RNA–Protein interactions for RNA: ENST00000524126.5

SPIDR-224, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 1 (best)

Gene SPIDR, Length 2,614 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-224ENST00000524126 TBX2Q13207 712 aaPredicted RBP11.6□□□□□ -0.55
SPIDR-224ENST00000524126 MTHFSDQ2M296 383 aaKnown RBP11.6□□□□□ -0.55
SPIDR-224ENST00000524126 Q6ZUG5 572 aa11.6□□□□□ -0.55
SPIDR-224ENST00000524126 CTAGE6Q86UF2 777 aa11.6□□□□□ -0.55
SPIDR-224ENST00000524126 CTAGE4Q8IX94 777 aa11.6□□□□□ -0.55
SPIDR-224ENST00000524126 ZNF396Q96N95 335 aaPredicted RBP11.6□□□□□ -0.55
SPIDR-224ENST00000524126 CDC5LQ99459 802 aaKnown RBP11.6□□□□□ -0.55
SPIDR-224ENST00000524126 SHTN1A0MZ66 631 aa11.59□□□□□ -0.55
SPIDR-224ENST00000524126 IKBKBO14920 756 aa11.59□□□□□ -0.55
SPIDR-224ENST00000524126 PFKFB2O60825 505 aa11.59□□□□□ -0.55
SPIDR-224ENST00000524126 GCP02774 474 aa11.59□□□□□ -0.55
SPIDR-224ENST00000524126 A1BGP04217 495 aa11.59□□□□□ -0.55
SPIDR-224ENST00000524126 CAPS2Q9BXY5 557 aa11.59□□□□□ -0.55
SPIDR-224ENST00000524126 CLIC4Q9Y696 253 aa11.59□□□□□ -0.55
SPIDR-224ENST00000524126 RGPD1P0DJD0 1748 aa11.59□□□□□ -0.55
SPIDR-224ENST00000524126 MYH15Q9Y2K3 1946 aa11.59□□□□□ -0.55
SPIDR-224ENST00000524126 KLHL33A6NCF5 533 aa11.59□□□□□ -0.55
SPIDR-224ENST00000524126 GOLGA6CA6NDK9 693 aa11.59□□□□□ -0.55
SPIDR-224ENST00000524126 AGPSO00116 658 aa11.59□□□□□ -0.55
SPIDR-224ENST00000524126 GOLGA6DP0CG33 693 aa11.59□□□□□ -0.55
SPIDR-224ENST00000524126 MYL5Q02045 173 aa11.59□□□□□ -0.55
SPIDR-224ENST00000524126 OS9Q13438 667 aaPredicted RBP11.59□□□□□ -0.55
SPIDR-224ENST00000524126 STIM1Q13586 685 aa11.59□□□□□ -0.55
SPIDR-224ENST00000524126 RAD9BQ6WBX8 426 aa11.59□□□□□ -0.55
SPIDR-224ENST00000524126 ZNF526Q8TF50 670 aaPredicted RBP11.59□□□□□ -0.55
SPIDR-224ENST00000524126 TRIM6Q9C030 488 aaPredicted RBP11.59□□□□□ -0.55
SPIDR-224ENST00000524126 POLD4Q9HCU8 107 aa11.59□□□□□ -0.55
SPIDR-224ENST00000524126 RBM28Q9NW13 759 aaKnown RBP11.59□□□□□ -0.55
SPIDR-224ENST00000524126 GOLGA6AQ9NYA3 693 aa11.59□□□□□ -0.55
SPIDR-224ENST00000524126 ABCC6O95255 1503 aa11.59□□□□□ -0.55
SPIDR-224ENST00000524126 EIF3HO15372 352 aaKnown RBP eCLIP11.58□□□□□ -0.553e-7■□□□□ 10.4
SPIDR-224ENST00000524126 PDHBP11177 359 aa11.58□□□□□ -0.55
SPIDR-224ENST00000524126 CLNS1AP54105 237 aaKnown RBP11.58□□□□□ -0.55
SPIDR-224ENST00000524126 SF3A1Q15459 793 aaKnown RBP11.58□□□□□ -0.55
SPIDR-224ENST00000524126 OTUD7BQ6GQQ9 843 aa11.58□□□□□ -0.55
SPIDR-224ENST00000524126 ZNF589Q86UQ0 364 aaPredicted RBP11.58□□□□□ -0.55
SPIDR-224ENST00000524126 CEP57Q86XR8 500 aa11.58□□□□□ -0.55
SPIDR-224ENST00000524126 OTUD6BQ8N6M0 293 aa11.58□□□□□ -0.55
SPIDR-224ENST00000524126 HINFPQ9BQA5 517 aa11.58□□□□□ -0.55
SPIDR-224ENST00000524126 TACO1Q9BSH4 297 aaKnown RBP11.58□□□□□ -0.55
SPIDR-224ENST00000524126 TSPYL4Q9UJ04 414 aa11.58□□□□□ -0.55
SPIDR-224ENST00000524126 CRYBG1Q9Y4K1 1723 aa11.58□□□□□ -0.56
SPIDR-224ENST00000524126 PTPDC1A2A3K4 754 aa11.58□□□□□ -0.56
SPIDR-224ENST00000524126 KIF5CO60282 957 aa11.58□□□□□ -0.56
SPIDR-224ENST00000524126 CTDNEP1O95476 244 aa11.58□□□□□ -0.56
SPIDR-224ENST00000524126 CCDC175P0C221 793 aa11.58□□□□□ -0.56
SPIDR-224ENST00000524126 CALRP27797 417 aaKnown RBP11.58□□□□□ -0.56
SPIDR-224ENST00000524126 CCT2P78371 535 aaKnown RBP11.58□□□□□ -0.56
SPIDR-224ENST00000524126 POLA2Q14181 598 aa11.58□□□□□ -0.56
SPIDR-224ENST00000524126 ADALQ6DHV7 355 aa11.58□□□□□ -0.56
SPIDR-224ENST00000524126 AMOTL1Q8IY63 956 aa11.58□□□□□ -0.56
SPIDR-224ENST00000524126 NSUN7Q8NE18 718 aaKnown RBP11.58□□□□□ -0.56
SPIDR-224ENST00000524126 STK31Q9BXU1 1019 aa11.58□□□□□ -0.56
SPIDR-224ENST00000524126 NFAT5O94916 1531 aa11.58□□□□□ -0.56
SPIDR-224ENST00000524126 CTAGE9A4FU28 777 aa11.57□□□□□ -0.56
SPIDR-224ENST00000524126 FSBPO95073 299 aa11.57□□□□□ -0.56
SPIDR-224ENST00000524126 IRX1P78414 480 aaPredicted RBP11.57□□□□□ -0.56
SPIDR-224ENST00000524126 STK38Q15208 465 aa11.57□□□□□ -0.56
SPIDR-224ENST00000524126 CHRNA2Q15822 529 aa11.57□□□□□ -0.56
SPIDR-224ENST00000524126 FMNL3Q8IVF7 1028 aa11.57□□□□□ -0.56
SPIDR-224ENST00000524126 VIPAS39Q9H9C1 493 aa11.57□□□□□ -0.56
SPIDR-224ENST00000524126 NCOA5Q9HCD5 579 aaKnown RBP11.57□□□□□ -0.56
SPIDR-224ENST00000524126 KLC4Q9NSK0 619 aa11.57□□□□□ -0.56
SPIDR-224ENST00000524126 DDX20Q9UHI6 824 aaKnown RBP11.57□□□□□ -0.56
SPIDR-224ENST00000524126 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.57□□□□□ -0.56
SPIDR-224ENST00000524126 ADGRG1Q9Y653 693 aa11.57□□□□□ -0.56
SPIDR-224ENST00000524126 TRPM3Q9HCF6 1732 aaPredicted RBP11.57□□□□□ -0.56
SPIDR-224ENST00000524126 RTN2O75298 545 aa11.57□□□□□ -0.56
SPIDR-224ENST00000524126 KIAA0754O94854 1291 aa11.57□□□□□ -0.56
SPIDR-224ENST00000524126 SSBP05455 408 aaKnown RBP eCLIP11.57□□□□□ -0.56
SPIDR-224ENST00000524126 MYBL2P10244 700 aa11.57□□□□□ -0.56
SPIDR-224ENST00000524126 PDE4BQ07343 736 aa11.57□□□□□ -0.56
SPIDR-224ENST00000524126 NAA16Q6N069 864 aaPredicted RBP11.57□□□□□ -0.56
SPIDR-224ENST00000524126 SMARCC2Q8TAQ2 1214 aa11.57□□□□□ -0.56
SPIDR-224ENST00000524126 BORCS6Q96GS4 357 aa11.57□□□□□ -0.56
SPIDR-224ENST00000524126 RGPD5Q99666 1765 aa11.57□□□□□ -0.56
SPIDR-224ENST00000524126 POLR3DP05423 398 aaPredicted RBP11.56□□□□□ -0.56
SPIDR-224ENST00000524126 PPFIA1Q13136 1202 aa11.56□□□□□ -0.56
SPIDR-224ENST00000524126 PNOCQ13519 176 aa11.56□□□□□ -0.56
SPIDR-224ENST00000524126 WLSQ5T9L3 541 aa11.56□□□□□ -0.56
SPIDR-224ENST00000524126 ZNF483Q8TF39 744 aaPredicted RBP11.56□□□□□ -0.56
SPIDR-224ENST00000524126 CPLX3Q8WVH0 158 aa11.56□□□□□ -0.56
SPIDR-224ENST00000524126 ALDH8A1Q9H2A2 487 aaPredicted RBP11.56□□□□□ -0.56
SPIDR-224ENST00000524126 MROH7-TTC4A0A0A0MT08 1334 aa11.56□□□□□ -0.56
SPIDR-224ENST00000524126 IGSF1Q8N6C5 1336 aa11.56□□□□□ -0.56
SPIDR-224ENST00000524126 MAP3K5Q99683 1374 aa11.56□□□□□ -0.56
SPIDR-224ENST00000524126 PFKFB1P16118 471 aa11.56□□□□□ -0.56
SPIDR-224ENST00000524126 CDC27P30260 824 aa11.56□□□□□ -0.56
SPIDR-224ENST00000524126 CRYMQ14894 314 aa11.56□□□□□ -0.56
SPIDR-224ENST00000524126 E2F5Q15329 346 aa11.56□□□□□ -0.56
SPIDR-224ENST00000524126 WDR93Q6P2C0 686 aa11.56□□□□□ -0.56
SPIDR-224ENST00000524126 BRINP3Q76B58 766 aa11.56□□□□□ -0.56
SPIDR-224ENST00000524126 LINC00301Q8NCQ3 95 aa11.56□□□□□ -0.56
SPIDR-224ENST00000524126 COG1Q8WTW3 980 aa11.56□□□□□ -0.56
SPIDR-224ENST00000524126 CRACR2AQ9BSW2 395 aa11.56□□□□□ -0.56
SPIDR-224ENST00000524126 NDUFAB1O14561 156 aa11.56□□□□□ -0.56
SPIDR-224ENST00000524126 PDCLQ13371 301 aa11.56□□□□□ -0.56
SPIDR-224ENST00000524126 LONRF3Q496Y0 759 aa11.56□□□□□ -0.56
SPIDR-224ENST00000524126 CEP85LQ5SZL2 805 aa11.56□□□□□ -0.56
SPIDR-224ENST00000524126 RNF187Q5TA31 235 aaPredicted RBP11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms