RNA–Protein interactions for RNA: ENST00000506575.1

CLDND1-211, Transcript of claudin domain containing 1, humanhuman

TSL 3

Gene CLDND1, Length 414 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-211ENST00000506575 RRP1P56182 461 aaKnown RBP19.01■□□□□ 0.63
CLDND1-211ENST00000506575 RHBDL3P58872 404 aa19.01■□□□□ 0.63
CLDND1-211ENST00000506575 OTUD7BQ6GQQ9 843 aa19.01■□□□□ 0.63
CLDND1-211ENST00000506575 IFNL1Q8IU54 200 aa19.01■□□□□ 0.63
CLDND1-211ENST00000506575 OTUD5Q96G74 571 aa19.01■□□□□ 0.63
CLDND1-211ENST00000506575 RFX7Q2KHR2 1363 aa19.01■□□□□ 0.63
CLDND1-211ENST00000506575 ERO1BQ86YB8 467 aa19■□□□□ 0.63
CLDND1-211ENST00000506575 TEX11Q8IYF3 940 aa19■□□□□ 0.63
CLDND1-211ENST00000506575 CNKSR2Q8WXI2 1034 aa19■□□□□ 0.63
CLDND1-211ENST00000506575 DDX4Q9NQI0 724 aaKnown RBP19■□□□□ 0.63
CLDND1-211ENST00000506575 PIH1D3Q9NQM4 214 aaKnown RBP19■□□□□ 0.63
CLDND1-211ENST00000506575 SNCAIPQ9Y6H5 919 aa19■□□□□ 0.63
CLDND1-211ENST00000506575 SPDYE5A6NIY4 337 aa18.99■□□□□ 0.63
CLDND1-211ENST00000506575 IDH1O75874 414 aaKnown RBP18.99■□□□□ 0.63
CLDND1-211ENST00000506575 PLCG2P16885 1265 aa18.99■□□□□ 0.63
CLDND1-211ENST00000506575 GTF2A2P52657 109 aa18.99■□□□□ 0.63
CLDND1-211ENST00000506575 AATFQ9NY61 560 aaKnown RBP eCLIP18.99■□□□□ 0.63
CLDND1-211ENST00000506575 IGF2BP3O00425 579 aaKnown RBP eCLIP18.98■□□□□ 0.63
CLDND1-211ENST00000506575 NPM3O75607 178 aaKnown RBP18.98■□□□□ 0.63
CLDND1-211ENST00000506575 INPP5BP32019 993 aa18.98■□□□□ 0.63
CLDND1-211ENST00000506575 LRRCC1Q9C099 1032 aa18.98■□□□□ 0.63
CLDND1-211ENST00000506575 ZNF112Q9UJU3 913 aa18.98■□□□□ 0.63
CLDND1-211ENST00000506575 NDUFB9Q9Y6M9 179 aa18.98■□□□□ 0.63
CLDND1-211ENST00000506575 CCL15-CCL14A0A0B4J2E2 113 aa18.97■□□□□ 0.63
CLDND1-211ENST00000506575 DDTLA6NHG4 134 aaPredicted RBP18.97■□□□□ 0.63
CLDND1-211ENST00000506575 CYP7A1P22680 504 aa18.97■□□□□ 0.63
CLDND1-211ENST00000506575 MAP3K12Q12852 859 aa18.97■□□□□ 0.63
CLDND1-211ENST00000506575 DGKZQ13574 1117 aa18.97■□□□□ 0.63
CLDND1-211ENST00000506575 TTF1Q15361 905 aaPredicted RBP18.97■□□□□ 0.63
CLDND1-211ENST00000506575 CCL15Q16663 113 aa18.97■□□□□ 0.63
CLDND1-211ENST00000506575 SH3BP5LQ7L8J4 393 aa18.97■□□□□ 0.63
CLDND1-211ENST00000506575 SH3RF3Q8TEJ3 882 aaPredicted RBP18.97■□□□□ 0.63
CLDND1-211ENST00000506575 CFHR5Q9BXR6 569 aa18.97■□□□□ 0.63
CLDND1-211ENST00000506575 TESPA1A2RU30 521 aaPredicted RBP18.96■□□□□ 0.63
CLDND1-211ENST00000506575 PPATQ06203 517 aa18.96■□□□□ 0.63
CLDND1-211ENST00000506575 PPIL2Q13356 520 aa18.96■□□□□ 0.63
CLDND1-211ENST00000506575 MS4A4AQ96JQ5 239 aa18.96■□□□□ 0.63
CLDND1-211ENST00000506575 OSBPL5Q9H0X9 879 aaPredicted RBP18.96■□□□□ 0.63
CLDND1-211ENST00000506575 ATRNL1Q5VV63 1379 aa18.95■□□□□ 0.62
CLDND1-211ENST00000506575 GPR25O00155 361 aa18.95■□□□□ 0.62
CLDND1-211ENST00000506575 CETPP11597 493 aa18.95■□□□□ 0.62
CLDND1-211ENST00000506575 PPP4CP60510 307 aa18.95■□□□□ 0.62
CLDND1-211ENST00000506575 SNAPC2Q13487 334 aa18.95■□□□□ 0.62
CLDND1-211ENST00000506575 NOM1Q5C9Z4 860 aaKnown RBP18.95■□□□□ 0.62
CLDND1-211ENST00000506575 NOL9Q5SY16 702 aaKnown RBP18.95■□□□□ 0.62
CLDND1-211ENST00000506575 TMED8Q6PL24 325 aaPredicted RBP18.95■□□□□ 0.62
CLDND1-211ENST00000506575 ADGRA1Q86SQ6 560 aa18.95■□□□□ 0.62
CLDND1-211ENST00000506575 MAGEB6Q8N7X4 407 aa18.95■□□□□ 0.62
CLDND1-211ENST00000506575 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.95■□□□□ 0.62
CLDND1-211ENST00000506575 ZNF296Q8WUU4 475 aaPredicted RBP18.95■□□□□ 0.62
CLDND1-211ENST00000506575 ABHD8Q96I13 439 aa18.95■□□□□ 0.62
CLDND1-211ENST00000506575 DNAJC2Q99543 621 aaKnown RBP18.95■□□□□ 0.62
CLDND1-211ENST00000506575 MCOLN1Q9GZU1 580 aa18.95■□□□□ 0.62
CLDND1-211ENST00000506575 ANTXR1Q9H6X2 564 aa18.95■□□□□ 0.62
CLDND1-211ENST00000506575 COL2A1P02458 1487 aaPredicted RBP18.95■□□□□ 0.62
CLDND1-211ENST00000506575 CDK5RAP2Q96SN8 1893 aa18.94■□□□□ 0.62
CLDND1-211ENST00000506575 IRF6O14896 467 aa18.94■□□□□ 0.62
CLDND1-211ENST00000506575 CERS3Q8IU89 383 aa18.94■□□□□ 0.62
CLDND1-211ENST00000506575 BRI3BPQ8WY22 251 aa18.94■□□□□ 0.62
CLDND1-211ENST00000506575 PTPN18Q99952 460 aa18.94■□□□□ 0.62
CLDND1-211ENST00000506575 PICK1Q9NRD5 415 aa18.94■□□□□ 0.62
CLDND1-211ENST00000506575 FOCADQ5VW36 1801 aa18.93■□□□□ 0.62
CLDND1-211ENST00000506575 PHF20L1A8MW92 1017 aa18.93■□□□□ 0.62
CLDND1-211ENST00000506575 GOLIM4O00461 696 aa18.93■□□□□ 0.62
CLDND1-211ENST00000506575 FKTNO75072 461 aa18.93■□□□□ 0.62
CLDND1-211ENST00000506575 MAP3K10Q02779 954 aa18.93■□□□□ 0.62
CLDND1-211ENST00000506575 CTU1Q7Z7A3 348 aaKnown RBP18.93■□□□□ 0.62
CLDND1-211ENST00000506575 MAPKAPK5Q8IW41 473 aa18.93■□□□□ 0.62
CLDND1-211ENST00000506575 TGFBRAP1Q8WUH2 860 aa18.93■□□□□ 0.62
CLDND1-211ENST00000506575 R3HDMLQ9H3Y0 253 aa18.93■□□□□ 0.62
CLDND1-211ENST00000506575 DCTPP1Q9H773 170 aa18.93■□□□□ 0.62
CLDND1-211ENST00000506575 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.93■□□□□ 0.621e-6■■■□□ 18.4
CLDND1-211ENST00000506575 SMARCA5O60264 1052 aaPredicted RBP18.92■□□□□ 0.62
CLDND1-211ENST00000506575 TBC1D12O60347 775 aa18.92■□□□□ 0.62
CLDND1-211ENST00000506575 DYNLL1P63167 89 aaKnown RBP18.92■□□□□ 0.62
CLDND1-211ENST00000506575 CRHR2Q13324 411 aa18.92■□□□□ 0.62
CLDND1-211ENST00000506575 SCYL3Q8IZE3 742 aa18.92■□□□□ 0.62
CLDND1-211ENST00000506575 MIGA1Q8NAN2 632 aa18.92■□□□□ 0.62
CLDND1-211ENST00000506575 DHX36Q9H2U1 1008 aaKnown RBP18.92■□□□□ 0.62
CLDND1-211ENST00000506575 DOCK1Q14185 1865 aa18.92■□□□□ 0.62
CLDND1-211ENST00000506575 CTNND1O60716 968 aaKnown RBP18.91■□□□□ 0.62
CLDND1-211ENST00000506575 ATP5JP18859 108 aa18.91■□□□□ 0.62
CLDND1-211ENST00000506575 TAF1CQ15572 869 aaPredicted RBP18.91■□□□□ 0.62
CLDND1-211ENST00000506575 CRBNQ96SW2 442 aa18.91■□□□□ 0.62
CLDND1-211ENST00000506575 BOLA2Q9H3K6 86 aa18.91■□□□□ 0.62
CLDND1-211ENST00000506575 FLT1P17948 1338 aa18.91■□□□□ 0.62
CLDND1-211ENST00000506575 SLC9C2Q5TAH2 1124 aa18.9■□□□□ 0.62
CLDND1-211ENST00000506575 TRIM34Q9BYJ4 488 aa18.9■□□□□ 0.62
CLDND1-211ENST00000506575 ZFYVE28Q9HCC9 887 aa18.9■□□□□ 0.62
CLDND1-211ENST00000506575 PAG1Q9NWQ8 432 aa18.9■□□□□ 0.62
CLDND1-211ENST00000506575 PI4KBQ9UBF8 816 aa18.9■□□□□ 0.62
CLDND1-211ENST00000506575 HERC5Q9UII4 1024 aaKnown RBP18.9■□□□□ 0.62
CLDND1-211ENST00000506575 PCDHB15Q9Y5E8 787 aa18.9■□□□□ 0.62
CLDND1-211ENST00000506575 FAM196BA6NMK8 535 aa18.89■□□□□ 0.61
CLDND1-211ENST00000506575 SLURP2P0DP57 97 aa18.89■□□□□ 0.61
CLDND1-211ENST00000506575 USP5P45974 858 aa18.89■□□□□ 0.61
CLDND1-211ENST00000506575 FAM43AQ8N2R8 423 aa18.89■□□□□ 0.61
CLDND1-211ENST00000506575 GPATCH3Q96I76 525 aa18.89■□□□□ 0.61
CLDND1-211ENST00000506575 KCNH4Q9UQ05 1017 aa18.89■□□□□ 0.61
CLDND1-211ENST00000506575 ZHX2Q9Y6X8 837 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms