00000540021 MAP9Q49MG5 647 aa14.71□□□□□ -0.06
MSH6-210ENST00000540021 APOA5Q6Q788 366 aa14.71□□□□□ -0.06
MSH6-210ENST00000540021 NOSTRINQ8IVI9 506 aa14.71□□□□□ -0.06
MSH6-210ENST00000540021 SLC35F6Q8N357 371 aa14.71□□□□□ -0.06
MSH6-210ENST00000540021 ACRBPQ8NEB7 543 aa14.71□□□□□ -0.06
MSH6-210ENST00000540021 PSMB7Q99436 277 aa14.71□□□□□ -0.06
MSH6-210ENST00000540021 VPS54Q9P1Q0 977 aa14.71□□□□□ -0.06
MSH6-210ENST00000540021 ADAM21Q9UKJ8 722 aa14.71□□□□□ -0.06
MSH6-210ENST00000540021 FHOD1Q9Y613 1164 aa14.71□□□□□ -0.06
MSH6-210ENST00000540021 TTF1Q15361 905 aaPredicted RBP14.7□□□□□ -0.06
MSH6-210ENST00000540021 SHC4Q6S5L8 630 aa14.7□□□□□ -0.06
MSH6-210ENST00000540021 RABGGTAQ92696 567 aa14.7□□□□□ -0.06
MSH6-210ENST00000540021 TRIM47Q96LD4 638 aa14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms