RNA–Protein interactions for RNA: ENST00000507573.1

CNBP-209, Transcript of CCHC-type zinc finger nucleic acid binding protein, humanhuman

TSL 2

Gene CNBP, Length 641 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNBP-209ENST00000507573 ERO1BQ86YB8 467 aa16.29■□□□□ 0.2
CNBP-209ENST00000507573 ZFPM1Q8IX07 1006 aa16.29■□□□□ 0.2
CNBP-209ENST00000507573 ZNF296Q8WUU4 475 aaPredicted RBP16.29■□□□□ 0.2
CNBP-209ENST00000507573 ZKSCAN4Q969J2 545 aaPredicted RBP16.29■□□□□ 0.2
CNBP-209ENST00000507573 OTUD5Q96G74 571 aa16.29■□□□□ 0.2
CNBP-209ENST00000507573 MS4A4AQ96JQ5 239 aa16.29■□□□□ 0.2
CNBP-209ENST00000507573 SNRKQ9NRH2 765 aa16.29■□□□□ 0.2
CNBP-209ENST00000507573 TLR7Q9NYK1 1049 aaKnown RBP16.29■□□□□ 0.2
CNBP-209ENST00000507573 PTPRFP10586 1907 aa16.28■□□□□ 0.2
CNBP-209ENST00000507573 CYP2E1P05181 493 aaPredicted RBP16.28■□□□□ 0.2
CNBP-209ENST00000507573 GTF2A2P52657 109 aa16.28■□□□□ 0.2
CNBP-209ENST00000507573 RHBDL3P58872 404 aa16.28■□□□□ 0.2
CNBP-209ENST00000507573 RHPN1Q8TCX5 695 aa16.28■□□□□ 0.2
CNBP-209ENST00000507573 ZNF112Q9UJU3 913 aa16.28■□□□□ 0.2
CNBP-209ENST00000507573 PHIPQ8WWQ0 1821 aa16.28■□□□□ 0.2
CNBP-209ENST00000507573 MYH1P12882 1939 aa16.27■□□□□ 0.2
CNBP-209ENST00000507573 INPP5BP32019 993 aa16.27■□□□□ 0.2
CNBP-209ENST00000507573 PICALMQ13492 652 aa16.27■□□□□ 0.2
CNBP-209ENST00000507573 C20orf194Q5TEA3 1177 aa16.27■□□□□ 0.2
CNBP-209ENST00000507573 CTU1Q7Z7A3 348 aaKnown RBP16.27■□□□□ 0.2
CNBP-209ENST00000507573 AACSQ86V21 672 aa16.27■□□□□ 0.2
CNBP-209ENST00000507573 ZSCAN29Q8IWY8 852 aaPredicted RBP16.27■□□□□ 0.2
CNBP-209ENST00000507573 SIRT2Q8IXJ6 389 aa16.27■□□□□ 0.2
CNBP-209ENST00000507573 PTPN18Q99952 460 aa16.27■□□□□ 0.2
CNBP-209ENST00000507573 DDX4Q9NQI0 724 aaKnown RBP16.27■□□□□ 0.2
CNBP-209ENST00000507573 PCDH10Q9P2E7 1040 aa16.27■□□□□ 0.2
CNBP-209ENST00000507573 ATRNL1Q5VV63 1379 aa16.26■□□□□ 0.19
CNBP-209ENST00000507573 CCL15-CCL14A0A0B4J2E2 113 aa16.26■□□□□ 0.19
CNBP-209ENST00000507573 FKTNO75072 461 aa16.26■□□□□ 0.19
CNBP-209ENST00000507573 ZAP70P43403 619 aa16.26■□□□□ 0.19
CNBP-209ENST00000507573 PPATQ06203 517 aa16.26■□□□□ 0.19
CNBP-209ENST00000507573 PPIL2Q13356 520 aa16.26■□□□□ 0.19
CNBP-209ENST00000507573 CCL15Q16663 113 aa16.26■□□□□ 0.19
CNBP-209ENST00000507573 NAA16Q6N069 864 aaPredicted RBP16.26■□□□□ 0.19
CNBP-209ENST00000507573 SH3BP5LQ7L8J4 393 aa16.26■□□□□ 0.19
CNBP-209ENST00000507573 KIF1BPQ96EK5 621 aa16.26■□□□□ 0.19
CNBP-209ENST00000507573 NOL10Q9BSC4 688 aaKnown RBP16.26■□□□□ 0.19
CNBP-209ENST00000507573 R3HDMLQ9H3Y0 253 aa16.26■□□□□ 0.19
CNBP-209ENST00000507573 IL1RAPL2Q9NP60 686 aa16.26■□□□□ 0.19
CNBP-209ENST00000507573 COL2A1P02458 1487 aaPredicted RBP16.26■□□□□ 0.19
CNBP-209ENST00000507573 MYH7P12883 1935 aa16.25■□□□□ 0.19
CNBP-209ENST00000507573 SIPA1L1O43166 1804 aa16.25■□□□□ 0.19
CNBP-209ENST00000507573 DDTLA6NHG4 134 aaPredicted RBP16.25■□□□□ 0.19
CNBP-209ENST00000507573 IRF6O14896 467 aa16.25■□□□□ 0.19
CNBP-209ENST00000507573 RAB11FIP3O75154 756 aa16.25■□□□□ 0.19
CNBP-209ENST00000507573 BAG3O95817 575 aa16.25■□□□□ 0.19
CNBP-209ENST00000507573 MAP3K10Q02779 954 aa16.25■□□□□ 0.19
CNBP-209ENST00000507573 NOL9Q5SY16 702 aaKnown RBP16.25■□□□□ 0.19
CNBP-209ENST00000507573 CLASRPQ8N2M8 674 aaKnown RBP16.25■□□□□ 0.19
CNBP-209ENST00000507573 BRI3BPQ8WY22 251 aa16.25■□□□□ 0.19
CNBP-209ENST00000507573 CCDC85CA6NKD9 419 aa16.24■□□□□ 0.19
CNBP-209ENST00000507573 CETPP11597 493 aa16.24■□□□□ 0.19
CNBP-209ENST00000507573 PLCG2P16885 1265 aa16.24■□□□□ 0.19
CNBP-209ENST00000507573 CRHR2Q13324 411 aa16.24■□□□□ 0.19
CNBP-209ENST00000507573 SNAPC2Q13487 334 aa16.24■□□□□ 0.19
CNBP-209ENST00000507573 PKN2Q16513 984 aaKnown RBP16.24■□□□□ 0.19
CNBP-209ENST00000507573 PIH1D3Q9NQM4 214 aaKnown RBP16.24■□□□□ 0.19
CNBP-209ENST00000507573 PHF20L1A8MW92 1017 aa16.23■□□□□ 0.19
CNBP-209ENST00000507573 APBB1O00213 710 aa16.23■□□□□ 0.19
CNBP-209ENST00000507573 TBC1D12O60347 775 aa16.23■□□□□ 0.19
CNBP-209ENST00000507573 PPP4CP60510 307 aa16.23■□□□□ 0.19
CNBP-209ENST00000507573 TEX11Q8IYF3 940 aa16.23■□□□□ 0.19
CNBP-209ENST00000507573 OSBPL5Q9H0X9 879 aaPredicted RBP16.23■□□□□ 0.19
CNBP-209ENST00000507573 AATFQ9NY61 560 aaKnown RBP eCLIP16.23■□□□□ 0.19
CNBP-209ENST00000507573 MLLT1Q03111 559 aaPredicted RBP16.22■□□□□ 0.19
CNBP-209ENST00000507573 TAF1CQ15572 869 aaPredicted RBP16.22■□□□□ 0.19
CNBP-209ENST00000507573 ADGRA1Q86SQ6 560 aa16.22■□□□□ 0.19
CNBP-209ENST00000507573 SCYL3Q8IZE3 742 aa16.22■□□□□ 0.19
CNBP-209ENST00000507573 FAM43AQ8N2R8 423 aa16.22■□□□□ 0.19
CNBP-209ENST00000507573 SH3RF3Q8TEJ3 882 aaPredicted RBP16.22■□□□□ 0.19
CNBP-209ENST00000507573 ZCCHC17Q9NP64 241 aaKnown RBP16.22■□□□□ 0.19
CNBP-209ENST00000507573 IDH1O75874 414 aaKnown RBP16.21■□□□□ 0.19
CNBP-209ENST00000507573 IFIT2P09913 472 aaKnown RBP16.21■□□□□ 0.19
CNBP-209ENST00000507573 TMED8Q6PL24 325 aaPredicted RBP16.21■□□□□ 0.19
CNBP-209ENST00000507573 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.21■□□□□ 0.19
CNBP-209ENST00000507573 ZFYVE28Q9HCC9 887 aa16.21■□□□□ 0.19
CNBP-209ENST00000507573 KCNH4Q9UQ05 1017 aa16.21■□□□□ 0.19
CNBP-209ENST00000507573 CTNND1O60716 968 aaKnown RBP16.2■□□□□ 0.18
CNBP-209ENST00000507573 MAP3K12Q12852 859 aa16.2■□□□□ 0.18
CNBP-209ENST00000507573 TTF1Q15361 905 aaPredicted RBP16.2■□□□□ 0.18
CNBP-209ENST00000507573 ERO1AQ96HE7 468 aa16.2■□□□□ 0.18
CNBP-209ENST00000507573 DHX36Q9H2U1 1008 aaKnown RBP16.2■□□□□ 0.18
CNBP-209ENST00000507573 ANTXR1Q9H6X2 564 aa16.2■□□□□ 0.18
CNBP-209ENST00000507573 PICK1Q9NRD5 415 aa16.2■□□□□ 0.18
CNBP-209ENST00000507573 NDUFB9Q9Y6M9 179 aa16.2■□□□□ 0.18
CNBP-209ENST00000507573 NAV1Q8NEY1 1877 aa16.19■□□□□ 0.18
CNBP-209ENST00000507573 BTBD19C9JJ37 291 aa16.19■□□□□ 0.18
CNBP-209ENST00000507573 CXCL11O14625 94 aa16.19■□□□□ 0.18
CNBP-209ENST00000507573 CYP7A1P22680 504 aa16.19■□□□□ 0.18
CNBP-209ENST00000507573 SP3Q02447 781 aa16.19■□□□□ 0.18
CNBP-209ENST00000507573 CERS3Q8IU89 383 aa16.19■□□□□ 0.18
CNBP-209ENST00000507573 MAGEB6Q8N7X4 407 aa16.19■□□□□ 0.18
CNBP-209ENST00000507573 TGFBRAP1Q8WUH2 860 aa16.19■□□□□ 0.18
CNBP-209ENST00000507573 XPO5Q9HAV4 1204 aaKnown RBP eCLIP16.19■□□□□ 0.182e-7■■□□□ 13
CNBP-209ENST00000507573 MGAMO43451 1857 aa16.18■□□□□ 0.18
CNBP-209ENST00000507573 SLURP2P0DP57 97 aa16.18■□□□□ 0.18
CNBP-209ENST00000507573 PTPRAP18433 802 aa16.18■□□□□ 0.18
CNBP-209ENST00000507573 FBXO46Q6PJ61 603 aaPredicted RBP16.18■□□□□ 0.18
CNBP-209ENST00000507573 ANKRD23Q86SG2 305 aa16.18■□□□□ 0.18
CNBP-209ENST00000507573 LRRCC1Q9C099 1032 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms