RNA–Protein interactions for RNA: ENST00000520451.1

CSMD1-207, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 2

Gene CSMD1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-207ENST00000520451 PI16Q6UXB8 463 aa18.72■□□□□ 0.59
CSMD1-207ENST00000520451 SH3BP5LQ7L8J4 393 aa18.72■□□□□ 0.59
CSMD1-207ENST00000520451 TMEM57Q8N5G2 664 aa18.72■□□□□ 0.59
CSMD1-207ENST00000520451 SPATA5Q8NB90 893 aa18.72■□□□□ 0.59
CSMD1-207ENST00000520451 ZNF333Q96JL9 665 aa18.72■□□□□ 0.59
CSMD1-207ENST00000520451 DDX4Q9NQI0 724 aaKnown RBP18.72■□□□□ 0.59
CSMD1-207ENST00000520451 PICK1Q9NRD5 415 aa18.72■□□□□ 0.59
CSMD1-207ENST00000520451 CPA4Q9UI42 421 aa18.72■□□□□ 0.59
CSMD1-207ENST00000520451 DOCK2Q92608 1830 aa18.72■□□□□ 0.59
CSMD1-207ENST00000520451 DDTLA6NHG4 134 aaPredicted RBP18.71■□□□□ 0.59
CSMD1-207ENST00000520451 MOGSQ13724 837 aa18.71■□□□□ 0.59
CSMD1-207ENST00000520451 C17orf99Q6UX52 265 aa18.71■□□□□ 0.59
CSMD1-207ENST00000520451 NBPF11Q86T75 865 aa18.71■□□□□ 0.59
CSMD1-207ENST00000520451 SCYL3Q8IZE3 742 aa18.71■□□□□ 0.59
CSMD1-207ENST00000520451 GPR75-ASB3A0A0A6YYF3 556 aa18.7■□□□□ 0.58
CSMD1-207ENST00000520451 CXCL11O14625 94 aa18.7■□□□□ 0.58
CSMD1-207ENST00000520451 ECM2O94769 699 aaPredicted RBP18.7■□□□□ 0.58
CSMD1-207ENST00000520451 ARID4AP29374 1257 aaPredicted RBP18.7■□□□□ 0.58
CSMD1-207ENST00000520451 HNRNPUQ00839 825 aaKnown RBP eCLIP18.7■□□□□ 0.58
CSMD1-207ENST00000520451 TBC1D9Q6ZT07 1266 aa18.7■□□□□ 0.58
CSMD1-207ENST00000520451 ZNF384Q8TF68 577 aa18.7■□□□□ 0.58
CSMD1-207ENST00000520451 TMEM106CQ9BVX2 250 aa18.7■□□□□ 0.58
CSMD1-207ENST00000520451 KIAA0100Q14667 2235 aaKnown RBP18.7■□□□□ 0.58
CSMD1-207ENST00000520451 ZSWIM8A7E2V4 1837 aa18.7■□□□□ 0.58
CSMD1-207ENST00000520451 RBBP6Q7Z6E9 1792 aaKnown RBP18.69■□□□□ 0.58
CSMD1-207ENST00000520451 SLURP2P0DP57 97 aa18.69■□□□□ 0.58
CSMD1-207ENST00000520451 PTPRAP18433 802 aa18.69■□□□□ 0.58
CSMD1-207ENST00000520451 EN2P19622 333 aaPredicted RBP18.69■□□□□ 0.58
CSMD1-207ENST00000520451 RHBDL3P58872 404 aa18.69■□□□□ 0.58
CSMD1-207ENST00000520451 GSTO1P78417 241 aa18.69■□□□□ 0.58
CSMD1-207ENST00000520451 NSUN4Q96CB9 384 aaKnown RBP18.69■□□□□ 0.58
CSMD1-207ENST00000520451 RAI14Q9P0K7 980 aa18.69■□□□□ 0.58
CSMD1-207ENST00000520451 ZHX2Q9Y6X8 837 aa18.69■□□□□ 0.58
CSMD1-207ENST00000520451 ADGRA2Q96PE1 1338 aa18.69■□□□□ 0.58
CSMD1-207ENST00000520451 MYCP01106 439 aaPredicted RBP18.68■□□□□ 0.58
CSMD1-207ENST00000520451 GNRH1P01148 92 aa18.68■□□□□ 0.58
CSMD1-207ENST00000520451 LDHCP07864 332 aa18.68■□□□□ 0.58
CSMD1-207ENST00000520451 UQCRFS1P1P0C7P4 283 aa18.68■□□□□ 0.58
CSMD1-207ENST00000520451 MCAMP43121 646 aa18.68■□□□□ 0.58
CSMD1-207ENST00000520451 MAP3K10Q02779 954 aa18.68■□□□□ 0.58
CSMD1-207ENST00000520451 OS9Q13438 667 aaPredicted RBP18.68■□□□□ 0.58
CSMD1-207ENST00000520451 PARK7Q99497 189 aaKnown RBP18.68■□□□□ 0.58
CSMD1-207ENST00000520451 A0A0G2JLL6 359 aaPredicted RBP18.67■□□□□ 0.58
CSMD1-207ENST00000520451 PSMC4P43686 418 aa18.67■□□□□ 0.58
CSMD1-207ENST00000520451 PRMT2P55345 433 aa18.67■□□□□ 0.58
CSMD1-207ENST00000520451 POLA2Q14181 598 aa18.67■□□□□ 0.58
CSMD1-207ENST00000520451 SLC4A8Q2Y0W8 1093 aa18.67■□□□□ 0.58
CSMD1-207ENST00000520451 GPAT2Q6NUI2 795 aa18.67■□□□□ 0.58
CSMD1-207ENST00000520451 PRRT2Q7Z6L0 340 aaPredicted RBP18.67■□□□□ 0.58
CSMD1-207ENST00000520451 FTSJ3Q8IY81 847 aaKnown RBP18.67■□□□□ 0.58
CSMD1-207ENST00000520451 SH3TC2Q8TF17 1288 aa18.67■□□□□ 0.58
CSMD1-207ENST00000520451 LRP2BPQ9P2M1 347 aa18.67■□□□□ 0.58
CSMD1-207ENST00000520451 CTNND1O60716 968 aaKnown RBP18.66■□□□□ 0.58
CSMD1-207ENST00000520451 NPM3O75607 178 aaKnown RBP18.66■□□□□ 0.58
CSMD1-207ENST00000520451 FMNL1O95466 1100 aaPredicted RBP18.66■□□□□ 0.58
CSMD1-207ENST00000520451 MAP4K4O95819 1239 aaPredicted RBP18.66■□□□□ 0.58
CSMD1-207ENST00000520451 CYP2C8P10632 490 aa18.66■□□□□ 0.58
CSMD1-207ENST00000520451 CTGFP29279 349 aa18.66■□□□□ 0.58
CSMD1-207ENST00000520451 GADL1Q6ZQY3 521 aa18.66■□□□□ 0.58
CSMD1-207ENST00000520451 FASTKD5Q7L8L6 764 aaKnown RBP18.66■□□□□ 0.58
CSMD1-207ENST00000520451 TRIM47Q96LD4 638 aa18.66■□□□□ 0.58
CSMD1-207ENST00000520451 C1orf115Q9H7X2 142 aa18.66■□□□□ 0.58
CSMD1-207ENST00000520451 AFG3L2Q9Y4W6 797 aa18.66■□□□□ 0.58
CSMD1-207ENST00000520451 ATP8B2P98198 1209 aa18.65■□□□□ 0.58
CSMD1-207ENST00000520451 TNNI3KQ59H18 835 aa18.65■□□□□ 0.58
CSMD1-207ENST00000520451 TTC39AQ5SRH9 613 aa18.65■□□□□ 0.58
CSMD1-207ENST00000520451 ITPRIPQ8IWB1 547 aa18.65■□□□□ 0.58
CSMD1-207ENST00000520451 MIER1Q8N108 512 aa18.65■□□□□ 0.58
CSMD1-207ENST00000520451 SSH3Q8TE77 659 aa18.65■□□□□ 0.58
CSMD1-207ENST00000520451 GPR108Q9NPR9 543 aa18.65■□□□□ 0.58
CSMD1-207ENST00000520451 SNRKQ9NRH2 765 aa18.65■□□□□ 0.58
CSMD1-207ENST00000520451 FRMD4AQ9P2Q2 1039 aaPredicted RBP18.65■□□□□ 0.58
CSMD1-207ENST00000520451 SRRDQ9UH36 339 aa18.65■□□□□ 0.58
CSMD1-207ENST00000520451 FPGT-TNNI3KV9GXZ4 949 aa18.65■□□□□ 0.58
CSMD1-207ENST00000520451 FAM196BA6NMK8 535 aa18.64■□□□□ 0.57
CSMD1-207ENST00000520451 TBC1D12O60347 775 aa18.64■□□□□ 0.57
CSMD1-207ENST00000520451 SURF6O75683 361 aaKnown RBP18.64■□□□□ 0.57
CSMD1-207ENST00000520451 OSBPP22059 807 aa18.64■□□□□ 0.57
CSMD1-207ENST00000520451 HOXD10P28358 340 aa18.64■□□□□ 0.57
CSMD1-207ENST00000520451 TEX11Q8IYF3 940 aa18.64■□□□□ 0.57
CSMD1-207ENST00000520451 DBNDD2Q9BQY9 259 aa18.64■□□□□ 0.57
CSMD1-207ENST00000520451 OSBPL5Q9H0X9 879 aaPredicted RBP18.64■□□□□ 0.57
CSMD1-207ENST00000520451 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.64■□□□□ 0.57
CSMD1-207ENST00000520451 DOCK1Q14185 1865 aa18.64■□□□□ 0.57
CSMD1-207ENST00000520451 TRIM75PA6NK02 468 aa18.63■□□□□ 0.57
CSMD1-207ENST00000520451 BCRP11274 1271 aa18.63■□□□□ 0.57
CSMD1-207ENST00000520451 CCDC158Q5M9N0 1113 aa18.63■□□□□ 0.57
CSMD1-207ENST00000520451 CCDC84Q86UT8 332 aaPredicted RBP18.63■□□□□ 0.57
CSMD1-207ENST00000520451 RAET1EQ8TD07 263 aa18.63■□□□□ 0.57
CSMD1-207ENST00000520451 NOL10Q9BSC4 688 aaKnown RBP18.63■□□□□ 0.57
CSMD1-207ENST00000520451 COL2A1P02458 1487 aaPredicted RBP18.63■□□□□ 0.57
CSMD1-207ENST00000520451 RLBP1P12271 317 aa18.62■□□□□ 0.57
CSMD1-207ENST00000520451 NAA16Q6N069 864 aaPredicted RBP18.62■□□□□ 0.57
CSMD1-207ENST00000520451 SH3RF3Q8TEJ3 882 aaPredicted RBP18.62■□□□□ 0.57
CSMD1-207ENST00000520451 SLC45A1Q9Y2W3 748 aa18.62■□□□□ 0.57
CSMD1-207ENST00000520451 MYPNQ86TC9 1320 aa18.62■□□□□ 0.57
CSMD1-207ENST00000520451 FCGRTP55899 365 aa18.61■□□□□ 0.57
CSMD1-207ENST00000520451 AATFQ9NY61 560 aaKnown RBP eCLIP18.61■□□□□ 0.57
CSMD1-207ENST00000520451 ZBTB7BO15156 539 aaPredicted RBP18.6■□□□□ 0.57
CSMD1-207ENST00000520451 BAG3O95817 575 aa18.6■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms