RNA–Protein interactions for RNA: ENST00000511667.5

CLDND1-224, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 871 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-224ENST00000511667 UQCRFS1P1P0C7P4 283 aa16.59■□□□□ 0.25
CLDND1-224ENST00000511667 RHBDL3P58872 404 aa16.59■□□□□ 0.25
CLDND1-224ENST00000511667 MAP3K9P80192 1104 aa16.59■□□□□ 0.25
CLDND1-224ENST00000511667 MECOMQ03112 1051 aa16.59■□□□□ 0.25
CLDND1-224ENST00000511667 VGLL4Q14135 290 aa16.59■□□□□ 0.25
CLDND1-224ENST00000511667 PDE3AQ14432 1141 aa16.59■□□□□ 0.25
CLDND1-224ENST00000511667 EAF2Q96CJ1 260 aaPredicted RBP16.59■□□□□ 0.25
CLDND1-224ENST00000511667 DBNDD2Q9BQY9 259 aa16.59■□□□□ 0.25
CLDND1-224ENST00000511667 DBNLQ9UJU6 430 aaKnown RBP16.59■□□□□ 0.25
CLDND1-224ENST00000511667 DDX19BQ9UMR2 479 aa16.59■□□□□ 0.25
CLDND1-224ENST00000511667 ENTPD3O75355 529 aa16.58■□□□□ 0.24
CLDND1-224ENST00000511667 MAP4K4O95819 1239 aaPredicted RBP16.58■□□□□ 0.24
CLDND1-224ENST00000511667 CRHR2Q13324 411 aa16.58■□□□□ 0.24
CLDND1-224ENST00000511667 RPAP2Q8IXW5 612 aaPredicted RBP16.58■□□□□ 0.24
CLDND1-224ENST00000511667 HOOK2Q96ED9 719 aa16.58■□□□□ 0.24
CLDND1-224ENST00000511667 PRO3102Q9H379 93 aa16.58■□□□□ 0.24
CLDND1-224ENST00000511667 USP40Q9NVE5 1235 aa16.58■□□□□ 0.24
CLDND1-224ENST00000511667 SNCAIPQ9Y6H5 919 aa16.58■□□□□ 0.24
CLDND1-224ENST00000511667 MROH7-TTC4A0A0A0MT08 1334 aa16.58■□□□□ 0.24
CLDND1-224ENST00000511667 COL2A1P02458 1487 aaPredicted RBP16.57■□□□□ 0.24
CLDND1-224ENST00000511667 SPDYE5A6NIY4 337 aa16.57■□□□□ 0.24
CLDND1-224ENST00000511667 SH3BP5LQ7L8J4 393 aa16.57■□□□□ 0.24
CLDND1-224ENST00000511667 ZFPM1Q8IX07 1006 aa16.57■□□□□ 0.24
CLDND1-224ENST00000511667 SLF2Q8IX21 1173 aa16.57■□□□□ 0.24
CLDND1-224ENST00000511667 PTPN18Q99952 460 aa16.57■□□□□ 0.24
CLDND1-224ENST00000511667 ABCF2Q9UG63 623 aa16.57■□□□□ 0.24
CLDND1-224ENST00000511667 COG6Q9Y2V7 657 aa16.57■□□□□ 0.24
CLDND1-224ENST00000511667 A0A1W2PPC1 479 aa16.56■□□□□ 0.24
CLDND1-224ENST00000511667 CYP2E1P05181 493 aaPredicted RBP16.56■□□□□ 0.24
CLDND1-224ENST00000511667 C20orf194Q5TEA3 1177 aa16.56■□□□□ 0.24
CLDND1-224ENST00000511667 TBC1D9Q6ZT07 1266 aa16.56■□□□□ 0.24
CLDND1-224ENST00000511667 ERICH6Q7L0X2 663 aa16.56■□□□□ 0.24
CLDND1-224ENST00000511667 DZIP1Q86YF9 867 aaKnown RBP16.56■□□□□ 0.24
CLDND1-224ENST00000511667 CNKSR2Q8WXI2 1034 aa16.56■□□□□ 0.24
CLDND1-224ENST00000511667 OPTNQ96CV9 577 aa16.56■□□□□ 0.24
CLDND1-224ENST00000511667 DDX4Q9NQI0 724 aaKnown RBP16.56■□□□□ 0.24
CLDND1-224ENST00000511667 TLR7Q9NYK1 1049 aaKnown RBP16.56■□□□□ 0.24
CLDND1-224ENST00000511667 PTCH2Q9Y6C5 1203 aa16.56■□□□□ 0.24
CLDND1-224ENST00000511667 MAST2Q6P0Q8 1798 aa16.56■□□□□ 0.24
CLDND1-224ENST00000511667 MYO5AQ9Y4I1 1855 aaKnown RBP16.55■□□□□ 0.24
CLDND1-224ENST00000511667 PHF20L1A8MW92 1017 aa16.55■□□□□ 0.24
CLDND1-224ENST00000511667 BTDP43251 543 aa16.55■□□□□ 0.24
CLDND1-224ENST00000511667 RGS3P49796 1198 aa16.55■□□□□ 0.24
CLDND1-224ENST00000511667 NOL9Q5SY16 702 aaKnown RBP16.55■□□□□ 0.24
CLDND1-224ENST00000511667 DCAF15Q66K64 600 aa16.55■□□□□ 0.24
CLDND1-224ENST00000511667 ELP3Q9H9T3 547 aa16.55■□□□□ 0.24
CLDND1-224ENST00000511667 DOCK2Q92608 1830 aa16.54■□□□□ 0.24
CLDND1-224ENST00000511667 MYCP01106 439 aaPredicted RBP16.54■□□□□ 0.24
CLDND1-224ENST00000511667 PPP4CP60510 307 aa16.54■□□□□ 0.24
CLDND1-224ENST00000511667 CAP1Q01518 475 aa16.54■□□□□ 0.24
CLDND1-224ENST00000511667 CCDC158Q5M9N0 1113 aa16.54■□□□□ 0.24
CLDND1-224ENST00000511667 GORABQ5T7V8 394 aa16.54■□□□□ 0.24
CLDND1-224ENST00000511667 ERO1BQ86YB8 467 aa16.54■□□□□ 0.24
CLDND1-224ENST00000511667 ERC1Q8IUD2 1116 aa16.54■□□□□ 0.24
CLDND1-224ENST00000511667 BRI3BPQ8WY22 251 aa16.54■□□□□ 0.24
CLDND1-224ENST00000511667 HTATIP2Q9BUP3 242 aa16.54■□□□□ 0.24
CLDND1-224ENST00000511667 ZNF341Q9BYN7 854 aa16.54■□□□□ 0.24
CLDND1-224ENST00000511667 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.54■□□□□ 0.24
CLDND1-224ENST00000511667 EXOC6BQ9Y2D4 811 aa16.54■□□□□ 0.24
CLDND1-224ENST00000511667 LDHCP07864 332 aa16.53■□□□□ 0.24
CLDND1-224ENST00000511667 GSTO1P78417 241 aa16.53■□□□□ 0.24
CLDND1-224ENST00000511667 TCP10Q12799 353 aa16.53■□□□□ 0.24
CLDND1-224ENST00000511667 OS9Q13438 667 aaPredicted RBP16.53■□□□□ 0.24
CLDND1-224ENST00000511667 HSP90AB4PQ58FF6 505 aa16.53■□□□□ 0.24
CLDND1-224ENST00000511667 ZKSCAN4Q969J2 545 aaPredicted RBP16.53■□□□□ 0.24
CLDND1-224ENST00000511667 WRNIP1Q96S55 665 aa16.53■□□□□ 0.24
CLDND1-224ENST00000511667 NR2E3Q9Y5X4 410 aa16.53■□□□□ 0.24
CLDND1-224ENST00000511667 DDTLA6NHG4 134 aaPredicted RBP16.52■□□□□ 0.24
CLDND1-224ENST00000511667 INPP5BP32019 993 aa16.52■□□□□ 0.24
CLDND1-224ENST00000511667 PPATQ06203 517 aa16.52■□□□□ 0.24
CLDND1-224ENST00000511667 PPIL2Q13356 520 aa16.52■□□□□ 0.24
CLDND1-224ENST00000511667 MIGA2Q7L4E1 593 aa16.52■□□□□ 0.24
CLDND1-224ENST00000511667 RHPN1Q8TCX5 695 aa16.52■□□□□ 0.24
CLDND1-224ENST00000511667 CCDC8Q9H0W5 538 aaPredicted RBP16.52■□□□□ 0.24
CLDND1-224ENST00000511667 CHMP4BQ9H444 224 aaKnown RBP16.52■□□□□ 0.24
CLDND1-224ENST00000511667 KCNH4Q9UQ05 1017 aa16.52■□□□□ 0.24
CLDND1-224ENST00000511667 CSADQ9Y600 493 aa16.52■□□□□ 0.24
CLDND1-224ENST00000511667 FOCADQ5VW36 1801 aa16.52■□□□□ 0.23
CLDND1-224ENST00000511667 CDK5RAP2Q96SN8 1893 aa16.51■□□□□ 0.23
CLDND1-224ENST00000511667 SOX1O00570 391 aaPredicted RBP16.51■□□□□ 0.23
CLDND1-224ENST00000511667 TBC1D12O60347 775 aa16.51■□□□□ 0.23
CLDND1-224ENST00000511667 ZAP70P43403 619 aa16.51■□□□□ 0.23
CLDND1-224ENST00000511667 GTF2A2P52657 109 aa16.51■□□□□ 0.23
CLDND1-224ENST00000511667 MOGSQ13724 837 aa16.51■□□□□ 0.23
CLDND1-224ENST00000511667 TTC39AQ5SRH9 613 aa16.51■□□□□ 0.23
CLDND1-224ENST00000511667 TMED8Q6PL24 325 aaPredicted RBP16.51■□□□□ 0.23
CLDND1-224ENST00000511667 ADGRA1Q86SQ6 560 aa16.51■□□□□ 0.23
CLDND1-224ENST00000511667 ZCCHC17Q9NP64 241 aaKnown RBP16.51■□□□□ 0.23
CLDND1-224ENST00000511667 PIH1D3Q9NQM4 214 aaKnown RBP16.51■□□□□ 0.23
CLDND1-224ENST00000511667 SNRKQ9NRH2 765 aa16.51■□□□□ 0.23
CLDND1-224ENST00000511667 LAMA3Q16787 3333 aa16.5■□□□□ 0.23
CLDND1-224ENST00000511667 IRF6O14896 467 aa16.5■□□□□ 0.23
CLDND1-224ENST00000511667 METTL16Q86W50 562 aaKnown RBP16.5■□□□□ 0.23
CLDND1-224ENST00000511667 SH3TC2Q8TF17 1288 aa16.5■□□□□ 0.23
CLDND1-224ENST00000511667 LRCH3Q96II8 777 aa16.5■□□□□ 0.23
CLDND1-224ENST00000511667 COL25A1Q9BXS0 654 aaPredicted RBP16.5■□□□□ 0.23
CLDND1-224ENST00000511667 RAI14Q9P0K7 980 aa16.5■□□□□ 0.23
CLDND1-224ENST00000511667 AK9Q5TCS8 1911 aa16.5■□□□□ 0.23
CLDND1-224ENST00000511667 SIPA1L1O43166 1804 aa16.49■□□□□ 0.23
CLDND1-224ENST00000511667 RAB11FIP3O75154 756 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms