RNA–Protein interactions for RNA: ENST00000527020.5

USH1C-205, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,159 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-205ENST00000527020 SLC12A7Q9Y666 1083 aa20.39■□□□□ 0.86
USH1C-205ENST00000527020 STK36Q9NRP7 1315 aa20.39■□□□□ 0.85
USH1C-205ENST00000527020 ZNF202O95125 648 aa20.39■□□□□ 0.85
USH1C-205ENST00000527020 PFKFB1P16118 471 aa20.39■□□□□ 0.85
USH1C-205ENST00000527020 U2AF2P26368 475 aaKnown RBP eCLIP20.39■□□□□ 0.85
USH1C-205ENST00000527020 MARCKSP29966 332 aaPredicted RBP20.39■□□□□ 0.85
USH1C-205ENST00000527020 MYRIPQ8NFW9 859 aa20.39■□□□□ 0.85
USH1C-205ENST00000527020 SMARCC1Q92922 1105 aaPredicted RBP20.39■□□□□ 0.85
USH1C-205ENST00000527020 MRFAP1L1Q96HT8 127 aa20.39■□□□□ 0.85
USH1C-205ENST00000527020 MAP3K14Q99558 947 aa20.39■□□□□ 0.85
USH1C-205ENST00000527020 LRP2BPQ9P2M1 347 aa20.39■□□□□ 0.85
USH1C-205ENST00000527020 ZNF652Q9Y2D9 606 aa20.39■□□□□ 0.85
USH1C-205ENST00000527020 DYNC1I1O14576 645 aa20.38■□□□□ 0.85
USH1C-205ENST00000527020 HSP90AA2PQ14568 343 aaPredicted RBP20.38■□□□□ 0.85
USH1C-205ENST00000527020 CLEC4GQ6UXB4 293 aa20.38■□□□□ 0.85
USH1C-205ENST00000527020 CEP57L1Q8IYX8 460 aa20.38■□□□□ 0.85
USH1C-205ENST00000527020 CDC5LQ99459 802 aaKnown RBP20.38■□□□□ 0.85
USH1C-205ENST00000527020 NACAP1Q9BZK3 213 aa20.38■□□□□ 0.85
USH1C-205ENST00000527020 BAZ2AQ9UIF9 1905 aaKnown RBP20.38■□□□□ 0.85
USH1C-205ENST00000527020 CCDC69A6NI79 296 aa20.38■□□□□ 0.85
USH1C-205ENST00000527020 NUTM2BA6NNL0 878 aaPredicted RBP20.38■□□□□ 0.85
USH1C-205ENST00000527020 NUTM2EB1AL46 878 aaPredicted RBP20.38■□□□□ 0.85
USH1C-205ENST00000527020 FMNL1O95466 1100 aaPredicted RBP20.38■□□□□ 0.85
USH1C-205ENST00000527020 NUTM2AQ8IVF1 878 aaPredicted RBP20.38■□□□□ 0.85
USH1C-205ENST00000527020 AOPEPQ8N6M6 819 aa20.38■□□□□ 0.85
USH1C-205ENST00000527020 CACTINQ8WUQ7 758 aaKnown RBP20.38■□□□□ 0.85
USH1C-205ENST00000527020 PRIMPOLQ96LW4 560 aa20.38■□□□□ 0.85
USH1C-205ENST00000527020 ZKSCAN3Q9BRR0 538 aa20.38■□□□□ 0.85
USH1C-205ENST00000527020 MYH6P13533 1939 aa20.37■□□□□ 0.85
USH1C-205ENST00000527020 MYH2Q9UKX2 1941 aa20.37■□□□□ 0.85
USH1C-205ENST00000527020 BECN2A8MW95 431 aa20.37■□□□□ 0.85
USH1C-205ENST00000527020 IFNAR1P17181 557 aa20.37■□□□□ 0.85
USH1C-205ENST00000527020 GYG1P46976 350 aa20.37■□□□□ 0.85
USH1C-205ENST00000527020 SF3B3Q15393 1217 aaKnown RBP20.37■□□□□ 0.85
USH1C-205ENST00000527020 DPCR1Q3MIW9 517 aa20.37■□□□□ 0.85
USH1C-205ENST00000527020 RRP12Q5JTH9 1297 aaKnown RBP20.37■□□□□ 0.85
USH1C-205ENST00000527020 FBXW7Q969H0 707 aa20.37■□□□□ 0.85
USH1C-205ENST00000527020 GNL3Q9BVP2 549 aaKnown RBP eCLIP20.37■□□□□ 0.85
USH1C-205ENST00000527020 SLC26A6Q9BXS9 759 aa20.37■□□□□ 0.85
USH1C-205ENST00000527020 CYP7A1P22680 504 aa20.36■□□□□ 0.85
USH1C-205ENST00000527020 GUCY1A2P33402 732 aa20.36■□□□□ 0.85
USH1C-205ENST00000527020 PPP6R2O75170 966 aa20.36■□□□□ 0.85
USH1C-205ENST00000527020 RBM10P98175 930 aaKnown RBP20.36■□□□□ 0.85
USH1C-205ENST00000527020 SSRP1Q08945 709 aaKnown RBP20.36■□□□□ 0.85
USH1C-205ENST00000527020 TAOK2Q9UL54 1235 aa20.36■□□□□ 0.85
USH1C-205ENST00000527020 HPSEQ9Y251 543 aa20.36■□□□□ 0.85
USH1C-205ENST00000527020 SHC4Q6S5L8 630 aa20.35■□□□□ 0.85
USH1C-205ENST00000527020 ANKRD18AQ8IVF6 992 aa20.35■□□□□ 0.85
USH1C-205ENST00000527020 STK11IPQ8N1F8 1099 aa20.35■□□□□ 0.85
USH1C-205ENST00000527020 SMIM22K7EJ46 135 aa20.35■□□□□ 0.85
USH1C-205ENST00000527020 SLC3A2P08195 630 aaKnown RBP20.35■□□□□ 0.85
USH1C-205ENST00000527020 KCNQ4P56696 695 aa20.35■□□□□ 0.85
USH1C-205ENST00000527020 PPARAQ07869 468 aa20.35■□□□□ 0.85
USH1C-205ENST00000527020 UBE4AQ14139 1066 aa20.35■□□□□ 0.85
USH1C-205ENST00000527020 WTAPQ15007 396 aa20.35■□□□□ 0.85
USH1C-205ENST00000527020 NBPF11Q86T75 865 aa20.35■□□□□ 0.85
USH1C-205ENST00000527020 SDR42E1Q8WUS8 393 aa20.35■□□□□ 0.85
USH1C-205ENST00000527020 BPIFA3Q9BQP9 254 aa20.35■□□□□ 0.85
USH1C-205ENST00000527020 RIOK1Q9BRS2 568 aaKnown RBP20.34■□□□□ 0.85
USH1C-205ENST00000527020 MTA3Q9BTC8 594 aa20.34■□□□□ 0.85
USH1C-205ENST00000527020 NAT10Q9H0A0 1025 aaKnown RBP20.34■□□□□ 0.85
USH1C-205ENST00000527020 TOMM22Q9NS69 142 aa20.34■□□□□ 0.85
USH1C-205ENST00000527020 BSDC1Q9NW68 430 aaPredicted RBP20.34■□□□□ 0.85
USH1C-205ENST00000527020 ABCF2Q9UG63 623 aa20.34■□□□□ 0.85
USH1C-205ENST00000527020 MYH13Q9UKX3 1938 aa20.34■□□□□ 0.85
USH1C-205ENST00000527020 FAM237AA0A1B0GTK4 181 aa20.34■□□□□ 0.85
USH1C-205ENST00000527020 TRIM29Q14134 588 aa20.34■□□□□ 0.85
USH1C-205ENST00000527020 RTN1Q16799 776 aa20.34■□□□□ 0.85
USH1C-205ENST00000527020 SMIM5Q71RC9 77 aa20.34■□□□□ 0.85
USH1C-205ENST00000527020 TIGD1Q96MW7 591 aa20.34■□□□□ 0.85
USH1C-205ENST00000527020 ANAPC4Q9UJX5 808 aa20.34■□□□□ 0.85
USH1C-205ENST00000527020 MINPP1Q9UNW1 487 aa20.34■□□□□ 0.85
USH1C-205ENST00000527020 GTF2F1P35269 517 aaKnown RBP eCLIP20.33■□□□□ 0.85
USH1C-205ENST00000527020 NLRP12P59046 1061 aa20.33■□□□□ 0.85
USH1C-205ENST00000527020 RBM6P78332 1123 aaKnown RBP20.33■□□□□ 0.85
USH1C-205ENST00000527020 GNL2Q13823 731 aaKnown RBP20.33■□□□□ 0.85
USH1C-205ENST00000527020 ARID5BQ14865 1188 aa20.33■□□□□ 0.85
USH1C-205ENST00000527020 ZNF384Q8TF68 577 aa20.33■□□□□ 0.85
USH1C-205ENST00000527020 BCL2L12Q9HB09 334 aa20.33■□□□□ 0.85
USH1C-205ENST00000527020 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.33■□□□□ 0.85
USH1C-205ENST00000527020 DUOX1Q9NRD9 1551 aa20.33■□□□□ 0.85
USH1C-205ENST00000527020 RAI14Q9P0K7 980 aa20.33■□□□□ 0.85
USH1C-205ENST00000527020 MAGEB6P1A0A0J9YX57 407 aa20.32■□□□□ 0.84
USH1C-205ENST00000527020 SART3Q15020 963 aaKnown RBP20.32■□□□□ 0.84
USH1C-205ENST00000527020 CLIC6Q96NY7 704 aa20.32■□□□□ 0.84
USH1C-205ENST00000527020 DLEC1Q9Y238 1755 aa20.32■□□□□ 0.84
USH1C-205ENST00000527020 COL24A1Q17RW2 1714 aa20.32■□□□□ 0.84
USH1C-205ENST00000527020 BIN1O00499 593 aa20.32■□□□□ 0.84
USH1C-205ENST00000527020 MMP1P03956 469 aa20.32■□□□□ 0.84
USH1C-205ENST00000527020 SYKP43405 635 aa20.32■□□□□ 0.84
USH1C-205ENST00000527020 SEC23AQ15436 765 aa20.32■□□□□ 0.84
USH1C-205ENST00000527020 RESP18Q5W5W9 173 aa20.32■□□□□ 0.84
USH1C-205ENST00000527020 TBC1D9BQ66K14 1250 aa20.32■□□□□ 0.84
USH1C-205ENST00000527020 LRRC8AQ8IWT6 810 aa20.32■□□□□ 0.84
USH1C-205ENST00000527020 CELF1Q92879 486 aaKnown RBP20.32■□□□□ 0.84
USH1C-205ENST00000527020 RNF41Q9H4P4 317 aaPredicted RBP20.32■□□□□ 0.84
USH1C-205ENST00000527020 BTBD18B2RXH4 712 aa20.31■□□□□ 0.84
USH1C-205ENST00000527020 PTF1AQ7RTS3 328 aa20.31■□□□□ 0.84
USH1C-205ENST00000527020 NOSTRINQ8IVI9 506 aa20.31■□□□□ 0.84
USH1C-205ENST00000527020 ZNF654Q8IZM8 581 aa20.31■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 99.7 ms