RNA–Protein interactions for RNA: ENST00000522552.5

SKP1-209, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SKP1, Length 1,683 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-209ENST00000522552 HDGFL2Q7Z4V5 671 aaPredicted RBP5.06□□□□□ -1.6
SKP1-209ENST00000522552 ZBTB46Q86UZ6 589 aa5.06□□□□□ -1.6
SKP1-209ENST00000522552 FAM178BQ8IXR5 827 aa5.06□□□□□ -1.6
SKP1-209ENST00000522552 C1orf127Q8N9H9 656 aa5.06□□□□□ -1.6
SKP1-209ENST00000522552 TEX19Q8NA77 164 aa5.06□□□□□ -1.6
SKP1-209ENST00000522552 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.06□□□□□ -1.6
SKP1-209ENST00000522552 CNKSR1Q969H4 720 aa5.06□□□□□ -1.6
SKP1-209ENST00000522552 TIFAQ96CG3 184 aa5.06□□□□□ -1.6
SKP1-209ENST00000522552 SLC26A8Q96RN1 970 aa5.06□□□□□ -1.6
SKP1-209ENST00000522552 SPATA9Q9BWV2 254 aa5.06□□□□□ -1.6
SKP1-209ENST00000522552 KRTAP9-2Q9BYQ4 174 aa5.06□□□□□ -1.6
SKP1-209ENST00000522552 RHOBTB2Q9BYZ6 727 aa5.06□□□□□ -1.6
SKP1-209ENST00000522552 OBP2AQ9NY56 170 aa5.06□□□□□ -1.6
SKP1-209ENST00000522552 ZNF69Q9UC07 566 aa5.06□□□□□ -1.6
SKP1-209ENST00000522552 DACH1Q9UI36 760 aa5.06□□□□□ -1.6
SKP1-209ENST00000522552 SETD1BQ9UPS6 1966 aaKnown RBP5.06□□□□□ -1.6
SKP1-209ENST00000522552 TGFBR3LH3BV60 316 aa5.05□□□□□ -1.6
SKP1-209ENST00000522552 AXIN1O15169 862 aa5.05□□□□□ -1.6
SKP1-209ENST00000522552 EPB41L2O43491 1005 aaKnown RBP5.05□□□□□ -1.6
SKP1-209ENST00000522552 TIMM44O43615 452 aa5.05□□□□□ -1.6
SKP1-209ENST00000522552 RFPL1O75677 317 aa5.05□□□□□ -1.6
SKP1-209ENST00000522552 RAPGEF3O95398 923 aa5.05□□□□□ -1.6
SKP1-209ENST00000522552 NBPF7P0C2Y1 421 aaPredicted RBP5.05□□□□□ -1.6
SKP1-209ENST00000522552 CPEP16870 476 aa5.05□□□□□ -1.6
SKP1-209ENST00000522552 HTR3AP46098 478 aa5.05□□□□□ -1.6
SKP1-209ENST00000522552 ZNF165P49910 485 aa5.05□□□□□ -1.6
SKP1-209ENST00000522552 L1TD1Q5T7N2 865 aaKnown RBP5.05□□□□□ -1.6
SKP1-209ENST00000522552 CCDC174Q6PII3 467 aa5.05□□□□□ -1.6
SKP1-209ENST00000522552 BNC2Q6ZN30 1099 aaPredicted RBP5.05□□□□□ -1.6
SKP1-209ENST00000522552 AGMOQ6ZNB7 445 aa5.05□□□□□ -1.6
SKP1-209ENST00000522552 GK5Q6ZS86 529 aa5.05□□□□□ -1.6
SKP1-209ENST00000522552 MORC1Q86VD1 984 aa5.05□□□□□ -1.6
SKP1-209ENST00000522552 LRRTM3Q86VH5 581 aa5.05□□□□□ -1.6
SKP1-209ENST00000522552 TRIM42Q8IWZ5 723 aa5.05□□□□□ -1.6
SKP1-209ENST00000522552 ZBTB38Q8NAP3 1195 aaPredicted RBP5.05□□□□□ -1.6
SKP1-209ENST00000522552 RBBP8NLQ8NC74 664 aaPredicted RBP5.05□□□□□ -1.6
SKP1-209ENST00000522552 WDR66Q8TBY9 1149 aa5.05□□□□□ -1.6
SKP1-209ENST00000522552 KIF2CQ99661 725 aa5.05□□□□□ -1.6
SKP1-209ENST00000522552 ESYT1Q9BSJ8 1104 aa5.05□□□□□ -1.6
SKP1-209ENST00000522552 NCOA5Q9HCD5 579 aaKnown RBP5.05□□□□□ -1.6
SKP1-209ENST00000522552 AAASQ9NRG9 546 aa5.05□□□□□ -1.6
SKP1-209ENST00000522552 LUZP4Q9P127 313 aa5.05□□□□□ -1.6
SKP1-209ENST00000522552 USP25Q9UHP3 1055 aa5.05□□□□□ -1.6
SKP1-209ENST00000522552 KCNMB2Q9Y691 235 aa5.05□□□□□ -1.6
SKP1-209ENST00000522552 DNAJC25-GNG10A0A024R161 153 aa5.05□□□□□ -1.6
SKP1-209ENST00000522552 KRTAP9-6A0A140TA67 174 aa5.05□□□□□ -1.6
SKP1-209ENST00000522552 A0A1W2PP55 124 aa5.05□□□□□ -1.6
SKP1-209ENST00000522552 SLC26A4O43511 780 aa5.05□□□□□ -1.6
SKP1-209ENST00000522552 ABLIM3O94929 683 aa5.05□□□□□ -1.6
SKP1-209ENST00000522552 ADD1P35611 737 aaKnown RBP5.05□□□□□ -1.6
SKP1-209ENST00000522552 TXLNAP40222 546 aa5.05□□□□□ -1.6
SKP1-209ENST00000522552 DGKGP49619 791 aa5.05□□□□□ -1.6
SKP1-209ENST00000522552 VEGFBP49765 207 aa5.05□□□□□ -1.6
SKP1-209ENST00000522552 IDH3AP50213 366 aa5.05□□□□□ -1.6
SKP1-209ENST00000522552 POU5F1Q01860 360 aaKnown RBP5.05□□□□□ -1.6
SKP1-209ENST00000522552 CLCQ05315 142 aa5.05□□□□□ -1.6
SKP1-209ENST00000522552 STRN3Q13033 797 aa5.05□□□□□ -1.6
SKP1-209ENST00000522552 PICALMQ13492 652 aa5.05□□□□□ -1.6
SKP1-209ENST00000522552 KCTD2Q14681 263 aa5.05□□□□□ -1.6
SKP1-209ENST00000522552 CWF19L2Q2TBE0 894 aaKnown RBP5.05□□□□□ -1.6
SKP1-209ENST00000522552 ANO1Q5XXA6 986 aa5.05□□□□□ -1.6
SKP1-209ENST00000522552 TTBK2Q6IQ55 1244 aa5.05□□□□□ -1.6
SKP1-209ENST00000522552 CCDC70Q6NSX1 233 aa5.05□□□□□ -1.6
SKP1-209ENST00000522552 CNNM4Q6P4Q7 775 aa5.05□□□□□ -1.6
SKP1-209ENST00000522552 TREML4Q6UXN2 200 aa5.05□□□□□ -1.6
SKP1-209ENST00000522552 DDX46Q7L014 1031 aaKnown RBP5.05□□□□□ -1.6
SKP1-209ENST00000522552 SMAP1Q8IYB5 467 aaPredicted RBP5.05□□□□□ -1.6
SKP1-209ENST00000522552 ANKRD42Q8N9B4 389 aa5.05□□□□□ -1.6
SKP1-209ENST00000522552 PJA1Q8NG27 643 aa5.05□□□□□ -1.6
SKP1-209ENST00000522552 JPH3Q8WXH2 748 aaPredicted RBP5.05□□□□□ -1.6
SKP1-209ENST00000522552 TRIM52Q96A61 297 aa5.05□□□□□ -1.6
SKP1-209ENST00000522552 CLUHP3Q96NS8 147 aa5.05□□□□□ -1.6
SKP1-209ENST00000522552 CDK15Q96Q40 435 aa5.05□□□□□ -1.6
SKP1-209ENST00000522552 RUSC1Q9BVN2 902 aa5.05□□□□□ -1.6
SKP1-209ENST00000522552 SARGQ9BW04 601 aa5.05□□□□□ -1.6
SKP1-209ENST00000522552 TRIM8Q9BZR9 551 aa5.05□□□□□ -1.6
SKP1-209ENST00000522552 ABCB6Q9NP58 842 aa5.05□□□□□ -1.6
SKP1-209ENST00000522552 LATS2Q9NRM7 1088 aa5.05□□□□□ -1.6
SKP1-209ENST00000522552 UPK3BL1B0FP48 263 aa5.04□□□□□ -1.6
SKP1-209ENST00000522552 UPK3BL2E5RIL1 263 aa5.04□□□□□ -1.6
SKP1-209ENST00000522552 AVPP01185 164 aa5.04□□□□□ -1.6
SKP1-209ENST00000522552 SRGNP10124 158 aa5.04□□□□□ -1.6
SKP1-209ENST00000522552 IMPDH2P12268 514 aa5.04□□□□□ -1.6
SKP1-209ENST00000522552 BMP1P13497 986 aa5.04□□□□□ -1.6
SKP1-209ENST00000522552 ZSCAN20P17040 1043 aaPredicted RBP5.04□□□□□ -1.6
SKP1-209ENST00000522552 L1CAMP32004 1257 aa5.04□□□□□ -1.6
SKP1-209ENST00000522552 COPB2P35606 906 aa5.04□□□□□ -1.6
SKP1-209ENST00000522552 GRM5P41594 1212 aa5.04□□□□□ -1.6
SKP1-209ENST00000522552 DHX9Q08211 1270 aaKnown RBP5.04□□□□□ -1.6
SKP1-209ENST00000522552 TCIRG1Q13488 830 aa5.04□□□□□ -1.6
SKP1-209ENST00000522552 ALFQ53S48 1182 aa5.04□□□□□ -1.6
SKP1-209ENST00000522552 ZC3H12BQ5HYM0 836 aaKnown RBP5.04□□□□□ -1.6
SKP1-209ENST00000522552 RNF219Q5W0B1 726 aaPredicted RBP5.04□□□□□ -1.6
SKP1-209ENST00000522552 ICE2Q659A1 982 aa5.04□□□□□ -1.6
SKP1-209ENST00000522552 DTHD1Q6ZMT9 781 aa5.04□□□□□ -1.6
SKP1-209ENST00000522552 RUFY4Q6ZNE9 571 aa5.04□□□□□ -1.6
SKP1-209ENST00000522552 EEPD1Q7L9B9 569 aa5.04□□□□□ -1.6
SKP1-209ENST00000522552 CPXCR1Q8N123 301 aa5.04□□□□□ -1.6
SKP1-209ENST00000522552 REXO1Q8N1G1 1221 aaKnown RBP5.04□□□□□ -1.6
SKP1-209ENST00000522552 CMTR1Q8N1G2 835 aaKnown RBP5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms