RNA–Protein interactions for RNA: ENST00000509989.5

SNF8-206, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 3

Gene SNF8, Length 677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-206ENST00000509989 INPP5BP32019 993 aa16.55■□□□□ 0.24
SNF8-206ENST00000509989 DDX55Q8NHQ9 600 aaKnown RBP eCLIP16.55■□□□□ 0.243e-6■■■■■ 38.3
SNF8-206ENST00000509989 PHIPQ8WWQ0 1821 aa16.54■□□□□ 0.24
SNF8-206ENST00000509989 LDHCP07864 332 aa16.54■□□□□ 0.24
SNF8-206ENST00000509989 LBX1P52954 281 aa16.54■□□□□ 0.24
SNF8-206ENST00000509989 GSTO1P78417 241 aa16.54■□□□□ 0.24
SNF8-206ENST00000509989 VGLL4Q14135 290 aa16.54■□□□□ 0.24
SNF8-206ENST00000509989 SPRYD7Q5W111 196 aa16.54■□□□□ 0.24
SNF8-206ENST00000509989 WNK4Q96J92 1243 aa16.54■□□□□ 0.24
SNF8-206ENST00000509989 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.54■□□□□ 0.24
SNF8-206ENST00000509989 BAZ2AQ9UIF9 1905 aaKnown RBP16.53■□□□□ 0.24
SNF8-206ENST00000509989 ENTPD3O75355 529 aa16.53■□□□□ 0.24
SNF8-206ENST00000509989 MAP4K4O95819 1239 aaPredicted RBP16.53■□□□□ 0.24
SNF8-206ENST00000509989 IREB2P48200 963 aaKnown RBP16.53■□□□□ 0.24
SNF8-206ENST00000509989 SLC4A8Q2Y0W8 1093 aa16.53■□□□□ 0.24
SNF8-206ENST00000509989 SLF2Q8IX21 1173 aa16.53■□□□□ 0.24
SNF8-206ENST00000509989 TEX11Q8IYF3 940 aa16.53■□□□□ 0.24
SNF8-206ENST00000509989 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.53■□□□□ 0.24
SNF8-206ENST00000509989 SLC10A4Q96EP9 437 aa16.53■□□□□ 0.24
SNF8-206ENST00000509989 SNCAIPQ9Y6H5 919 aa16.53■□□□□ 0.24
SNF8-206ENST00000509989 DDX60LQ5H9U9 1706 aaKnown RBP16.53■□□□□ 0.24
SNF8-206ENST00000509989 NAV1Q8NEY1 1877 aa16.52■□□□□ 0.24
SNF8-206ENST00000509989 SALL3Q9BXA9 1300 aa16.52■□□□□ 0.24
SNF8-206ENST00000509989 TCRBV5S4A2TA0A5A2 114 aa16.52■□□□□ 0.24
SNF8-206ENST00000509989 PDE6AP16499 860 aa16.52■□□□□ 0.24
SNF8-206ENST00000509989 PPP4CP60510 307 aa16.52■□□□□ 0.24
SNF8-206ENST00000509989 MAP2K1Q02750 393 aaPredicted RBP16.52■□□□□ 0.24
SNF8-206ENST00000509989 EVX2Q03828 476 aa16.52■□□□□ 0.24
SNF8-206ENST00000509989 HDAC1Q13547 482 aaPredicted RBP16.52■□□□□ 0.24
SNF8-206ENST00000509989 RRP1BQ14684 758 aaKnown RBP16.52■□□□□ 0.24
SNF8-206ENST00000509989 MAPKAPK5Q8IW41 473 aa16.52■□□□□ 0.24
SNF8-206ENST00000509989 ANKRD13AQ8IZ07 590 aa16.52■□□□□ 0.24
SNF8-206ENST00000509989 WRNIP1Q96S55 665 aa16.52■□□□□ 0.24
SNF8-206ENST00000509989 HAUS7Q99871 368 aa16.52■□□□□ 0.24
SNF8-206ENST00000509989 R3HDMLQ9H3Y0 253 aa16.52■□□□□ 0.24
SNF8-206ENST00000509989 PAG1Q9NWQ8 432 aa16.52■□□□□ 0.24
SNF8-206ENST00000509989 RNF186Q9NXI6 227 aa16.52■□□□□ 0.24
SNF8-206ENST00000509989 DOCK1Q14185 1865 aa16.52■□□□□ 0.23
SNF8-206ENST00000509989 MAP3K9P80192 1104 aa16.51■□□□□ 0.23
SNF8-206ENST00000509989 ANKRD45Q5TZF3 282 aa16.51■□□□□ 0.23
SNF8-206ENST00000509989 CCDC84Q86UT8 332 aaPredicted RBP16.51■□□□□ 0.23
SNF8-206ENST00000509989 TGFBRAP1Q8WUH2 860 aa16.51■□□□□ 0.23
SNF8-206ENST00000509989 OSBPL5Q9H0X9 879 aaPredicted RBP16.51■□□□□ 0.23
SNF8-206ENST00000509989 ECHDC1Q9NTX5 307 aa16.51■□□□□ 0.23
SNF8-206ENST00000509989 PTPRFP10586 1907 aa16.51■□□□□ 0.23
SNF8-206ENST00000509989 ZNF532Q9HCE3 1301 aa16.5■□□□□ 0.23
SNF8-206ENST00000509989 PHF20L1A8MW92 1017 aa16.5■□□□□ 0.23
SNF8-206ENST00000509989 TRPA1O75762 1119 aa16.5■□□□□ 0.23
SNF8-206ENST00000509989 SLC9C2Q5TAH2 1124 aa16.5■□□□□ 0.23
SNF8-206ENST00000509989 B4GALNT3Q6L9W6 998 aa16.5■□□□□ 0.23
SNF8-206ENST00000509989 ZSCAN29Q8IWY8 852 aaPredicted RBP16.5■□□□□ 0.23
SNF8-206ENST00000509989 PI4K2BQ8TCG2 481 aa16.5■□□□□ 0.23
SNF8-206ENST00000509989 OPTNQ96CV9 577 aa16.5■□□□□ 0.23
SNF8-206ENST00000509989 RIOK1Q9BRS2 568 aaKnown RBP16.5■□□□□ 0.23
SNF8-206ENST00000509989 SAP30BPQ9UHR5 308 aaKnown RBP16.5■□□□□ 0.23
SNF8-206ENST00000509989 ZNF112Q9UJU3 913 aa16.5■□□□□ 0.23
SNF8-206ENST00000509989 FLT1P17948 1338 aa16.49■□□□□ 0.23
SNF8-206ENST00000509989 MAP3K12Q12852 859 aa16.49■□□□□ 0.23
SNF8-206ENST00000509989 SHROOM1Q2M3G4 852 aaPredicted RBP16.49■□□□□ 0.23
SNF8-206ENST00000509989 AIDAQ96BJ3 306 aa16.49■□□□□ 0.23
SNF8-206ENST00000509989 PTPN18Q99952 460 aa16.49■□□□□ 0.23
SNF8-206ENST00000509989 ZNF341Q9BYN7 854 aa16.49■□□□□ 0.23
SNF8-206ENST00000509989 SMIM22K7EJ46 135 aa16.48■□□□□ 0.23
SNF8-206ENST00000509989 IGF2BP3O00425 579 aaKnown RBP eCLIP16.48■□□□□ 0.23
SNF8-206ENST00000509989 CTCFP49711 727 aaPredicted RBP16.48■□□□□ 0.23
SNF8-206ENST00000509989 JAG1P78504 1218 aa16.48■□□□□ 0.23
SNF8-206ENST00000509989 MAP3K10Q02779 954 aa16.48■□□□□ 0.23
SNF8-206ENST00000509989 LCORLQ8N3X6 602 aa16.48■□□□□ 0.23
SNF8-206ENST00000509989 OTUD5Q96G74 571 aa16.48■□□□□ 0.23
SNF8-206ENST00000509989 MS4A4AQ96JQ5 239 aa16.48■□□□□ 0.23
SNF8-206ENST00000509989 DNAJC18Q9H819 358 aa16.48■□□□□ 0.23
SNF8-206ENST00000509989 PALD1Q9ULE6 856 aa16.48■□□□□ 0.23
SNF8-206ENST00000509989 PRKAB2O43741 272 aa16.47■□□□□ 0.23
SNF8-206ENST00000509989 TBC1D8O95759 1140 aa16.47■□□□□ 0.23
SNF8-206ENST00000509989 BAG3O95817 575 aa16.47■□□□□ 0.23
SNF8-206ENST00000509989 ADD2P35612 726 aa16.47■□□□□ 0.23
SNF8-206ENST00000509989 TM4SF4P48230 202 aa16.47■□□□□ 0.23
SNF8-206ENST00000509989 TTF1Q15361 905 aaPredicted RBP16.47■□□□□ 0.23
SNF8-206ENST00000509989 SMC5Q8IY18 1101 aa16.47■□□□□ 0.23
SNF8-206ENST00000509989 NOL10Q9BSC4 688 aaKnown RBP16.47■□□□□ 0.23
SNF8-206ENST00000509989 LNPKQ9C0E8 428 aa16.47■□□□□ 0.23
SNF8-206ENST00000509989 ARMT1Q9H993 441 aa16.47■□□□□ 0.23
SNF8-206ENST00000509989 SPDYE5A6NIY4 337 aa16.46■□□□□ 0.23
SNF8-206ENST00000509989 NPM3O75607 178 aaKnown RBP16.46■□□□□ 0.23
SNF8-206ENST00000509989 DCAF15Q66K64 600 aa16.46■□□□□ 0.23
SNF8-206ENST00000509989 BRI3BPQ8WY22 251 aa16.46■□□□□ 0.23
SNF8-206ENST00000509989 ZSWIM8A7E2V4 1837 aa16.46■□□□□ 0.23
SNF8-206ENST00000509989 COL2A1P02458 1487 aaPredicted RBP16.46■□□□□ 0.23
SNF8-206ENST00000509989 MAGEB6P1A0A0J9YX57 407 aa16.45■□□□□ 0.22
SNF8-206ENST00000509989 IRF6O14896 467 aa16.45■□□□□ 0.22
SNF8-206ENST00000509989 ZBTB48P10074 688 aaPredicted RBP16.45■□□□□ 0.22
SNF8-206ENST00000509989 SDR42E1Q8WUS8 393 aa16.45■□□□□ 0.22
SNF8-206ENST00000509989 GCC1Q96CN9 775 aa16.45■□□□□ 0.22
SNF8-206ENST00000509989 BEGAINQ9BUH8 593 aa16.45■□□□□ 0.22
SNF8-206ENST00000509989 PUS7LQ9H0K6 701 aaKnown RBP16.45■□□□□ 0.22
SNF8-206ENST00000509989 CSADQ9Y600 493 aa16.45■□□□□ 0.22
SNF8-206ENST00000509989 UNCXA6NJT0 531 aa16.44■□□□□ 0.22
SNF8-206ENST00000509989 MBD4O95243 580 aa16.44■□□□□ 0.22
SNF8-206ENST00000509989 CYP2D6P10635 497 aa16.44■□□□□ 0.22
SNF8-206ENST00000509989 MX1P20591 662 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms