RNA–Protein interactions for RNA: ENST00000531041.1

SF3B2-211, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 1 (best)

Gene SF3B2, Length 1,440 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-211ENST00000531041 DEFB129Q9H1M3 183 aa20.31■□□□□ 0.84
SF3B2-211ENST00000531041 ATP8A2Q9NTI2 1148 aa20.31■□□□□ 0.84
SF3B2-211ENST00000531041 MKRN1Q9UHC7 482 aaKnown RBP20.31■□□□□ 0.84
SF3B2-211ENST00000531041 PPP2R3BQ9Y5P8 575 aa20.31■□□□□ 0.84
SF3B2-211ENST00000531041 SLC4A4Q9Y6R1 1079 aa20.31■□□□□ 0.84
SF3B2-211ENST00000531041 CCDC171Q6TFL3 1326 aa20.31■□□□□ 0.84
SF3B2-211ENST00000531041 SIPA1L1O43166 1804 aa20.3■□□□□ 0.84
SF3B2-211ENST00000531041 COL2A1P02458 1487 aaPredicted RBP20.3■□□□□ 0.84
SF3B2-211ENST00000531041 RPAP1Q9BWH6 1393 aaPredicted RBP20.3■□□□□ 0.84
SF3B2-211ENST00000531041 FLT1P17948 1338 aa20.3■□□□□ 0.84
SF3B2-211ENST00000531041 PRKAB2O43741 272 aa20.3■□□□□ 0.84
SF3B2-211ENST00000531041 TCP10Q12799 353 aa20.3■□□□□ 0.84
SF3B2-211ENST00000531041 PICALMQ13492 652 aa20.3■□□□□ 0.84
SF3B2-211ENST00000531041 SDR42E1Q8WUS8 393 aa20.3■□□□□ 0.84
SF3B2-211ENST00000531041 SCAF8Q9UPN6 1271 aaKnown RBP20.3■□□□□ 0.84
SF3B2-211ENST00000531041 MYH8P13535 1937 aa20.3■□□□□ 0.84
SF3B2-211ENST00000531041 PATL2C9JE40 543 aaKnown RBP20.29■□□□□ 0.84
SF3B2-211ENST00000531041 SGSM2O43147 1006 aa20.29■□□□□ 0.84
SF3B2-211ENST00000531041 GIMAP6Q6P9H5 292 aa20.29■□□□□ 0.84
SF3B2-211ENST00000531041 RBM46Q8TBY0 533 aaKnown RBP20.29■□□□□ 0.84
SF3B2-211ENST00000531041 OSBPL5Q9H0X9 879 aaPredicted RBP20.29■□□□□ 0.84
SF3B2-211ENST00000531041 IL25Q9H293 177 aa20.29■□□□□ 0.84
SF3B2-211ENST00000531041 DCP1AQ9NPI6 582 aaPredicted RBP20.29■□□□□ 0.84
SF3B2-211ENST00000531041 ATRNL1Q5VV63 1379 aa20.29■□□□□ 0.84
SF3B2-211ENST00000531041 LAMA4Q16363 1823 aa20.28■□□□□ 0.84
SF3B2-211ENST00000531041 GSG1L2A8MUP6 293 aa20.28■□□□□ 0.84
SF3B2-211ENST00000531041 USP48Q86UV5 1035 aa20.28■□□□□ 0.84
SF3B2-211ENST00000531041 MAPKAPK5Q8IW41 473 aa20.28■□□□□ 0.84
SF3B2-211ENST00000531041 ZFPM1Q8IX07 1006 aa20.28■□□□□ 0.84
SF3B2-211ENST00000531041 SMC1BQ8NDV3 1235 aa20.28■□□□□ 0.84
SF3B2-211ENST00000531041 ESYT1Q9BSJ8 1104 aa20.28■□□□□ 0.84
SF3B2-211ENST00000531041 GLIS2Q9BZE0 524 aaPredicted RBP20.28■□□□□ 0.84
SF3B2-211ENST00000531041 ADM5C9JUS6 153 aa20.27■□□□□ 0.84
SF3B2-211ENST00000531041 DDRGK1Q96HY6 314 aa20.27■□□□□ 0.84
SF3B2-211ENST00000531041 TEPSINQ96N21 525 aa20.27■□□□□ 0.84
SF3B2-211ENST00000531041 TMEM39BQ9GZU3 492 aa20.27■□□□□ 0.84
SF3B2-211ENST00000531041 FOXP2O15409 715 aa20.27■□□□□ 0.83
SF3B2-211ENST00000531041 ITGBL1O95965 494 aaPredicted RBP20.27■□□□□ 0.83
SF3B2-211ENST00000531041 HSPD1P10809 573 aaKnown RBP20.27■□□□□ 0.83
SF3B2-211ENST00000531041 VPS53Q5VIR6 699 aa20.27■□□□□ 0.83
SF3B2-211ENST00000531041 DHX36Q9H2U1 1008 aaKnown RBP20.27■□□□□ 0.83
SF3B2-211ENST00000531041 SH3BP5LQ7L8J4 393 aa20.26■□□□□ 0.83
SF3B2-211ENST00000531041 IFNL3Q8IZI9 196 aa20.26■□□□□ 0.83
SF3B2-211ENST00000531041 NACAP1Q9BZK3 213 aa20.26■□□□□ 0.83
SF3B2-211ENST00000531041 APPP05067 770 aa20.25■□□□□ 0.83
SF3B2-211ENST00000531041 FSTL1Q12841 308 aa20.25■□□□□ 0.83
SF3B2-211ENST00000531041 ALX1Q15699 326 aa20.25■□□□□ 0.83
SF3B2-211ENST00000531041 ZSCAN29Q8IWY8 852 aaPredicted RBP20.25■□□□□ 0.83
SF3B2-211ENST00000531041 DSCC1Q9BVC3 393 aa20.25■□□□□ 0.83
SF3B2-211ENST00000531041 EPB41L4AQ9HCS5 686 aaPredicted RBP20.25■□□□□ 0.83
SF3B2-211ENST00000531041 MCM9Q9NXL9 1143 aa20.25■□□□□ 0.83
SF3B2-211ENST00000531041 DDTLA6NHG4 134 aaPredicted RBP20.24■□□□□ 0.83
SF3B2-211ENST00000531041 PRAMEF18Q5VWM3 479 aa20.24■□□□□ 0.83
SF3B2-211ENST00000531041 CDCA5Q96FF9 252 aa20.24■□□□□ 0.83
SF3B2-211ENST00000531041 SAP30BPQ9UHR5 308 aaKnown RBP20.24■□□□□ 0.83
SF3B2-211ENST00000531041 PALD1Q9ULE6 856 aa20.24■□□□□ 0.83
SF3B2-211ENST00000531041 ZMYM6O95789 1325 aa20.23■□□□□ 0.83
SF3B2-211ENST00000531041 TRAF5O00463 557 aa20.23■□□□□ 0.83
SF3B2-211ENST00000531041 SUPT20HL1Q3ZLR7 823 aa20.23■□□□□ 0.83
SF3B2-211ENST00000531041 SBK1Q52WX2 424 aa20.23■□□□□ 0.83
SF3B2-211ENST00000531041 NBPF12Q5TAG4 269 aaPredicted RBP20.23■□□□□ 0.83
SF3B2-211ENST00000531041 DLK2Q6UY11 383 aa20.23■□□□□ 0.83
SF3B2-211ENST00000531041 CDAN1Q8IWY9 1227 aa20.23■□□□□ 0.83
SF3B2-211ENST00000531041 CSRNP1Q96S65 589 aa20.23■□□□□ 0.83
SF3B2-211ENST00000531041 USP17L12C9JPN9 530 aa20.22■□□□□ 0.83
SF3B2-211ENST00000531041 USP17L21D6R901 530 aa20.22■□□□□ 0.83
SF3B2-211ENST00000531041 FGAP02671 866 aa20.22■□□□□ 0.83
SF3B2-211ENST00000531041 TDO2P48775 406 aa20.22■□□□□ 0.83
SF3B2-211ENST00000531041 CTR9Q6PD62 1173 aa20.22■□□□□ 0.83
SF3B2-211ENST00000531041 TTC6Q86TZ1 520 aa20.22■□□□□ 0.83
SF3B2-211ENST00000531041 HOOK2Q96ED9 719 aa20.22■□□□□ 0.83
SF3B2-211ENST00000531041 NAPBQ9H115 298 aa20.22■□□□□ 0.83
SF3B2-211ENST00000531041 PI4KBQ9UBF8 816 aa20.22■□□□□ 0.83
SF3B2-211ENST00000531041 ARPP21Q9UBL0 812 aaPredicted RBP20.22■□□□□ 0.83
SF3B2-211ENST00000531041 PASKQ96RG2 1323 aa20.22■□□□□ 0.83
SF3B2-211ENST00000531041 SSC5DA1L4H1 1573 aa20.22■□□□□ 0.83
SF3B2-211ENST00000531041 POLR3DP05423 398 aaPredicted RBP20.21■□□□□ 0.83
SF3B2-211ENST00000531041 C12orf60Q5U649 245 aa20.21■□□□□ 0.83
SF3B2-211ENST00000531041 KIAA1211Q6ZU35 1233 aa20.21■□□□□ 0.83
SF3B2-211ENST00000531041 AMOTL1Q8IY63 956 aa20.21■□□□□ 0.83
SF3B2-211ENST00000531041 ATAD5Q96QE3 1844 aa20.21■□□□□ 0.83
SF3B2-211ENST00000531041 PAPPA2Q9BXP8 1791 aa20.21■□□□□ 0.83
SF3B2-211ENST00000531041 OTOFQ9HC10 1997 aa20.21■□□□□ 0.83
SF3B2-211ENST00000531041 HLA-DOAP06340 250 aa20.2■□□□□ 0.82
SF3B2-211ENST00000531041 NF2P35240 595 aa20.2■□□□□ 0.82
SF3B2-211ENST00000531041 PLCD1P51178 756 aa20.2■□□□□ 0.82
SF3B2-211ENST00000531041 MAP3K10Q02779 954 aa20.2■□□□□ 0.82
SF3B2-211ENST00000531041 PTH1RQ03431 593 aa20.2■□□□□ 0.82
SF3B2-211ENST00000531041 FMR1Q06787 632 aaKnown RBP eCLIP20.2■□□□□ 0.821e-6■■□□□ 12.2
SF3B2-211ENST00000531041 METTL16Q86W50 562 aaKnown RBP20.2■□□□□ 0.82
SF3B2-211ENST00000531041 FOXP4Q8IVH2 680 aaPredicted RBP20.2■□□□□ 0.82
SF3B2-211ENST00000531041 TBC1D12O60347 775 aa20.19■□□□□ 0.82
SF3B2-211ENST00000531041 MAP4K1Q92918 833 aa20.19■□□□□ 0.82
SF3B2-211ENST00000531041 LSG1Q9H089 658 aaKnown RBP20.19■□□□□ 0.82
SF3B2-211ENST00000531041 EHD4Q9H223 541 aa20.19■□□□□ 0.82
SF3B2-211ENST00000531041 ANO2Q9NQ90 1003 aa20.19■□□□□ 0.82
SF3B2-211ENST00000531041 SLC4A8Q2Y0W8 1093 aa20.19■□□□□ 0.82
SF3B2-211ENST00000531041 CTNNA3Q9UI47 895 aa20.19■□□□□ 0.82
SF3B2-211ENST00000531041 HERC5Q9UII4 1024 aaKnown RBP20.19■□□□□ 0.82
SF3B2-211ENST00000531041 SERPINB13Q9UIV8 391 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms