RNA–Protein interactions for RNA: ENST00000506706.5

RNF4-207, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 2,098 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-207ENST00000506706 ATP2B4P23634 1241 aa25.92■■□□□ 1.74
RNF4-207ENST00000506706 WTAPQ15007 396 aa25.92■■□□□ 1.74
RNF4-207ENST00000506706 TMTC2Q8N394 836 aa25.92■■□□□ 1.74
RNF4-207ENST00000506706 AATFQ9NY61 560 aaKnown RBP eCLIP25.92■■□□□ 1.74
RNF4-207ENST00000506706 CDC27P30260 824 aa25.92■■□□□ 1.74
RNF4-207ENST00000506706 DZIP1Q86YF9 867 aaKnown RBP25.92■■□□□ 1.74
RNF4-207ENST00000506706 ESR2Q92731 530 aa25.92■■□□□ 1.74
RNF4-207ENST00000506706 JAG2Q9Y219 1238 aa25.92■■□□□ 1.74
RNF4-207ENST00000506706 BAZ2AQ9UIF9 1905 aaKnown RBP25.91■■□□□ 1.74
RNF4-207ENST00000506706 CRAMP1Q96RY5 1269 aa25.91■■□□□ 1.74
RNF4-207ENST00000506706 ZKSCAN3Q9BRR0 538 aa25.91■■□□□ 1.74
RNF4-207ENST00000506706 NID2Q14112 1375 aa25.9■■□□□ 1.74
RNF4-207ENST00000506706 KLRG2A4D1S0 409 aaPredicted RBP25.9■■□□□ 1.74
RNF4-207ENST00000506706 UFL1O94874 794 aa25.9■■□□□ 1.74
RNF4-207ENST00000506706 APBA3O96018 575 aa25.9■■□□□ 1.74
RNF4-207ENST00000506706 PCP11498 1178 aaKnown RBP25.9■■□□□ 1.74
RNF4-207ENST00000506706 CCDC173Q0VFZ6 552 aa25.9■■□□□ 1.74
RNF4-207ENST00000506706 CCDC144CPQ8IYA2 1237 aa25.9■■□□□ 1.74
RNF4-207ENST00000506706 UBAC1Q9BSL1 405 aa25.9■■□□□ 1.74
RNF4-207ENST00000506706 GGA1Q9UJY5 639 aa25.9■■□□□ 1.74
RNF4-207ENST00000506706 KIAA1551Q9HCM1 1747 aa25.9■■□□□ 1.74
RNF4-207ENST00000506706 LDHBP07195 334 aaKnown RBP25.89■■□□□ 1.74
RNF4-207ENST00000506706 ZNF827Q17R98 1081 aa25.89■■□□□ 1.74
RNF4-207ENST00000506706 OTUD7BQ6GQQ9 843 aa25.89■■□□□ 1.74
RNF4-207ENST00000506706 CTR9Q6PD62 1173 aa25.89■■□□□ 1.74
RNF4-207ENST00000506706 MYL10Q9BUA6 226 aa25.89■■□□□ 1.74
RNF4-207ENST00000506706 ATP8A2Q9NTI2 1148 aa25.89■■□□□ 1.74
RNF4-207ENST00000506706 FAM217BQ9NTX9 383 aaPredicted RBP25.89■■□□□ 1.74
RNF4-207ENST00000506706 ILDR1Q86SU0 546 aaPredicted RBP25.89■■□□□ 1.73
RNF4-207ENST00000506706 NLGN1Q8N2Q7 840 aa25.89■■□□□ 1.73
RNF4-207ENST00000506706 AKT1S1Q96B36 256 aa25.89■■□□□ 1.73
RNF4-207ENST00000506706 PGBD1Q96JS3 809 aa25.89■■□□□ 1.73
RNF4-207ENST00000506706 GPR101Q96P66 508 aaPredicted RBP25.89■■□□□ 1.73
RNF4-207ENST00000506706 RCOR1Q9UKL0 485 aa25.89■■□□□ 1.73
RNF4-207ENST00000506706 LIG1P18858 919 aa25.88■■□□□ 1.73
RNF4-207ENST00000506706 NTRK3Q16288 839 aa25.88■■□□□ 1.73
RNF4-207ENST00000506706 DUOX1Q9NRD9 1551 aa25.88■■□□□ 1.73
RNF4-207ENST00000506706 CYP2D7A0A087X1C5 515 aa25.87■■□□□ 1.73
RNF4-207ENST00000506706 USP17L12C9JPN9 530 aa25.87■■□□□ 1.73
RNF4-207ENST00000506706 USP17L21D6R901 530 aa25.87■■□□□ 1.73
RNF4-207ENST00000506706 IARSP41252 1262 aaKnown RBP25.87■■□□□ 1.73
RNF4-207ENST00000506706 CEBPZQ03701 1054 aaKnown RBP25.87■■□□□ 1.73
RNF4-207ENST00000506706 USP28Q96RU2 1077 aa25.87■■□□□ 1.73
RNF4-207ENST00000506706 ALG1Q9BT22 464 aa25.87■■□□□ 1.73
RNF4-207ENST00000506706 DCP1AQ9NPI6 582 aaPredicted RBP25.87■■□□□ 1.73
RNF4-207ENST00000506706 FGRP09769 529 aa25.87■■□□□ 1.73
RNF4-207ENST00000506706 RCAN1P53805 252 aa25.87■■□□□ 1.73
RNF4-207ENST00000506706 PHKBQ93100 1093 aa25.87■■□□□ 1.73
RNF4-207ENST00000506706 PODXL2Q9NZ53 605 aa25.87■■□□□ 1.73
RNF4-207ENST00000506706 SMIM22K7EJ46 135 aa25.86■■□□□ 1.73
RNF4-207ENST00000506706 GSTO1P78417 241 aa25.86■■□□□ 1.73
RNF4-207ENST00000506706 TMC4Q7Z404 712 aa25.86■■□□□ 1.73
RNF4-207ENST00000506706 BRAPQ7Z569 592 aa25.86■■□□□ 1.73
RNF4-207ENST00000506706 BICD2Q8TD16 824 aa25.86■■□□□ 1.73
RNF4-207ENST00000506706 PPP1R9BQ96SB3 815 aa25.86■■□□□ 1.73
RNF4-207ENST00000506706 COL23A1Q86Y22 540 aaPredicted RBP25.86■■□□□ 1.73
RNF4-207ENST00000506706 CD209Q9NNX6 404 aa25.86■■□□□ 1.73
RNF4-207ENST00000506706 STK36Q9NRP7 1315 aa25.86■■□□□ 1.73
RNF4-207ENST00000506706 SSRP1Q08945 709 aaKnown RBP25.85■■□□□ 1.73
RNF4-207ENST00000506706 RTN1Q16799 776 aa25.85■■□□□ 1.73
RNF4-207ENST00000506706 FLAD1Q8NFF5 587 aa25.85■■□□□ 1.73
RNF4-207ENST00000506706 NUP62CLQ9H1M0 184 aa25.85■■□□□ 1.73
RNF4-207ENST00000506706 ARPP21Q9UBL0 812 aaPredicted RBP25.85■■□□□ 1.73
RNF4-207ENST00000506706 TNKSO95271 1327 aa25.84■■□□□ 1.73
RNF4-207ENST00000506706 SEC23AQ15436 765 aa25.84■■□□□ 1.73
RNF4-207ENST00000506706 RNF214Q8ND24 703 aa25.84■■□□□ 1.73
RNF4-207ENST00000506706 FTOQ9C0B1 505 aaKnown RBP eCLIP25.84■■□□□ 1.73
RNF4-207ENST00000506706 GJB4Q9NTQ9 266 aa25.84■■□□□ 1.73
RNF4-207ENST00000506706 DDX19AQ9NUU7 478 aaKnown RBP25.84■■□□□ 1.73
RNF4-207ENST00000506706 LAMB1P07942 1786 aa25.84■■□□□ 1.73
RNF4-207ENST00000506706 RANBP6O60518 1105 aaKnown RBP25.84■■□□□ 1.73
RNF4-207ENST00000506706 SLC3A2P08195 630 aaKnown RBP25.84■■□□□ 1.73
RNF4-207ENST00000506706 IFNAR1P17181 557 aa25.84■■□□□ 1.73
RNF4-207ENST00000506706 SBK1Q52WX2 424 aa25.84■■□□□ 1.73
RNF4-207ENST00000506706 DACT1Q9NYF0 836 aa25.84■■□□□ 1.73
RNF4-207ENST00000506706 CCDC196A0A1B0GTZ2 297 aa25.83■■□□□ 1.73
RNF4-207ENST00000506706 IL1R1P14778 569 aa25.83■■□□□ 1.73
RNF4-207ENST00000506706 KIF23Q02241 960 aaPredicted RBP25.83■■□□□ 1.73
RNF4-207ENST00000506706 ZNF654Q8IZM8 581 aa25.83■■□□□ 1.73
RNF4-207ENST00000506706 AIFM3Q96NN9 605 aa25.83■■□□□ 1.73
RNF4-207ENST00000506706 ZSCAN10Q96SZ4 725 aaPredicted RBP25.83■■□□□ 1.73
RNF4-207ENST00000506706 MYH2Q9UKX2 1941 aa25.83■■□□□ 1.73
RNF4-207ENST00000506706 FMNL1O95466 1100 aaPredicted RBP25.83■■□□□ 1.72
RNF4-207ENST00000506706 TBC1D16Q8TBP0 767 aa25.83■■□□□ 1.72
RNF4-207ENST00000506706 SLC26A6Q9BXS9 759 aa25.83■■□□□ 1.72
RNF4-207ENST00000506706 RTEL1Q9NZ71 1219 aa25.83■■□□□ 1.72
RNF4-207ENST00000506706 ANKRD31Q8N7Z5 1873 aa25.82■■□□□ 1.72
RNF4-207ENST00000506706 ECM29Q5VYK3 1845 aa25.82■■□□□ 1.72
RNF4-207ENST00000506706 PPEF1O14829 653 aaPredicted RBP25.82■■□□□ 1.72
RNF4-207ENST00000506706 LDHCP07864 332 aa25.82■■□□□ 1.72
RNF4-207ENST00000506706 RXRBP28702 533 aa25.82■■□□□ 1.72
RNF4-207ENST00000506706 IQCA1Q86XH1 822 aa25.82■■□□□ 1.72
RNF4-207ENST00000506706 SP8Q8IXZ3 490 aa25.82■■□□□ 1.72
RNF4-207ENST00000506706 WASF1Q92558 559 aa25.82■■□□□ 1.72
RNF4-207ENST00000506706 POLLQ9UGP5 575 aa25.82■■□□□ 1.72
RNF4-207ENST00000506706 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.82■■□□□ 1.72
RNF4-207ENST00000506706 LRRC37AA6NMS7 1700 aa25.82■■□□□ 1.72
RNF4-207ENST00000506706 NRXN2Q9P2S2 1712 aa25.81■■□□□ 1.72
RNF4-207ENST00000506706 ORC4O43929 436 aa25.81■■□□□ 1.72
RNF4-207ENST00000506706 BAG3O95817 575 aa25.81■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms