RNA–Protein interactions for RNA: ENST00000526216.1

COLCA2-202, Transcript of colorectal cancer associated 2, humanhuman

TSL 1 (best) BASIC

Gene COLCA2, Length 1,332 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2-202ENST00000526216 INCENPQ9NQS7 918 aa17.14■□□□□ 0.33
COLCA2-202ENST00000526216 USP40Q9NVE5 1235 aa17.14■□□□□ 0.33
COLCA2-202ENST00000526216 RNF181Q9P0P0 153 aa17.14■□□□□ 0.33
COLCA2-202ENST00000526216 FLT1P17948 1338 aa17.13■□□□□ 0.33
COLCA2-202ENST00000526216 USP17L8P0C7I0 530 aa17.13■□□□□ 0.33
COLCA2-202ENST00000526216 PLCG2P16885 1265 aa17.13■□□□□ 0.33
COLCA2-202ENST00000526216 CASTP20810 708 aaKnown RBP17.13■□□□□ 0.33
COLCA2-202ENST00000526216 USP5P45974 858 aa17.13■□□□□ 0.33
COLCA2-202ENST00000526216 GPR162Q16538 588 aa17.13■□□□□ 0.33
COLCA2-202ENST00000526216 C9orf131Q5VYM1 1079 aa17.13■□□□□ 0.33
COLCA2-202ENST00000526216 PRMT6Q96LA8 375 aaPredicted RBP17.13■□□□□ 0.33
COLCA2-202ENST00000526216 ANAPC4Q9UJX5 808 aa17.13■□□□□ 0.33
COLCA2-202ENST00000526216 GJA3Q9Y6H8 435 aa17.13■□□□□ 0.33
COLCA2-202ENST00000526216 NEDD4P46934 1319 aa17.12■□□□□ 0.33
COLCA2-202ENST00000526216 USP17L12C9JPN9 530 aa17.12■□□□□ 0.33
COLCA2-202ENST00000526216 USP17L21D6R901 530 aa17.12■□□□□ 0.33
COLCA2-202ENST00000526216 ZNF280AP59817 542 aaPredicted RBP17.12■□□□□ 0.33
COLCA2-202ENST00000526216 PPARAQ07869 468 aa17.12■□□□□ 0.33
COLCA2-202ENST00000526216 NFIAQ12857 509 aa17.12■□□□□ 0.33
COLCA2-202ENST00000526216 SBK1Q52WX2 424 aa17.12■□□□□ 0.33
COLCA2-202ENST00000526216 MTMR14Q8NCE2 650 aa17.12■□□□□ 0.33
COLCA2-202ENST00000526216 TBC1D2Q9BYX2 928 aa17.12■□□□□ 0.33
COLCA2-202ENST00000526216 SPDYE2BA6NHP3 402 aa17.11■□□□□ 0.33
COLCA2-202ENST00000526216 MINDY4BA8MYZ0 360 aa17.11■□□□□ 0.33
COLCA2-202ENST00000526216 EGFRP00533 1210 aa17.11■□□□□ 0.33
COLCA2-202ENST00000526216 SPDYE6P0CI01 402 aa17.11■□□□□ 0.33
COLCA2-202ENST00000526216 RPS12P25398 132 aaKnown RBP17.11■□□□□ 0.33
COLCA2-202ENST00000526216 NEK4P51957 841 aa17.11■□□□□ 0.33
COLCA2-202ENST00000526216 RBM5P52756 815 aaKnown RBP eCLIP17.11■□□□□ 0.33
COLCA2-202ENST00000526216 CACNB3P54284 484 aa17.11■□□□□ 0.33
COLCA2-202ENST00000526216 KRT32Q14532 448 aa17.11■□□□□ 0.33
COLCA2-202ENST00000526216 SNX21Q969T3 373 aa17.11■□□□□ 0.33
COLCA2-202ENST00000526216 NEK1Q96PY6 1258 aa17.11■□□□□ 0.33
COLCA2-202ENST00000526216 TDRD3Q9H7E2 651 aaKnown RBP17.11■□□□□ 0.33
COLCA2-202ENST00000526216 FAM198AQ9UFP1 575 aa17.11■□□□□ 0.33
COLCA2-202ENST00000526216 SAP30BPQ9UHR5 308 aaKnown RBP17.11■□□□□ 0.33
COLCA2-202ENST00000526216 HDAC9Q9UKV0 1011 aa17.11■□□□□ 0.33
COLCA2-202ENST00000526216 SIPA1L1O43166 1804 aa17.1■□□□□ 0.33
COLCA2-202ENST00000526216 MYH1P12882 1939 aa17.1■□□□□ 0.33
COLCA2-202ENST00000526216 RPS6KB1P23443 525 aa17.1■□□□□ 0.33
COLCA2-202ENST00000526216 SLC4A8Q2Y0W8 1093 aa17.1■□□□□ 0.33
COLCA2-202ENST00000526216 C12orf60Q5U649 245 aa17.1■□□□□ 0.33
COLCA2-202ENST00000526216 RUFY3Q7L099 469 aa17.1■□□□□ 0.33
COLCA2-202ENST00000526216 ZFPM1Q8IX07 1006 aa17.1■□□□□ 0.33
COLCA2-202ENST00000526216 MB21D2Q8IYB1 491 aaPredicted RBP17.1■□□□□ 0.33
COLCA2-202ENST00000526216 DPF2Q92785 391 aa17.1■□□□□ 0.33
COLCA2-202ENST00000526216 TCEANC2Q96MN5 208 aa17.1■□□□□ 0.33
COLCA2-202ENST00000526216 MCM9Q9NXL9 1143 aa17.1■□□□□ 0.33
COLCA2-202ENST00000526216 ARPP21Q9UBL0 812 aaPredicted RBP17.1■□□□□ 0.33
COLCA2-202ENST00000526216 ROBO3Q96MS0 1386 aa17.1■□□□□ 0.33
COLCA2-202ENST00000526216 ANTXR2P58335 489 aa17.09■□□□□ 0.33
COLCA2-202ENST00000526216 PICALMQ13492 652 aa17.09■□□□□ 0.33
COLCA2-202ENST00000526216 DLGAP5Q15398 846 aa17.09■□□□□ 0.33
COLCA2-202ENST00000526216 AKNAD1Q5T1N1 836 aa17.09■□□□□ 0.33
COLCA2-202ENST00000526216 BLOC1S2Q6QNY1 142 aa17.09■□□□□ 0.33
COLCA2-202ENST00000526216 MICALL2Q8IY33 904 aa17.09■□□□□ 0.33
COLCA2-202ENST00000526216 STK11IPQ8N1F8 1099 aa17.09■□□□□ 0.33
COLCA2-202ENST00000526216 STAG1Q8WVM7 1258 aa17.09■□□□□ 0.33
COLCA2-202ENST00000526216 IDI2Q9BXS1 227 aa17.09■□□□□ 0.33
COLCA2-202ENST00000526216 MYOZ2Q9NPC6 264 aa17.09■□□□□ 0.33
COLCA2-202ENST00000526216 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.09■□□□□ 0.33
COLCA2-202ENST00000526216 PSMA5P28066 241 aa17.08■□□□□ 0.32
COLCA2-202ENST00000526216 SLC4A3P48751 1232 aa17.08■□□□□ 0.32
COLCA2-202ENST00000526216 PLCD1P51178 756 aa17.08■□□□□ 0.32
COLCA2-202ENST00000526216 EXOSC10Q01780 885 aaKnown RBP17.08■□□□□ 0.32
COLCA2-202ENST00000526216 GPC2Q8N158 579 aa17.08■□□□□ 0.32
COLCA2-202ENST00000526216 OGFOD1Q8N543 542 aa17.08■□□□□ 0.32
COLCA2-202ENST00000526216 DDRGK1Q96HY6 314 aa17.08■□□□□ 0.32
COLCA2-202ENST00000526216 IPO9Q96P70 1041 aaKnown RBP17.08■□□□□ 0.32
COLCA2-202ENST00000526216 OSBPL5Q9H0X9 879 aaPredicted RBP17.08■□□□□ 0.32
COLCA2-202ENST00000526216 CNOT7Q9UIV1 285 aaKnown RBP17.08■□□□□ 0.32
COLCA2-202ENST00000526216 CYP46A1Q9Y6A2 500 aa17.08■□□□□ 0.32
COLCA2-202ENST00000526216 CLRN2A0PK11 232 aa17.07■□□□□ 0.32
COLCA2-202ENST00000526216 FGRP09769 529 aa17.07■□□□□ 0.32
COLCA2-202ENST00000526216 AK2P54819 239 aa17.07■□□□□ 0.32
COLCA2-202ENST00000526216 NBPF9Q3BBW0 867 aa17.07■□□□□ 0.32
COLCA2-202ENST00000526216 SPDYE2Q495Y8 402 aa17.07■□□□□ 0.32
COLCA2-202ENST00000526216 CYB5R4Q7L1T6 521 aa17.07■□□□□ 0.32
COLCA2-202ENST00000526216 SH3BP5LQ7L8J4 393 aa17.07■□□□□ 0.32
COLCA2-202ENST00000526216 DYNLL2Q96FJ2 89 aa17.07■□□□□ 0.32
COLCA2-202ENST00000526216 LRRC2Q9BYS8 371 aa17.07■□□□□ 0.32
COLCA2-202ENST00000526216 PDRG1Q9NUG6 133 aa17.07■□□□□ 0.32
COLCA2-202ENST00000526216 ZNF70Q9UC06 446 aaPredicted RBP17.07■□□□□ 0.32
COLCA2-202ENST00000526216 B4E1Z4 1266 aa17.06■□□□□ 0.32
COLCA2-202ENST00000526216 WNT10BO00744 389 aa17.06■□□□□ 0.32
COLCA2-202ENST00000526216 GRIN3BO60391 1043 aa17.06■□□□□ 0.32
COLCA2-202ENST00000526216 DDNO94850 711 aaPredicted RBP17.06■□□□□ 0.32
COLCA2-202ENST00000526216 TOB2Q14106 344 aaPredicted RBP17.06■□□□□ 0.32
COLCA2-202ENST00000526216 CHST3Q7LGC8 479 aa17.06■□□□□ 0.32
COLCA2-202ENST00000526216 SAMD7Q7Z3H4 446 aa17.06■□□□□ 0.32
COLCA2-202ENST00000526216 NCOA7Q8NI08 942 aa17.06■□□□□ 0.32
COLCA2-202ENST00000526216 ALDH8A1Q9H2A2 487 aaPredicted RBP17.06■□□□□ 0.32
COLCA2-202ENST00000526216 GPRC5DQ9NZD1 345 aa17.06■□□□□ 0.32
COLCA2-202ENST00000526216 CNTNAP1P78357 1384 aa17.06■□□□□ 0.32
COLCA2-202ENST00000526216 ASTN2O75129 1339 aaPredicted RBP17.06■□□□□ 0.32
COLCA2-202ENST00000526216 ST18O60284 1047 aa17.05■□□□□ 0.32
COLCA2-202ENST00000526216 NPM3O75607 178 aaKnown RBP17.05■□□□□ 0.32
COLCA2-202ENST00000526216 SLURP2P0DP57 97 aa17.05■□□□□ 0.32
COLCA2-202ENST00000526216 TBC1D10BQ4KMP7 808 aaPredicted RBP17.05■□□□□ 0.32
COLCA2-202ENST00000526216 DHX32Q7L7V1 743 aaKnown RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms