RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 PHF20L1A8MW92 1017 aa17.47■□□□□ 0.39
SMARCA4-206ENST00000538456 ADCY3O60266 1144 aa17.47■□□□□ 0.39
SMARCA4-206ENST00000538456 PHKA1P46020 1223 aa17.47■□□□□ 0.39
SMARCA4-206ENST00000538456 RGS3P49796 1198 aa17.47■□□□□ 0.39
SMARCA4-206ENST00000538456 PRRT2Q7Z6L0 340 aaPredicted RBP17.47■□□□□ 0.39
SMARCA4-206ENST00000538456 ZSCAN29Q8IWY8 852 aaPredicted RBP17.47■□□□□ 0.39
SMARCA4-206ENST00000538456 NR2E3Q9Y5X4 410 aa17.47■□□□□ 0.39
SMARCA4-206ENST00000538456 SLURP2P0DP57 97 aa17.46■□□□□ 0.39
SMARCA4-206ENST00000538456 PTPRAP18433 802 aa17.46■□□□□ 0.39
SMARCA4-206ENST00000538456 FLT3LGP49771 235 aa17.46■□□□□ 0.39
SMARCA4-206ENST00000538456 FASTKD5Q7L8L6 764 aaKnown RBP17.46■□□□□ 0.39
SMARCA4-206ENST00000538456 SMCR8Q8TEV9 937 aaPredicted RBP17.46■□□□□ 0.39
SMARCA4-206ENST00000538456 CEP126Q9P2H0 1117 aa17.46■□□□□ 0.39
SMARCA4-206ENST00000538456 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.46■□□□□ 0.39
SMARCA4-206ENST00000538456 TAOK2Q9UL54 1235 aa17.46■□□□□ 0.39
SMARCA4-206ENST00000538456 DOCK3Q8IZD9 2030 aa17.46■□□□□ 0.39
SMARCA4-206ENST00000538456 ZNF521Q96K83 1311 aa17.46■□□□□ 0.38
SMARCA4-206ENST00000538456 SALL1Q9NSC2 1324 aa17.46■□□□□ 0.38
SMARCA4-206ENST00000538456 TRIM75PA6NK02 468 aa17.45■□□□□ 0.38
SMARCA4-206ENST00000538456 TNPO2O14787 897 aaKnown RBP17.45■□□□□ 0.38
SMARCA4-206ENST00000538456 INHAP05111 366 aa17.45■□□□□ 0.38
SMARCA4-206ENST00000538456 SH3BP5LQ7L8J4 393 aa17.45■□□□□ 0.38
SMARCA4-206ENST00000538456 DENND2AQ9ULE3 1009 aa17.45■□□□□ 0.38
SMARCA4-206ENST00000538456 AFG3L2Q9Y4W6 797 aa17.45■□□□□ 0.38
SMARCA4-206ENST00000538456 LRRFIP2Q9Y608 721 aaKnown RBP17.45■□□□□ 0.38
SMARCA4-206ENST00000538456 RFX7Q2KHR2 1363 aa17.44■□□□□ 0.38
SMARCA4-206ENST00000538456 ZBTB7BO15156 539 aaPredicted RBP17.44■□□□□ 0.38
SMARCA4-206ENST00000538456 SGPL1O95470 568 aa17.44■□□□□ 0.38
SMARCA4-206ENST00000538456 PICALMQ13492 652 aa17.44■□□□□ 0.38
SMARCA4-206ENST00000538456 CCDC84Q86UT8 332 aaPredicted RBP17.44■□□□□ 0.38
SMARCA4-206ENST00000538456 DZIP1Q86YF9 867 aaKnown RBP17.44■□□□□ 0.38
SMARCA4-206ENST00000538456 IDI2Q9BXS1 227 aa17.44■□□□□ 0.38
SMARCA4-206ENST00000538456 PRO3102Q9H379 93 aa17.44■□□□□ 0.38
SMARCA4-206ENST00000538456 ALPK3Q96L96 1907 aa17.43■□□□□ 0.38
SMARCA4-206ENST00000538456 DDTLA6NHG4 134 aaPredicted RBP17.43■□□□□ 0.38
SMARCA4-206ENST00000538456 SEMA3EO15041 775 aa17.43■□□□□ 0.38
SMARCA4-206ENST00000538456 EVI5O60447 810 aa17.43■□□□□ 0.38
SMARCA4-206ENST00000538456 ENTPD3O75355 529 aa17.43■□□□□ 0.38
SMARCA4-206ENST00000538456 CIAO1O76071 339 aa17.43■□□□□ 0.38
SMARCA4-206ENST00000538456 TFRCP02786 760 aaKnown RBP17.43■□□□□ 0.38
SMARCA4-206ENST00000538456 UBTFL1P0CB47 393 aaPredicted RBP17.43■□□□□ 0.38
SMARCA4-206ENST00000538456 ADORA1P30542 326 aa17.43■□□□□ 0.38
SMARCA4-206ENST00000538456 DEFB118Q96PH6 123 aa17.43■□□□□ 0.38
SMARCA4-206ENST00000538456 ABCF2Q9UG63 623 aa17.43■□□□□ 0.38
SMARCA4-206ENST00000538456 GAKO14976 1311 aa17.43■□□□□ 0.38
SMARCA4-206ENST00000538456 COL6A3P12111 3177 aa17.42■□□□□ 0.38
SMARCA4-206ENST00000538456 CCDC102BQ68D86 513 aa17.42■□□□□ 0.38
SMARCA4-206ENST00000538456 ANKRD13CQ8N6S4 541 aa17.42■□□□□ 0.38
SMARCA4-206ENST00000538456 DDX4Q9NQI0 724 aaKnown RBP17.42■□□□□ 0.38
SMARCA4-206ENST00000538456 PA2G4Q9UQ80 394 aaKnown RBP17.42■□□□□ 0.38
SMARCA4-206ENST00000538456 SLC45A1Q9Y2W3 748 aa17.42■□□□□ 0.38
SMARCA4-206ENST00000538456 CTNND1O60716 968 aaKnown RBP17.41■□□□□ 0.38
SMARCA4-206ENST00000538456 BTDP43251 543 aa17.41■□□□□ 0.38
SMARCA4-206ENST00000538456 RASGRF1Q13972 1273 aa17.41■□□□□ 0.38
SMARCA4-206ENST00000538456 ZGPATQ8N5A5 531 aaKnown RBP17.41■□□□□ 0.38
SMARCA4-206ENST00000538456 PXYLP1Q8TE99 480 aa17.41■□□□□ 0.38
SMARCA4-206ENST00000538456 SMC4Q9NTJ3 1288 aa17.41■□□□□ 0.38
SMARCA4-206ENST00000538456 FBXO3Q9UK99 471 aa17.41■□□□□ 0.38
SMARCA4-206ENST00000538456 ATAD5Q96QE3 1844 aa17.41■□□□□ 0.38
SMARCA4-206ENST00000538456 FAM196BA6NMK8 535 aa17.4■□□□□ 0.38
SMARCA4-206ENST00000538456 E9PSI1 815 aa17.4■□□□□ 0.38
SMARCA4-206ENST00000538456 IL15P40933 162 aaPredicted RBP17.4■□□□□ 0.38
SMARCA4-206ENST00000538456 IRF5Q13568 498 aa17.4■□□□□ 0.38
SMARCA4-206ENST00000538456 TREML2Q5T2D2 321 aa17.4■□□□□ 0.38
SMARCA4-206ENST00000538456 AGTPBP1Q9UPW5 1226 aa17.4■□□□□ 0.38
SMARCA4-206ENST00000538456 LOC285556D6RIA3 1793 aa17.4■□□□□ 0.38
SMARCA4-206ENST00000538456 SOX1O00570 391 aaPredicted RBP17.39■□□□□ 0.37
SMARCA4-206ENST00000538456 SLF2Q8IX21 1173 aa17.39■□□□□ 0.37
SMARCA4-206ENST00000538456 COA7Q96BR5 231 aa17.39■□□□□ 0.37
SMARCA4-206ENST00000538456 PAK6Q9NQU5 681 aaPredicted RBP17.39■□□□□ 0.37
SMARCA4-206ENST00000538456 STAP2Q9UGK3 403 aa17.39■□□□□ 0.37
SMARCA4-206ENST00000538456 MAP3K10Q02779 954 aa17.38■□□□□ 0.37
SMARCA4-206ENST00000538456 DIS3LQ8TF46 1054 aaKnown RBP17.38■□□□□ 0.37
SMARCA4-206ENST00000538456 LRCH3Q96II8 777 aa17.38■□□□□ 0.37
SMARCA4-206ENST00000538456 PAWRQ96IZ0 340 aaKnown RBP17.38■□□□□ 0.37
SMARCA4-206ENST00000538456 MROH7-TTC4A0A0A0MT08 1334 aa17.38■□□□□ 0.37
SMARCA4-206ENST00000538456 TIMM10P62072 90 aa17.37■□□□□ 0.37
SMARCA4-206ENST00000538456 MECOMQ03112 1051 aa17.37■□□□□ 0.37
SMARCA4-206ENST00000538456 FAM110CQ1W6H9 321 aa17.37■□□□□ 0.37
SMARCA4-206ENST00000538456 ALDH1L2Q3SY69 923 aa17.37■□□□□ 0.37
SMARCA4-206ENST00000538456 SLC17A8Q8NDX2 589 aa17.37■□□□□ 0.37
SMARCA4-206ENST00000538456 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.37■□□□□ 0.37
SMARCA4-206ENST00000538456 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.37■□□□□ 0.37
SMARCA4-206ENST00000538456 PNMA3Q9UL41 463 aa17.37■□□□□ 0.37
SMARCA4-206ENST00000538456 A0A1W2PPC1 479 aa17.36■□□□□ 0.37
SMARCA4-206ENST00000538456 SPTY2D1Q68D10 685 aaPredicted RBP17.36■□□□□ 0.37
SMARCA4-206ENST00000538456 FAM163AQ96GL9 167 aaPredicted RBP17.36■□□□□ 0.37
SMARCA4-206ENST00000538456 CRISPLD2Q9H0B8 497 aa17.36■□□□□ 0.37
SMARCA4-206ENST00000538456 A0A1B0GUL7 405 aa17.35■□□□□ 0.37
SMARCA4-206ENST00000538456 HMGCS2P54868 508 aa17.35■□□□□ 0.37
SMARCA4-206ENST00000538456 RHBDL3P58872 404 aa17.35■□□□□ 0.37
SMARCA4-206ENST00000538456 SLFN5Q08AF3 891 aa17.35■□□□□ 0.37
SMARCA4-206ENST00000538456 SPP2Q13103 211 aa17.35■□□□□ 0.37
SMARCA4-206ENST00000538456 ERICH6Q7L0X2 663 aa17.35■□□□□ 0.37
SMARCA4-206ENST00000538456 NECAB2Q7Z6G3 386 aa17.35■□□□□ 0.37
SMARCA4-206ENST00000538456 C7orf61Q8IZ16 206 aa17.35■□□□□ 0.37
SMARCA4-206ENST00000538456 PROCA1Q8NCQ7 364 aaPredicted RBP17.35■□□□□ 0.37
SMARCA4-206ENST00000538456 ZNF384Q8TF68 577 aa17.35■□□□□ 0.37
SMARCA4-206ENST00000538456 XAGE2Q96GT9 111 aa17.35■□□□□ 0.37
SMARCA4-206ENST00000538456 COPRSQ9NQ92 184 aa17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms