RNA–Protein interactions for RNA: ENST00000514611.1

PFDN1-206, Transcript of prefoldin subunit 1, humanhuman

TSL 2

Gene PFDN1, Length 1,139 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-206ENST00000514611 ITPRIPQ8IWB1 547 aa16.42■□□□□ 0.22
PFDN1-206ENST00000514611 ZSCAN29Q8IWY8 852 aaPredicted RBP16.42■□□□□ 0.22
PFDN1-206ENST00000514611 SLF2Q8IX21 1173 aa16.42■□□□□ 0.22
PFDN1-206ENST00000514611 ARHGAP39Q9C0H5 1083 aa16.42■□□□□ 0.22
PFDN1-206ENST00000514611 ZCCHC17Q9NP64 241 aaKnown RBP16.42■□□□□ 0.22
PFDN1-206ENST00000514611 KCNH4Q9UQ05 1017 aa16.42■□□□□ 0.22
PFDN1-206ENST00000514611 ZSWIM8A7E2V4 1837 aa16.42■□□□□ 0.22
PFDN1-206ENST00000514611 POTEFA5A3E0 1075 aa16.41■□□□□ 0.22
PFDN1-206ENST00000514611 PHF20L1A8MW92 1017 aa16.41■□□□□ 0.22
PFDN1-206ENST00000514611 ECM2O94769 699 aaPredicted RBP16.41■□□□□ 0.22
PFDN1-206ENST00000514611 RHBDL3P58872 404 aa16.41■□□□□ 0.22
PFDN1-206ENST00000514611 MOGSQ13724 837 aa16.41■□□□□ 0.22
PFDN1-206ENST00000514611 SSH3Q8TE77 659 aa16.41■□□□□ 0.22
PFDN1-206ENST00000514611 NSUN4Q96CB9 384 aaKnown RBP16.41■□□□□ 0.22
PFDN1-206ENST00000514611 PTCH2Q9Y6C5 1203 aa16.41■□□□□ 0.22
PFDN1-206ENST00000514611 GPR75-ASB3A0A0A6YYF3 556 aa16.4■□□□□ 0.22
PFDN1-206ENST00000514611 OS9Q13438 667 aaPredicted RBP16.4■□□□□ 0.22
PFDN1-206ENST00000514611 TNNI3KQ59H18 835 aa16.4■□□□□ 0.22
PFDN1-206ENST00000514611 SCYL3Q8IZE3 742 aa16.4■□□□□ 0.22
PFDN1-206ENST00000514611 ARMC5Q96C12 935 aa16.4■□□□□ 0.22
PFDN1-206ENST00000514611 DBNDD2Q9BQY9 259 aa16.4■□□□□ 0.22
PFDN1-206ENST00000514611 RAI14Q9P0K7 980 aa16.4■□□□□ 0.22
PFDN1-206ENST00000514611 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.4■□□□□ 0.22
PFDN1-206ENST00000514611 FPGT-TNNI3KV9GXZ4 949 aa16.4■□□□□ 0.22
PFDN1-206ENST00000514611 ZBED9Q6R2W3 1325 aa16.4■□□□□ 0.22
PFDN1-206ENST00000514611 FAM196BA6NMK8 535 aa16.39■□□□□ 0.21
PFDN1-206ENST00000514611 PDHXO00330 501 aa16.39■□□□□ 0.21
PFDN1-206ENST00000514611 LACTBP83111 547 aaPredicted RBP16.39■□□□□ 0.21
PFDN1-206ENST00000514611 ATP8B2P98198 1209 aa16.39■□□□□ 0.21
PFDN1-206ENST00000514611 ANKRD23Q86SG2 305 aa16.39■□□□□ 0.21
PFDN1-206ENST00000514611 SNRKQ9NRH2 765 aa16.39■□□□□ 0.21
PFDN1-206ENST00000514611 CPA4Q9UI42 421 aa16.39■□□□□ 0.21
PFDN1-206ENST00000514611 ADGRA2Q96PE1 1338 aa16.39■□□□□ 0.21
PFDN1-206ENST00000514611 AK9Q5TCS8 1911 aa16.39■□□□□ 0.21
PFDN1-206ENST00000514611 ZBTB7BO15156 539 aaPredicted RBP16.38■□□□□ 0.21
PFDN1-206ENST00000514611 SURF6O75683 361 aaKnown RBP16.38■□□□□ 0.21
PFDN1-206ENST00000514611 UQCRFS1P1P0C7P4 283 aa16.38■□□□□ 0.21
PFDN1-206ENST00000514611 PTPRAP18433 802 aa16.38■□□□□ 0.21
PFDN1-206ENST00000514611 TTC39AQ5SRH9 613 aa16.38■□□□□ 0.21
PFDN1-206ENST00000514611 CCDC84Q86UT8 332 aaPredicted RBP16.38■□□□□ 0.21
PFDN1-206ENST00000514611 PICK1Q9NRD5 415 aa16.38■□□□□ 0.21
PFDN1-206ENST00000514611 MAST2Q6P0Q8 1798 aa16.37■□□□□ 0.21
PFDN1-206ENST00000514611 CTGFP29279 349 aa16.37■□□□□ 0.21
PFDN1-206ENST00000514611 GSTO1P78417 241 aa16.37■□□□□ 0.21
PFDN1-206ENST00000514611 MAP3K10Q02779 954 aa16.37■□□□□ 0.21
PFDN1-206ENST00000514611 GPAT2Q6NUI2 795 aa16.37■□□□□ 0.21
PFDN1-206ENST00000514611 C17orf99Q6UX52 265 aa16.37■□□□□ 0.21
PFDN1-206ENST00000514611 ZNF333Q96JL9 665 aa16.37■□□□□ 0.21
PFDN1-206ENST00000514611 GPR108Q9NPR9 543 aa16.37■□□□□ 0.21
PFDN1-206ENST00000514611 TLR7Q9NYK1 1049 aaKnown RBP16.37■□□□□ 0.21
PFDN1-206ENST00000514611 LRP2BPQ9P2M1 347 aa16.37■□□□□ 0.21
PFDN1-206ENST00000514611 ZHX2Q9Y6X8 837 aa16.37■□□□□ 0.21
PFDN1-206ENST00000514611 A0A0G2JLL6 359 aaPredicted RBP16.36■□□□□ 0.21
PFDN1-206ENST00000514611 CYP2C8P10632 490 aa16.36■□□□□ 0.21
PFDN1-206ENST00000514611 ARHGEF6Q15052 776 aa16.36■□□□□ 0.21
PFDN1-206ENST00000514611 SLC9C1Q4G0N8 1177 aa16.36■□□□□ 0.21
PFDN1-206ENST00000514611 PRRT2Q7Z6L0 340 aaPredicted RBP16.36■□□□□ 0.21
PFDN1-206ENST00000514611 PANK1Q8TE04 598 aa16.36■□□□□ 0.21
PFDN1-206ENST00000514611 OSBPL5Q9H0X9 879 aaPredicted RBP16.36■□□□□ 0.21
PFDN1-206ENST00000514611 DBNLQ9UJU6 430 aaKnown RBP16.36■□□□□ 0.21
PFDN1-206ENST00000514611 DOCK1Q14185 1865 aa16.35■□□□□ 0.21
PFDN1-206ENST00000514611 CXCL11O14625 94 aa16.35■□□□□ 0.21
PFDN1-206ENST00000514611 MYCP01106 439 aaPredicted RBP16.35■□□□□ 0.21
PFDN1-206ENST00000514611 CYP2E1P05181 493 aaPredicted RBP16.35■□□□□ 0.21
PFDN1-206ENST00000514611 LDHCP07864 332 aa16.35■□□□□ 0.21
PFDN1-206ENST00000514611 KIF22Q14807 665 aa16.35■□□□□ 0.21
PFDN1-206ENST00000514611 CCDC158Q5M9N0 1113 aa16.35■□□□□ 0.21
PFDN1-206ENST00000514611 CEP85Q6P2H3 762 aa16.35■□□□□ 0.21
PFDN1-206ENST00000514611 TEX11Q8IYF3 940 aa16.35■□□□□ 0.21
PFDN1-206ENST00000514611 SH3RF3Q8TEJ3 882 aaPredicted RBP16.35■□□□□ 0.21
PFDN1-206ENST00000514611 SH3TC2Q8TF17 1288 aa16.35■□□□□ 0.21
PFDN1-206ENST00000514611 PARK7Q99497 189 aaKnown RBP16.35■□□□□ 0.21
PFDN1-206ENST00000514611 AATFQ9NY61 560 aaKnown RBP eCLIP16.35■□□□□ 0.21
PFDN1-206ENST00000514611 NOP58Q9Y2X3 529 aaKnown RBP16.35■□□□□ 0.21
PFDN1-206ENST00000514611 AFG3L2Q9Y4W6 797 aa16.35■□□□□ 0.21
PFDN1-206ENST00000514611 COL2A1P02458 1487 aaPredicted RBP16.35■□□□□ 0.21
PFDN1-206ENST00000514611 RBBP6Q7Z6E9 1792 aaKnown RBP16.34■□□□□ 0.21
PFDN1-206ENST00000514611 TRIM75PA6NK02 468 aa16.34■□□□□ 0.21
PFDN1-206ENST00000514611 CTNND1O60716 968 aaKnown RBP16.34■□□□□ 0.21
PFDN1-206ENST00000514611 NPM3O75607 178 aaKnown RBP16.34■□□□□ 0.21
PFDN1-206ENST00000514611 EN2P19622 333 aaPredicted RBP16.34■□□□□ 0.21
PFDN1-206ENST00000514611 ZAP70P43403 619 aa16.34■□□□□ 0.21
PFDN1-206ENST00000514611 PRPF38BQ5VTL8 546 aaKnown RBP16.34■□□□□ 0.21
PFDN1-206ENST00000514611 NAA16Q6N069 864 aaPredicted RBP16.34■□□□□ 0.21
PFDN1-206ENST00000514611 GADL1Q6ZQY3 521 aa16.34■□□□□ 0.21
PFDN1-206ENST00000514611 ADGRA1Q86SQ6 560 aa16.34■□□□□ 0.21
PFDN1-206ENST00000514611 TRIM47Q96LD4 638 aa16.34■□□□□ 0.21
PFDN1-206ENST00000514611 CCDC8Q9H0W5 538 aaPredicted RBP16.34■□□□□ 0.21
PFDN1-206ENST00000514611 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.34■□□□□ 0.21
PFDN1-206ENST00000514611 PSMC4P43686 418 aa16.33■□□□□ 0.2
PFDN1-206ENST00000514611 EAF2Q96CJ1 260 aaPredicted RBP16.33■□□□□ 0.2
PFDN1-206ENST00000514611 PIH1D3Q9NQM4 214 aaKnown RBP16.33■□□□□ 0.2
PFDN1-206ENST00000514611 TBC1D12O60347 775 aa16.32■□□□□ 0.2
PFDN1-206ENST00000514611 SLC34A2O95436 690 aa16.32■□□□□ 0.2
PFDN1-206ENST00000514611 MAP4K4O95819 1239 aaPredicted RBP16.32■□□□□ 0.2
PFDN1-206ENST00000514611 BCRP11274 1271 aa16.32■□□□□ 0.2
PFDN1-206ENST00000514611 OSBPP22059 807 aa16.32■□□□□ 0.2
PFDN1-206ENST00000514611 RRP1BQ14684 758 aaKnown RBP16.32■□□□□ 0.2
PFDN1-206ENST00000514611 PHIPQ8WWQ0 1821 aa16.32■□□□□ 0.2
PFDN1-206ENST00000514611 NOL10Q9BSC4 688 aaKnown RBP16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms