RNA–Protein interactions for RNA: ENST00000515585.1

ABCC3-216, Transcript of ATP binding cassette subfamily C member 3, humanhuman

TSL 3

Gene ABCC3, Length 484 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC3-216ENST00000515585 APPP05067 770 aa16.36■□□□□ 0.21
ABCC3-216ENST00000515585 ST3GAL1Q11201 340 aa16.36■□□□□ 0.21
ABCC3-216ENST00000515585 ANKRD1Q15327 319 aa16.36■□□□□ 0.21
ABCC3-216ENST00000515585 USP17L1Q7RTZ2 530 aa16.36■□□□□ 0.21
ABCC3-216ENST00000515585 ZSCAN31Q96LW9 406 aaPredicted RBP16.36■□□□□ 0.21
ABCC3-216ENST00000515585 BCS1LQ9Y276 419 aa16.36■□□□□ 0.21
ABCC3-216ENST00000515585 BAG3O95817 575 aa16.35■□□□□ 0.21
ABCC3-216ENST00000515585 HSPA1AP0DMV8 641 aaKnown RBP16.35■□□□□ 0.21
ABCC3-216ENST00000515585 HSPA1BP0DMV9 641 aaKnown RBP16.35■□□□□ 0.21
ABCC3-216ENST00000515585 BTDP43251 543 aa16.35■□□□□ 0.21
ABCC3-216ENST00000515585 PPARAQ07869 468 aa16.35■□□□□ 0.21
ABCC3-216ENST00000515585 AKNAD1Q5T1N1 836 aa16.35■□□□□ 0.21
ABCC3-216ENST00000515585 CTR9Q6PD62 1173 aa16.35■□□□□ 0.21
ABCC3-216ENST00000515585 NCOA7Q8NI08 942 aa16.35■□□□□ 0.21
ABCC3-216ENST00000515585 SH3RF3Q8TEJ3 882 aaPredicted RBP16.35■□□□□ 0.21
ABCC3-216ENST00000515585 GMLQ99445 158 aa16.35■□□□□ 0.21
ABCC3-216ENST00000515585 MXD3Q9BW11 206 aa16.35■□□□□ 0.21
ABCC3-216ENST00000515585 TPCN1Q9ULQ1 816 aa16.35■□□□□ 0.21
ABCC3-216ENST00000515585 CIZ1Q9ULV3 898 aaPredicted RBP16.35■□□□□ 0.21
ABCC3-216ENST00000515585 NEDD4P46934 1319 aa16.35■□□□□ 0.21
ABCC3-216ENST00000515585 MYH8P13535 1937 aa16.35■□□□□ 0.21
ABCC3-216ENST00000515585 PLCG2P16885 1265 aa16.34■□□□□ 0.21
ABCC3-216ENST00000515585 IARSP41252 1262 aaKnown RBP16.34■□□□□ 0.21
ABCC3-216ENST00000515585 TDO2P48775 406 aa16.34■□□□□ 0.21
ABCC3-216ENST00000515585 TCEANC2Q96MN5 208 aa16.34■□□□□ 0.21
ABCC3-216ENST00000515585 MTA3Q9BTC8 594 aa16.34■□□□□ 0.21
ABCC3-216ENST00000515585 SH2B1Q9NRF2 756 aaPredicted RBP16.34■□□□□ 0.21
ABCC3-216ENST00000515585 ZNF277Q9NRM2 450 aaPredicted RBP16.34■□□□□ 0.21
ABCC3-216ENST00000515585 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.34■□□□□ 0.21
ABCC3-216ENST00000515585 VIL1P09327 827 aaKnown RBP16.33■□□□□ 0.2
ABCC3-216ENST00000515585 PCP11498 1178 aaKnown RBP16.33■□□□□ 0.2
ABCC3-216ENST00000515585 CTDSPL2Q05D32 466 aa16.33■□□□□ 0.2
ABCC3-216ENST00000515585 ME3Q16798 604 aa16.33■□□□□ 0.2
ABCC3-216ENST00000515585 C9orf131Q5VYM1 1079 aa16.33■□□□□ 0.2
ABCC3-216ENST00000515585 Q6ZUG5 572 aa16.33■□□□□ 0.2
ABCC3-216ENST00000515585 ZDHHC15Q96MV8 337 aa16.33■□□□□ 0.2
ABCC3-216ENST00000515585 TAOK3Q9H2K8 898 aa16.33■□□□□ 0.2
ABCC3-216ENST00000515585 ARPP21Q9UBL0 812 aaPredicted RBP16.33■□□□□ 0.2
ABCC3-216ENST00000515585 TTF2Q9UNY4 1162 aaKnown RBP16.33■□□□□ 0.2
ABCC3-216ENST00000515585 GREB1LQ9C091 1923 aaPredicted RBP16.33■□□□□ 0.2
ABCC3-216ENST00000515585 USP17L12C9JPN9 530 aa16.32■□□□□ 0.2
ABCC3-216ENST00000515585 USP17L21D6R901 530 aa16.32■□□□□ 0.2
ABCC3-216ENST00000515585 G3V3G9 751 aa16.32■□□□□ 0.2
ABCC3-216ENST00000515585 SMIM22K7EJ46 135 aa16.32■□□□□ 0.2
ABCC3-216ENST00000515585 MCM5P33992 734 aa16.32■□□□□ 0.2
ABCC3-216ENST00000515585 DCAF8Q5TAQ9 597 aa16.32■□□□□ 0.2
ABCC3-216ENST00000515585 APOBEC3HQ6NTF7 200 aaKnown RBP16.32■□□□□ 0.2
ABCC3-216ENST00000515585 CYB5R4Q7L1T6 521 aa16.32■□□□□ 0.2
ABCC3-216ENST00000515585 MYO3BQ8WXR4 1341 aa16.32■□□□□ 0.2
ABCC3-216ENST00000515585 WDR90Q96KV7 1748 aa16.32■□□□□ 0.2
ABCC3-216ENST00000515585 CNNM2Q9H8M5 875 aa16.32■□□□□ 0.2
ABCC3-216ENST00000515585 RRAGCQ9HB90 399 aa16.32■□□□□ 0.2
ABCC3-216ENST00000515585 CWC22Q9HCG8 908 aaKnown RBP16.32■□□□□ 0.2
ABCC3-216ENST00000515585 ORC4O43929 436 aa16.31■□□□□ 0.2
ABCC3-216ENST00000515585 NT5C2P49902 561 aa16.31■□□□□ 0.2
ABCC3-216ENST00000515585 C12orf60Q5U649 245 aa16.31■□□□□ 0.2
ABCC3-216ENST00000515585 LARGE2Q8N3Y3 721 aa16.31■□□□□ 0.2
ABCC3-216ENST00000515585 TEKT1Q969V4 418 aa16.31■□□□□ 0.2
ABCC3-216ENST00000515585 NOL10Q9BSC4 688 aaKnown RBP16.31■□□□□ 0.2
ABCC3-216ENST00000515585 KRT23Q9C075 422 aa16.31■□□□□ 0.2
ABCC3-216ENST00000515585 SLKQ9H2G2 1235 aaPredicted RBP16.31■□□□□ 0.2
ABCC3-216ENST00000515585 RNF41Q9H4P4 317 aaPredicted RBP16.31■□□□□ 0.2
ABCC3-216ENST00000515585 CHMP5Q9NZZ3 219 aa16.31■□□□□ 0.2
ABCC3-216ENST00000515585 SERPINA10Q9UK55 444 aa16.31■□□□□ 0.2
ABCC3-216ENST00000515585 ZNRF3Q9ULT6 936 aa16.31■□□□□ 0.2
ABCC3-216ENST00000515585 COL2A1P02458 1487 aaPredicted RBP16.3■□□□□ 0.2
ABCC3-216ENST00000515585 FLT1P17948 1338 aa16.3■□□□□ 0.2
ABCC3-216ENST00000515585 B4E1Z4 1266 aa16.3■□□□□ 0.2
ABCC3-216ENST00000515585 PRC1O43663 620 aa16.3■□□□□ 0.2
ABCC3-216ENST00000515585 NPM3O75607 178 aaKnown RBP16.3■□□□□ 0.2
ABCC3-216ENST00000515585 WDHD1O75717 1129 aaPredicted RBP16.3■□□□□ 0.2
ABCC3-216ENST00000515585 CRKP46108 304 aa16.3■□□□□ 0.2
ABCC3-216ENST00000515585 RSBN1LQ6PCB5 846 aaPredicted RBP16.3■□□□□ 0.2
ABCC3-216ENST00000515585 MFSD6Q6ZSS7 791 aa16.3■□□□□ 0.2
ABCC3-216ENST00000515585 IGDCC4Q8TDY8 1250 aa16.3■□□□□ 0.2
ABCC3-216ENST00000515585 INCENPQ9NQS7 918 aa16.3■□□□□ 0.2
ABCC3-216ENST00000515585 NID2Q14112 1375 aa16.29■□□□□ 0.2
ABCC3-216ENST00000515585 CYP2D7A0A087X1C5 515 aa16.29■□□□□ 0.2
ABCC3-216ENST00000515585 PSMD14O00487 310 aa16.29■□□□□ 0.2
ABCC3-216ENST00000515585 SH2B2O14492 632 aaPredicted RBP16.29■□□□□ 0.2
ABCC3-216ENST00000515585 PFKFB2O60825 505 aa16.29■□□□□ 0.2
ABCC3-216ENST00000515585 EVX2Q03828 476 aa16.29■□□□□ 0.2
ABCC3-216ENST00000515585 TRDNQ13061 729 aa16.29■□□□□ 0.2
ABCC3-216ENST00000515585 CDC42EP5Q6NZY7 148 aa16.29■□□□□ 0.2
ABCC3-216ENST00000515585 NOL8Q76FK4 1167 aaKnown RBP16.29■□□□□ 0.2
ABCC3-216ENST00000515585 RALYLQ86SE5 291 aaKnown RBP16.29■□□□□ 0.2
ABCC3-216ENST00000515585 SGMS1Q86VZ5 419 aa16.29■□□□□ 0.2
ABCC3-216ENST00000515585 TEX11Q8IYF3 940 aa16.29■□□□□ 0.2
ABCC3-216ENST00000515585 SPRYD3Q8NCJ5 442 aa16.29■□□□□ 0.2
ABCC3-216ENST00000515585 SMC1BQ8NDV3 1235 aa16.29■□□□□ 0.2
ABCC3-216ENST00000515585 BRF1Q92994 677 aa16.29■□□□□ 0.2
ABCC3-216ENST00000515585 ZNF274Q96GC6 653 aaPredicted RBP16.29■□□□□ 0.2
ABCC3-216ENST00000515585 TMEM87BQ96K49 555 aa16.29■□□□□ 0.2
ABCC3-216ENST00000515585 LARP6Q9BRS8 491 aaKnown RBP16.29■□□□□ 0.2
ABCC3-216ENST00000515585 LRRC2Q9BYS8 371 aa16.29■□□□□ 0.2
ABCC3-216ENST00000515585 USP17L8P0C7I0 530 aa16.28■□□□□ 0.2
ABCC3-216ENST00000515585 CYP2D6P10635 497 aa16.28■□□□□ 0.2
ABCC3-216ENST00000515585 NIM1KQ8IY84 436 aa16.28■□□□□ 0.2
ABCC3-216ENST00000515585 TGFBRAP1Q8WUH2 860 aa16.28■□□□□ 0.2
ABCC3-216ENST00000515585 GTF3C6Q969F1 213 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms