RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 PPM1HQ9ULR3 514 aa7.66□□□□□ -1.18
HMGB1P1-201ENST00000522557 PCDHGC5Q9Y5F6 944 aa7.66□□□□□ -1.18
HMGB1P1-201ENST00000522557 SYNGAP1Q96PV0 1343 aa7.66□□□□□ -1.18
HMGB1P1-201ENST00000522557 DYNC1LI2O43237 492 aaPredicted RBP7.65□□□□□ -1.18
HMGB1P1-201ENST00000522557 SORBS3O60504 671 aa7.65□□□□□ -1.18
HMGB1P1-201ENST00000522557 RASIP1Q5U651 963 aa7.65□□□□□ -1.18
HMGB1P1-201ENST00000522557 GPBAR1Q8TDU6 330 aa7.65□□□□□ -1.18
HMGB1P1-201ENST00000522557 FANCD2OSQ96PS1 177 aa7.65□□□□□ -1.18
HMGB1P1-201ENST00000522557 EMILIN2Q9BXX0 1053 aa7.65□□□□□ -1.18
HMGB1P1-201ENST00000522557 CEP44Q9C0F1 390 aa7.65□□□□□ -1.18
HMGB1P1-201ENST00000522557 DISC1Q9NRI5 854 aa7.65□□□□□ -1.18
HMGB1P1-201ENST00000522557 PRKAG2Q9UGJ0 569 aa7.65□□□□□ -1.18
HMGB1P1-201ENST00000522557 AK5Q9Y6K8 562 aa7.65□□□□□ -1.18
HMGB1P1-201ENST00000522557 COBLO75128 1261 aa7.64□□□□□ -1.19
HMGB1P1-201ENST00000522557 CELA3AP09093 270 aa7.64□□□□□ -1.19
HMGB1P1-201ENST00000522557 EIF4BP23588 611 aaKnown RBP7.64□□□□□ -1.19
HMGB1P1-201ENST00000522557 CD97P48960 835 aa7.64□□□□□ -1.19
HMGB1P1-201ENST00000522557 ID3Q02535 119 aa7.64□□□□□ -1.19
HMGB1P1-201ENST00000522557 MAP7Q14244 749 aa7.64□□□□□ -1.19
HMGB1P1-201ENST00000522557 ANKRD24Q8TF21 1146 aa7.64□□□□□ -1.19
HMGB1P1-201ENST00000522557 GATA6Q92908 595 aa7.64□□□□□ -1.19
HMGB1P1-201ENST00000522557 CRELD1Q96HD1 420 aa7.64□□□□□ -1.19
HMGB1P1-201ENST00000522557 TBC1D32Q96NH3 1257 aa7.64□□□□□ -1.19
HMGB1P1-201ENST00000522557 DAGLAQ9Y4D2 1042 aa7.64□□□□□ -1.19
HMGB1P1-201ENST00000522557 HOXA10P31260 410 aaPredicted RBP7.63□□□□□ -1.19
HMGB1P1-201ENST00000522557 SEZ6L2Q6UXD5 910 aa7.63□□□□□ -1.19
HMGB1P1-201ENST00000522557 ZAR1Q86SH2 424 aa7.63□□□□□ -1.19
HMGB1P1-201ENST00000522557 C1GALT1Q9NS00 363 aa7.63□□□□□ -1.19
HMGB1P1-201ENST00000522557 ATG3Q9NT62 314 aa7.63□□□□□ -1.19
HMGB1P1-201ENST00000522557 PCMTD2Q9NV79 361 aa7.63□□□□□ -1.19
HMGB1P1-201ENST00000522557 FAM170BA6NMN3 283 aa7.62□□□□□ -1.19
HMGB1P1-201ENST00000522557 XPCQ01831 940 aaPredicted RBP7.62□□□□□ -1.19
HMGB1P1-201ENST00000522557 PSMD2Q13200 908 aa7.62□□□□□ -1.19
HMGB1P1-201ENST00000522557 TTLL4Q14679 1199 aa7.62□□□□□ -1.19
HMGB1P1-201ENST00000522557 ZC3H12AQ5D1E8 599 aaKnown RBP7.62□□□□□ -1.19
HMGB1P1-201ENST00000522557 ATXN3LQ9H3M9 355 aa7.62□□□□□ -1.19
HMGB1P1-201ENST00000522557 CACNA2D2Q9NY47 1150 aa7.62□□□□□ -1.19
HMGB1P1-201ENST00000522557 TTF2Q9UNY4 1162 aaKnown RBP7.62□□□□□ -1.19
HMGB1P1-201ENST00000522557 HCLS1P14317 486 aaPredicted RBP7.61□□□□□ -1.19
HMGB1P1-201ENST00000522557 ZC3H6P61129 1189 aaKnown RBP7.61□□□□□ -1.19
HMGB1P1-201ENST00000522557 NBPF11Q86T75 865 aa7.61□□□□□ -1.19
HMGB1P1-201ENST00000522557 ACSBG1Q96GR2 724 aa7.61□□□□□ -1.19
HMGB1P1-201ENST00000522557 OSBPL1AQ9BXW6 950 aa7.61□□□□□ -1.19
HMGB1P1-201ENST00000522557 PIDD1Q9HB75 910 aa7.61□□□□□ -1.19
HMGB1P1-201ENST00000522557 PIM2Q9P1W9 311 aa7.61□□□□□ -1.19
HMGB1P1-201ENST00000522557 SAMM50Q9Y512 469 aa7.61□□□□□ -1.19
HMGB1P1-201ENST00000522557 CSADQ9Y600 493 aa7.61□□□□□ -1.19
HMGB1P1-201ENST00000522557 RNGTTO60942 597 aaKnown RBP7.6□□□□□ -1.19
HMGB1P1-201ENST00000522557 ITGAEP38570 1179 aa7.6□□□□□ -1.19
HMGB1P1-201ENST00000522557 GRIK1P39086 918 aa7.6□□□□□ -1.19
HMGB1P1-201ENST00000522557 PCNX4Q63HM2 1172 aa7.6□□□□□ -1.19
HMGB1P1-201ENST00000522557 LLGL2Q6P1M3 1020 aa7.6□□□□□ -1.19
HMGB1P1-201ENST00000522557 INTS5Q6P9B9 1019 aaKnown RBP7.6□□□□□ -1.19
HMGB1P1-201ENST00000522557 SMYD4Q8IYR2 804 aaPredicted RBP7.6□□□□□ -1.19
HMGB1P1-201ENST00000522557 GIMAP7Q8NHV1 300 aa7.6□□□□□ -1.19
HMGB1P1-201ENST00000522557 LEMD3Q9Y2U8 911 aa7.6□□□□□ -1.19
HMGB1P1-201ENST00000522557 TRIM37O94972 964 aa7.59□□□□□ -1.19
HMGB1P1-201ENST00000522557 NEFMP07197 916 aa7.59□□□□□ -1.19
HMGB1P1-201ENST00000522557 PTPN11Q06124 597 aaPredicted RBP7.59□□□□□ -1.19
HMGB1P1-201ENST00000522557 MEI1Q5TIA1 1274 aa7.59□□□□□ -1.19
HMGB1P1-201ENST00000522557 SV2BQ7L1I2 683 aa7.59□□□□□ -1.19
HMGB1P1-201ENST00000522557 TINF2Q9BSI4 451 aa7.59□□□□□ -1.19
HMGB1P1-201ENST00000522557 CYP8B1Q9UNU6 501 aa7.59□□□□□ -1.19
HMGB1P1-201ENST00000522557 USP31Q70CQ4 1352 aa7.59□□□□□ -1.2
HMGB1P1-201ENST00000522557 KIAA1324LA8MWY0 1029 aaPredicted RBP7.58□□□□□ -1.2
HMGB1P1-201ENST00000522557 DCDC2CA8MYV0 355 aa7.58□□□□□ -1.2
HMGB1P1-201ENST00000522557 ADAMTS4O75173 837 aa7.58□□□□□ -1.2
HMGB1P1-201ENST00000522557 HNRNPUQ00839 825 aaKnown RBP eCLIP7.58□□□□□ -1.2
HMGB1P1-201ENST00000522557 CDK5R2Q13319 367 aa7.58□□□□□ -1.2
HMGB1P1-201ENST00000522557 LRRC14Q15048 493 aa7.58□□□□□ -1.2
HMGB1P1-201ENST00000522557 PPM1JQ5JR12 505 aa7.58□□□□□ -1.2
HMGB1P1-201ENST00000522557 ZNF765Q7L2R6 523 aa7.58□□□□□ -1.2
HMGB1P1-201ENST00000522557 C12orf40Q86WS4 652 aa7.58□□□□□ -1.2
HMGB1P1-201ENST00000522557 BCL11AQ9H165 835 aa7.58□□□□□ -1.2
HMGB1P1-201ENST00000522557 VTI1BQ9UEU0 232 aa7.58□□□□□ -1.2
HMGB1P1-201ENST00000522557 LOC105371045A0A1W2PR82 267 aa7.57□□□□□ -1.2
HMGB1P1-201ENST00000522557 SPINK2P20155 84 aa7.57□□□□□ -1.2
HMGB1P1-201ENST00000522557 ERVK-24P63145 666 aa7.57□□□□□ -1.2
HMGB1P1-201ENST00000522557 CCDC85BQ15834 202 aaPredicted RBP7.57□□□□□ -1.2
HMGB1P1-201ENST00000522557 TTBK2Q6IQ55 1244 aa7.57□□□□□ -1.2
HMGB1P1-201ENST00000522557 NT5DC4Q86YG4 428 aa7.57□□□□□ -1.2
HMGB1P1-201ENST00000522557 TMEM87AQ8NBN3 555 aa7.57□□□□□ -1.2
HMGB1P1-201ENST00000522557 ISL2Q96A47 359 aa7.57□□□□□ -1.2
HMGB1P1-201ENST00000522557 MRS2Q9HD23 443 aa7.57□□□□□ -1.2
HMGB1P1-201ENST00000522557 PCOLCE2Q9UKZ9 415 aa7.57□□□□□ -1.2
HMGB1P1-201ENST00000522557 PCDHA4Q9UN74 947 aa7.57□□□□□ -1.2
HMGB1P1-201ENST00000522557 CYP26A1O43174 497 aa7.56□□□□□ -1.2
HMGB1P1-201ENST00000522557 FOSL1P15407 271 aa7.56□□□□□ -1.2
HMGB1P1-201ENST00000522557 ST13P50502 369 aaKnown RBP7.56□□□□□ -1.2
HMGB1P1-201ENST00000522557 INPP5AQ14642 412 aa7.56□□□□□ -1.2
HMGB1P1-201ENST00000522557 MAP3K11Q16584 847 aa7.56□□□□□ -1.2
HMGB1P1-201ENST00000522557 DUSP27Q5VZP5 1158 aa7.56□□□□□ -1.2
HMGB1P1-201ENST00000522557 OGFOD3Q6PK18 319 aa7.56□□□□□ -1.2
HMGB1P1-201ENST00000522557 DTX1Q86Y01 620 aa7.56□□□□□ -1.2
HMGB1P1-201ENST00000522557 RNF214Q8ND24 703 aa7.56□□□□□ -1.2
HMGB1P1-201ENST00000522557 METTL22Q9BUU2 404 aaPredicted RBP7.56□□□□□ -1.2
HMGB1P1-201ENST00000522557 TGIF2Q9GZN2 237 aa7.56□□□□□ -1.2
HMGB1P1-201ENST00000522557 SSU72Q9NP77 194 aaKnown RBP7.56□□□□□ -1.2
HMGB1P1-201ENST00000522557 ERCC5P28715 1186 aaPredicted RBP7.55□□□□□ -1.2
HMGB1P1-201ENST00000522557 ZNF76P36508 570 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 122.3 ms