RNA–Protein interactions for RNA: ENST00000527189.5

CAPN1-207, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 558 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-207ENST00000527189 TNNI3KQ59H18 835 aa16.47■□□□□ 0.23
CAPN1-207ENST00000527189 HABP4Q5JVS0 413 aaKnown RBP16.47■□□□□ 0.23
CAPN1-207ENST00000527189 NOL9Q5SY16 702 aaKnown RBP16.47■□□□□ 0.23
CAPN1-207ENST00000527189 NSUN4Q96CB9 384 aaKnown RBP16.47■□□□□ 0.23
CAPN1-207ENST00000527189 FPGT-TNNI3KV9GXZ4 949 aa16.47■□□□□ 0.23
CAPN1-207ENST00000527189 MYH2Q9UKX2 1941 aa16.47■□□□□ 0.23
CAPN1-207ENST00000527189 INPP5BP32019 993 aa16.46■□□□□ 0.23
CAPN1-207ENST00000527189 MCAMP43121 646 aa16.46■□□□□ 0.23
CAPN1-207ENST00000527189 ARHGEF6Q15052 776 aa16.46■□□□□ 0.23
CAPN1-207ENST00000527189 ZFPM1Q8IX07 1006 aa16.46■□□□□ 0.23
CAPN1-207ENST00000527189 RHBDL3P58872 404 aa16.45■□□□□ 0.22
CAPN1-207ENST00000527189 TAF1CQ15572 869 aaPredicted RBP16.45■□□□□ 0.22
CAPN1-207ENST00000527189 TTC39AQ5SRH9 613 aa16.45■□□□□ 0.22
CAPN1-207ENST00000527189 OTOP1Q7RTM1 612 aa16.45■□□□□ 0.22
CAPN1-207ENST00000527189 FAM43AQ8N2R8 423 aa16.45■□□□□ 0.22
CAPN1-207ENST00000527189 ZNF384Q8TF68 577 aa16.45■□□□□ 0.22
CAPN1-207ENST00000527189 GCC1Q96CN9 775 aa16.45■□□□□ 0.22
CAPN1-207ENST00000527189 C1orf115Q9H7X2 142 aa16.45■□□□□ 0.22
CAPN1-207ENST00000527189 LRP2BPQ9P2M1 347 aa16.45■□□□□ 0.22
CAPN1-207ENST00000527189 KCNH4Q9UQ05 1017 aa16.45■□□□□ 0.22
CAPN1-207ENST00000527189 TRIM17Q9Y577 477 aa16.45■□□□□ 0.22
CAPN1-207ENST00000527189 RFX7Q2KHR2 1363 aa16.45■□□□□ 0.22
CAPN1-207ENST00000527189 PHF20L1A8MW92 1017 aa16.44■□□□□ 0.22
CAPN1-207ENST00000527189 CEP85Q6P2H3 762 aa16.44■□□□□ 0.22
CAPN1-207ENST00000527189 PI16Q6UXB8 463 aa16.44■□□□□ 0.22
CAPN1-207ENST00000527189 TBC1D9Q6ZT07 1266 aa16.44■□□□□ 0.22
CAPN1-207ENST00000527189 ZSCAN29Q8IWY8 852 aaPredicted RBP16.44■□□□□ 0.22
CAPN1-207ENST00000527189 RAI14Q9P0K7 980 aa16.44■□□□□ 0.22
CAPN1-207ENST00000527189 AK9Q5TCS8 1911 aa16.44■□□□□ 0.22
CAPN1-207ENST00000527189 ATRNL1Q5VV63 1379 aa16.43■□□□□ 0.22
CAPN1-207ENST00000527189 BTBD19C9JJ37 291 aa16.43■□□□□ 0.22
CAPN1-207ENST00000527189 CXCL11O14625 94 aa16.43■□□□□ 0.22
CAPN1-207ENST00000527189 TBC1D12O60347 775 aa16.43■□□□□ 0.22
CAPN1-207ENST00000527189 TLR2O60603 784 aa16.43■□□□□ 0.22
CAPN1-207ENST00000527189 HSP90AB4PQ58FF6 505 aa16.43■□□□□ 0.22
CAPN1-207ENST00000527189 SH3BP5LQ7L8J4 393 aa16.43■□□□□ 0.22
CAPN1-207ENST00000527189 ERC1Q8IUD2 1116 aa16.43■□□□□ 0.22
CAPN1-207ENST00000527189 PANK1Q8TE04 598 aa16.43■□□□□ 0.22
CAPN1-207ENST00000527189 DBNDD2Q9BQY9 259 aa16.43■□□□□ 0.22
CAPN1-207ENST00000527189 CHMP4BQ9H444 224 aaKnown RBP16.43■□□□□ 0.22
CAPN1-207ENST00000527189 EFCC1Q9HA90 598 aa16.43■□□□□ 0.22
CAPN1-207ENST00000527189 DDTLA6NHG4 134 aaPredicted RBP16.42■□□□□ 0.22
CAPN1-207ENST00000527189 CTNND1O60716 968 aaKnown RBP16.42■□□□□ 0.22
CAPN1-207ENST00000527189 BAG3O95817 575 aa16.42■□□□□ 0.22
CAPN1-207ENST00000527189 ANKRD23Q86SG2 305 aa16.42■□□□□ 0.22
CAPN1-207ENST00000527189 SCYL3Q8IZE3 742 aa16.42■□□□□ 0.22
CAPN1-207ENST00000527189 CD99L2Q8TCZ2 262 aa16.42■□□□□ 0.22
CAPN1-207ENST00000527189 DDX4Q9NQI0 724 aaKnown RBP16.42■□□□□ 0.22
CAPN1-207ENST00000527189 PTPN22Q9Y2R2 807 aa16.42■□□□□ 0.22
CAPN1-207ENST00000527189 CUL9Q8IWT3 2517 aa16.42■□□□□ 0.22
CAPN1-207ENST00000527189 PLCG2P16885 1265 aa16.41■□□□□ 0.22
CAPN1-207ENST00000527189 PPP4CP60510 307 aa16.41■□□□□ 0.22
CAPN1-207ENST00000527189 PICALMQ13492 652 aa16.41■□□□□ 0.22
CAPN1-207ENST00000527189 TMED8Q6PL24 325 aaPredicted RBP16.41■□□□□ 0.22
CAPN1-207ENST00000527189 RPAP2Q8IXW5 612 aaPredicted RBP16.41■□□□□ 0.22
CAPN1-207ENST00000527189 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.41■□□□□ 0.22
CAPN1-207ENST00000527189 NOL10Q9BSC4 688 aaKnown RBP16.41■□□□□ 0.22
CAPN1-207ENST00000527189 PICK1Q9NRD5 415 aa16.41■□□□□ 0.22
CAPN1-207ENST00000527189 DDX19BQ9UMR2 479 aa16.41■□□□□ 0.22
CAPN1-207ENST00000527189 CEP290O15078 2479 aa16.41■□□□□ 0.22
CAPN1-207ENST00000527189 COL6A3P12111 3177 aa16.4■□□□□ 0.22
CAPN1-207ENST00000527189 CYP2E1P05181 493 aaPredicted RBP16.4■□□□□ 0.22
CAPN1-207ENST00000527189 NAA16Q6N069 864 aaPredicted RBP16.4■□□□□ 0.22
CAPN1-207ENST00000527189 EAF2Q96CJ1 260 aaPredicted RBP16.4■□□□□ 0.22
CAPN1-207ENST00000527189 DBNLQ9UJU6 430 aaKnown RBP16.4■□□□□ 0.22
CAPN1-207ENST00000527189 COL2A1P02458 1487 aaPredicted RBP16.4■□□□□ 0.22
CAPN1-207ENST00000527189 RANBP2P49792 3224 aaKnown RBP16.4■□□□□ 0.22
CAPN1-207ENST00000527189 GNRH1P01148 92 aa16.39■□□□□ 0.21
CAPN1-207ENST00000527189 PTPRAP18433 802 aa16.39■□□□□ 0.21
CAPN1-207ENST00000527189 FXR1P51114 621 aaKnown RBP eCLIP16.39■□□□□ 0.21
CAPN1-207ENST00000527189 KIF22Q14807 665 aa16.39■□□□□ 0.21
CAPN1-207ENST00000527189 FASTKD5Q7L8L6 764 aaKnown RBP16.39■□□□□ 0.21
CAPN1-207ENST00000527189 CCDC8Q9H0W5 538 aaPredicted RBP16.39■□□□□ 0.21
CAPN1-207ENST00000527189 OSBPL5Q9H0X9 879 aaPredicted RBP16.39■□□□□ 0.21
CAPN1-207ENST00000527189 DHX36Q9H2U1 1008 aaKnown RBP16.39■□□□□ 0.21
CAPN1-207ENST00000527189 SNRKQ9NRH2 765 aa16.39■□□□□ 0.21
CAPN1-207ENST00000527189 RCAN3Q9UKA8 241 aa16.39■□□□□ 0.21
CAPN1-207ENST00000527189 ZHX2Q9Y6X8 837 aa16.39■□□□□ 0.21
CAPN1-207ENST00000527189 TRIOBPQ9H2D6 2365 aa16.38■□□□□ 0.21
CAPN1-207ENST00000527189 PDHXO00330 501 aa16.38■□□□□ 0.21
CAPN1-207ENST00000527189 HMMRO75330 724 aa16.38■□□□□ 0.21
CAPN1-207ENST00000527189 ZAP70P43403 619 aa16.38■□□□□ 0.21
CAPN1-207ENST00000527189 MOGSQ13724 837 aa16.38■□□□□ 0.21
CAPN1-207ENST00000527189 C17orf99Q6UX52 265 aa16.38■□□□□ 0.21
CAPN1-207ENST00000527189 CERS3Q8IU89 383 aa16.38■□□□□ 0.21
CAPN1-207ENST00000527189 TEX11Q8IYF3 940 aa16.38■□□□□ 0.21
CAPN1-207ENST00000527189 ZBTB40Q9NUA8 1239 aa16.38■□□□□ 0.21
CAPN1-207ENST00000527189 AFG3L2Q9Y4W6 797 aa16.38■□□□□ 0.21
CAPN1-207ENST00000527189 RBBP6Q7Z6E9 1792 aaKnown RBP16.37■□□□□ 0.21
CAPN1-207ENST00000527189 A0A0G2JLL6 359 aaPredicted RBP16.37■□□□□ 0.21
CAPN1-207ENST00000527189 LACTBP83111 547 aaPredicted RBP16.37■□□□□ 0.21
CAPN1-207ENST00000527189 PRRT2Q7Z6L0 340 aaPredicted RBP16.37■□□□□ 0.21
CAPN1-207ENST00000527189 TBC1D2Q9BYX2 928 aa16.37■□□□□ 0.21
CAPN1-207ENST00000527189 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.37■□□□□ 0.21
CAPN1-207ENST00000527189 PI4KBQ9UBF8 816 aa16.37■□□□□ 0.21
CAPN1-207ENST00000527189 HERC5Q9UII4 1024 aaKnown RBP16.37■□□□□ 0.21
CAPN1-207ENST00000527189 EXOC6BQ9Y2D4 811 aa16.37■□□□□ 0.21
CAPN1-207ENST00000527189 SLC45A1Q9Y2W3 748 aa16.37■□□□□ 0.21
CAPN1-207ENST00000527189 DOCK2Q92608 1830 aa16.37■□□□□ 0.21
CAPN1-207ENST00000527189 PRMT2P55345 433 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms