RNA–Protein interactions for RNA: ENST00000535916.5

VBP1-203, Transcript of VHL binding protein 1, humanhuman

TSL 2 BASIC

Gene VBP1, Length 944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-203ENST00000535916 WFDC3Q8IUB2 231 aa9.07□□□□□ -0.96
VBP1-203ENST00000535916 FAM181AQ8N9Y4 354 aa9.07□□□□□ -0.96
VBP1-203ENST00000535916 SLC5A6Q9Y289 635 aa9.07□□□□□ -0.96
VBP1-203ENST00000535916 BRD1O95696 1058 aa9.06□□□□□ -0.96
VBP1-203ENST00000535916 NEFMP07197 916 aa9.06□□□□□ -0.96
VBP1-203ENST00000535916 ARNTP27540 789 aa9.06□□□□□ -0.96
VBP1-203ENST00000535916 MAP1SQ66K74 1059 aaPredicted RBP9.06□□□□□ -0.96
VBP1-203ENST00000535916 U3KQE9 123 aa9.06□□□□□ -0.96
VBP1-203ENST00000535916 LEFTY1O75610 366 aa9.05□□□□□ -0.96
VBP1-203ENST00000535916 ITGB5P18084 799 aa9.05□□□□□ -0.96
VBP1-203ENST00000535916 NME2P22392 152 aa9.05□□□□□ -0.96
VBP1-203ENST00000535916 SPRED2Q7Z698 418 aa9.05□□□□□ -0.96
VBP1-203ENST00000535916 PLD6Q8N2A8 252 aaKnown RBP9.05□□□□□ -0.96
VBP1-203ENST00000535916 C3orf58Q8NDZ4 430 aa9.05□□□□□ -0.96
VBP1-203ENST00000535916 BNIP3Q12983 259 aa9.04□□□□□ -0.96
VBP1-203ENST00000535916 ZC3H12AQ5D1E8 599 aaKnown RBP9.04□□□□□ -0.96
VBP1-203ENST00000535916 ERICH6Q7L0X2 663 aa9.04□□□□□ -0.96
VBP1-203ENST00000535916 GPBAR1Q8TDU6 330 aa9.04□□□□□ -0.96
VBP1-203ENST00000535916 ISL2Q96A47 359 aa9.04□□□□□ -0.96
VBP1-203ENST00000535916 PCOLCE2Q9UKZ9 415 aa9.04□□□□□ -0.96
VBP1-203ENST00000535916 ZNF252P-AS1Q0IIN9 211 aa9.03□□□□□ -0.96
VBP1-203ENST00000535916 MPRIPQ6WCQ1 1025 aa9.03□□□□□ -0.96
VBP1-203ENST00000535916 STK11IPQ8N1F8 1099 aa9.03□□□□□ -0.96
VBP1-203ENST00000535916 SETDB2Q96T68 719 aa9.03□□□□□ -0.96
VBP1-203ENST00000535916 CBX8Q9HC52 389 aa9.03□□□□□ -0.96
VBP1-203ENST00000535916 PLCL1Q15111 1095 aa9.02□□□□□ -0.97
VBP1-203ENST00000535916 TPTE2Q6XPS3 522 aa9.02□□□□□ -0.97
VBP1-203ENST00000535916 NETO1Q8TDF5 533 aa9.02□□□□□ -0.97
VBP1-203ENST00000535916 NECAB3Q96P71 396 aaPredicted RBP9.02□□□□□ -0.97
VBP1-203ENST00000535916 DUSP23Q9BVJ7 150 aa9.02□□□□□ -0.97
VBP1-203ENST00000535916 EMILIN2Q9BXX0 1053 aa9.02□□□□□ -0.97
VBP1-203ENST00000535916 SSU72Q9NP77 194 aaKnown RBP9.02□□□□□ -0.97
VBP1-203ENST00000535916 MAPK8P45983 427 aa9.01□□□□□ -0.97
VBP1-203ENST00000535916 ERVK-24P63145 666 aa9.01□□□□□ -0.97
VBP1-203ENST00000535916 RNF214Q8ND24 703 aa9.01□□□□□ -0.97
VBP1-203ENST00000535916 MISP3Q96FF7 219 aa9.01□□□□□ -0.97
VBP1-203ENST00000535916 ACSBG1Q96GR2 724 aa9.01□□□□□ -0.97
VBP1-203ENST00000535916 ENC1O14682 589 aa9□□□□□ -0.97
VBP1-203ENST00000535916 FBXO24O75426 580 aa9□□□□□ -0.97
VBP1-203ENST00000535916 PAGE1O75459 146 aa9□□□□□ -0.97
VBP1-203ENST00000535916 JUNBP17275 347 aaPredicted RBP9□□□□□ -0.97
VBP1-203ENST00000535916 ZNF792Q3KQV3 632 aa9□□□□□ -0.97
VBP1-203ENST00000535916 OGFOD2Q6N063 350 aa9□□□□□ -0.97
VBP1-203ENST00000535916 PHF6Q8IWS0 365 aaKnown RBP eCLIP9□□□□□ -0.97
VBP1-203ENST00000535916 TOP6BLQ8N6T0 577 aa9□□□□□ -0.97
VBP1-203ENST00000535916 GRIN3AQ8TCU5 1115 aa9□□□□□ -0.97
VBP1-203ENST00000535916 ASIC4Q96FT7 647 aa9□□□□□ -0.97
VBP1-203ENST00000535916 CACNA2D2Q9NY47 1150 aa9□□□□□ -0.97
VBP1-203ENST00000535916 CD8BP10966 210 aa8.99□□□□□ -0.97
VBP1-203ENST00000535916 BMP6P22004 513 aa8.99□□□□□ -0.97
VBP1-203ENST00000535916 GSTT1P30711 240 aa8.99□□□□□ -0.97
VBP1-203ENST00000535916 CD96P40200 585 aa8.99□□□□□ -0.97
VBP1-203ENST00000535916 FMR1Q06787 632 aaKnown RBP eCLIP8.99□□□□□ -0.97
VBP1-203ENST00000535916 OSBPL7Q9BZF2 842 aa8.99□□□□□ -0.97
VBP1-203ENST00000535916 CSADQ9Y600 493 aa8.99□□□□□ -0.97
VBP1-203ENST00000535916 PAPLNO95428 1278 aa8.98□□□□□ -0.97
VBP1-203ENST00000535916 OXCT1P55809 520 aa8.98□□□□□ -0.97
VBP1-203ENST00000535916 PPM1JQ5JR12 505 aa8.98□□□□□ -0.97
VBP1-203ENST00000535916 FBF1Q8TES7 1133 aa8.98□□□□□ -0.97
VBP1-203ENST00000535916 WWC3Q9ULE0 1092 aa8.98□□□□□ -0.97
VBP1-203ENST00000535916 CEACAM5P06731 702 aa8.97□□□□□ -0.97
VBP1-203ENST00000535916 NTF4P34130 210 aa8.97□□□□□ -0.97
VBP1-203ENST00000535916 PRKCQQ04759 706 aa8.97□□□□□ -0.97
VBP1-203ENST00000535916 RASIP1Q5U651 963 aa8.97□□□□□ -0.97
VBP1-203ENST00000535916 ARHGAP27Q6ZUM4 889 aa8.97□□□□□ -0.97
VBP1-203ENST00000535916 UBE3DQ7Z6J8 389 aa8.97□□□□□ -0.97
VBP1-203ENST00000535916 SRCIN1Q9C0H9 1055 aa8.97□□□□□ -0.97
VBP1-203ENST00000535916 TIMELESSQ9UNS1 1208 aa8.97□□□□□ -0.97
VBP1-203ENST00000535916 PLAGL2Q9UPG8 496 aa8.97□□□□□ -0.97
VBP1-203ENST00000535916 IVNS1ABPQ9Y6Y0 642 aa8.97□□□□□ -0.97
VBP1-203ENST00000535916 DCDC2CA8MYV0 355 aa8.96□□□□□ -0.98
VBP1-203ENST00000535916 ITIH2P19823 946 aa8.96□□□□□ -0.98
VBP1-203ENST00000535916 FUT4P22083 530 aa8.96□□□□□ -0.98
VBP1-203ENST00000535916 IFI16Q16666 785 aaKnown RBP8.96□□□□□ -0.98
VBP1-203ENST00000535916 ZSCAN29Q8IWY8 852 aaPredicted RBP8.96□□□□□ -0.98
VBP1-203ENST00000535916 CEP44Q9C0F1 390 aa8.96□□□□□ -0.98
VBP1-203ENST00000535916 MKNK2Q9HBH9 465 aa8.96□□□□□ -0.98
VBP1-203ENST00000535916 VAV3Q9UKW4 847 aa8.96□□□□□ -0.98
VBP1-203ENST00000535916 PPM1HQ9ULR3 514 aa8.96□□□□□ -0.98
VBP1-203ENST00000535916 TRIM37O94972 964 aa8.95□□□□□ -0.98
VBP1-203ENST00000535916 AOC3Q16853 763 aa8.95□□□□□ -0.98
VBP1-203ENST00000535916 C12orf40Q86WS4 652 aa8.95□□□□□ -0.98
VBP1-203ENST00000535916 HRASLS5Q96KN8 279 aa8.95□□□□□ -0.98
VBP1-203ENST00000535916 HEXIM2Q96MH2 286 aaKnown RBP8.95□□□□□ -0.98
VBP1-203ENST00000535916 ASB16Q96NS5 453 aa8.95□□□□□ -0.98
VBP1-203ENST00000535916 ADAMTS6Q9UKP5 1117 aa8.95□□□□□ -0.98
VBP1-203ENST00000535916 SAMM50Q9Y512 469 aa8.95□□□□□ -0.98
VBP1-203ENST00000535916 RNASE1P07998 156 aaKnown RBP8.94□□□□□ -0.98
VBP1-203ENST00000535916 ALG1LQ6GMV1 187 aa8.94□□□□□ -0.98
VBP1-203ENST00000535916 LLGL2Q6P1M3 1020 aa8.94□□□□□ -0.98
VBP1-203ENST00000535916 RC3H2Q9HBD1 1191 aaKnown RBP8.94□□□□□ -0.98
VBP1-203ENST00000535916 PICK1Q9NRD5 415 aa8.94□□□□□ -0.98
VBP1-203ENST00000535916 MBNL3Q9NUK0 354 aaKnown RBP8.94□□□□□ -0.98
VBP1-203ENST00000535916 CELA3AP09093 270 aa8.93□□□□□ -0.98
VBP1-203ENST00000535916 RING1Q06587 406 aa8.93□□□□□ -0.98
VBP1-203ENST00000535916 FAM214BQ7L5A3 538 aa8.93□□□□□ -0.98
VBP1-203ENST00000535916 KRTAP4-11Q9BYQ6 195 aa8.93□□□□□ -0.98
VBP1-203ENST00000535916 PRDM10Q9NQV6 1147 aa8.93□□□□□ -0.98
VBP1-203ENST00000535916 TMEM265A0A087WTH1 108 aa8.92□□□□□ -0.98
VBP1-203ENST00000535916 ZBTB37Q5TC79 503 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms