RNA–Protein interactions for RNA: ENST00000505307.5

UBE2D3-220, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 5

Gene UBE2D3, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-220ENST00000505307 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.59■■□□□ 1.53
UBE2D3-220ENST00000505307 ATRNL1Q5VV63 1379 aa24.58■■□□□ 1.53
UBE2D3-220ENST00000505307 GNRH1P01148 92 aa24.58■■□□□ 1.53
UBE2D3-220ENST00000505307 ATP8B2P98198 1209 aa24.58■■□□□ 1.53
UBE2D3-220ENST00000505307 SSH3Q8TE77 659 aa24.58■■□□□ 1.53
UBE2D3-220ENST00000505307 PHF20L1A8MW92 1017 aa24.57■■□□□ 1.52
UBE2D3-220ENST00000505307 PICK1Q9NRD5 415 aa24.57■■□□□ 1.52
UBE2D3-220ENST00000505307 LACTBP83111 547 aaPredicted RBP24.56■■□□□ 1.52
UBE2D3-220ENST00000505307 NBPF11Q86T75 865 aa24.56■■□□□ 1.52
UBE2D3-220ENST00000505307 SCYL3Q8IZE3 742 aa24.56■■□□□ 1.52
UBE2D3-220ENST00000505307 NSUN4Q96CB9 384 aaKnown RBP24.56■■□□□ 1.52
UBE2D3-220ENST00000505307 PDHXO00330 501 aa24.55■■□□□ 1.52
UBE2D3-220ENST00000505307 IGSF3O75054 1194 aa24.55■■□□□ 1.52
UBE2D3-220ENST00000505307 PRMT2P55345 433 aa24.55■■□□□ 1.52
UBE2D3-220ENST00000505307 RHBDL3P58872 404 aa24.55■■□□□ 1.52
UBE2D3-220ENST00000505307 CAP1Q01518 475 aa24.55■■□□□ 1.52
UBE2D3-220ENST00000505307 OS9Q13438 667 aaPredicted RBP24.55■■□□□ 1.52
UBE2D3-220ENST00000505307 C17orf99Q6UX52 265 aa24.55■■□□□ 1.52
UBE2D3-220ENST00000505307 SH3BP5LQ7L8J4 393 aa24.55■■□□□ 1.52
UBE2D3-220ENST00000505307 DDX4Q9NQI0 724 aaKnown RBP24.55■■□□□ 1.52
UBE2D3-220ENST00000505307 RAI14Q9P0K7 980 aa24.55■■□□□ 1.52
UBE2D3-220ENST00000505307 DDTLA6NHG4 134 aaPredicted RBP24.54■■□□□ 1.52
UBE2D3-220ENST00000505307 TBC1D12O60347 775 aa24.54■■□□□ 1.52
UBE2D3-220ENST00000505307 CTNND1O60716 968 aaKnown RBP24.54■■□□□ 1.52
UBE2D3-220ENST00000505307 MCAMP43121 646 aa24.54■■□□□ 1.52
UBE2D3-220ENST00000505307 PICALMQ13492 652 aa24.54■■□□□ 1.52
UBE2D3-220ENST00000505307 CCDC158Q5M9N0 1113 aa24.54■■□□□ 1.52
UBE2D3-220ENST00000505307 FASTKD5Q7L8L6 764 aaKnown RBP24.54■■□□□ 1.52
UBE2D3-220ENST00000505307 LRP2BPQ9P2M1 347 aa24.54■■□□□ 1.52
UBE2D3-220ENST00000505307 SURF6O75683 361 aaKnown RBP24.53■■□□□ 1.52
UBE2D3-220ENST00000505307 TNNI3KQ59H18 835 aa24.53■■□□□ 1.52
UBE2D3-220ENST00000505307 PRPF38BQ5VTL8 546 aaKnown RBP24.53■■□□□ 1.52
UBE2D3-220ENST00000505307 PI16Q6UXB8 463 aa24.53■■□□□ 1.52
UBE2D3-220ENST00000505307 TBC1D9Q6ZT07 1266 aa24.53■■□□□ 1.52
UBE2D3-220ENST00000505307 ITPRIPQ8IWB1 547 aa24.53■■□□□ 1.52
UBE2D3-220ENST00000505307 ZNF384Q8TF68 577 aa24.53■■□□□ 1.52
UBE2D3-220ENST00000505307 ZHX2Q9Y6X8 837 aa24.53■■□□□ 1.52
UBE2D3-220ENST00000505307 FPGT-TNNI3KV9GXZ4 949 aa24.53■■□□□ 1.52
UBE2D3-220ENST00000505307 HTTP42858 3142 aa24.53■■□□□ 1.52
UBE2D3-220ENST00000505307 DOCK2Q92608 1830 aa24.52■■□□□ 1.52
UBE2D3-220ENST00000505307 ZBTB7BO15156 539 aaPredicted RBP24.52■■□□□ 1.52
UBE2D3-220ENST00000505307 PTPRAP18433 802 aa24.52■■□□□ 1.52
UBE2D3-220ENST00000505307 MOGSQ13724 837 aa24.52■■□□□ 1.52
UBE2D3-220ENST00000505307 SLC9C1Q4G0N8 1177 aa24.52■■□□□ 1.52
UBE2D3-220ENST00000505307 TTC39AQ5SRH9 613 aa24.52■■□□□ 1.52
UBE2D3-220ENST00000505307 PARK7Q99497 189 aaKnown RBP24.52■■□□□ 1.52
UBE2D3-220ENST00000505307 NOL10Q9BSC4 688 aaKnown RBP24.52■■□□□ 1.52
UBE2D3-220ENST00000505307 TMEM106CQ9BVX2 250 aa24.52■■□□□ 1.52
UBE2D3-220ENST00000505307 NOP58Q9Y2X3 529 aaKnown RBP24.52■■□□□ 1.52
UBE2D3-220ENST00000505307 PTCH2Q9Y6C5 1203 aa24.52■■□□□ 1.52
UBE2D3-220ENST00000505307 ZBED9Q6R2W3 1325 aa24.52■■□□□ 1.52
UBE2D3-220ENST00000505307 SLC34A2O95436 690 aa24.51■■□□□ 1.51
UBE2D3-220ENST00000505307 ZNF333Q96JL9 665 aa24.51■■□□□ 1.51
UBE2D3-220ENST00000505307 ZNF512BQ96KM6 892 aaPredicted RBP24.51■■□□□ 1.51
UBE2D3-220ENST00000505307 COL2A1P02458 1487 aaPredicted RBP24.51■■□□□ 1.51
UBE2D3-220ENST00000505307 A0A0G2JLL6 359 aaPredicted RBP24.5■■□□□ 1.51
UBE2D3-220ENST00000505307 POTEFA5A3E0 1075 aa24.5■■□□□ 1.51
UBE2D3-220ENST00000505307 HOXD10P28358 340 aa24.5■■□□□ 1.51
UBE2D3-220ENST00000505307 PRRT2Q7Z6L0 340 aaPredicted RBP24.5■■□□□ 1.51
UBE2D3-220ENST00000505307 AFG3L2Q9Y4W6 797 aa24.5■■□□□ 1.51
UBE2D3-220ENST00000505307 BAG3O95817 575 aa24.49■■□□□ 1.51
UBE2D3-220ENST00000505307 PLCG2P16885 1265 aa24.49■■□□□ 1.51
UBE2D3-220ENST00000505307 GPAT2Q6NUI2 795 aa24.49■■□□□ 1.51
UBE2D3-220ENST00000505307 CPA4Q9UI42 421 aa24.49■■□□□ 1.51
UBE2D3-220ENST00000505307 SLC45A1Q9Y2W3 748 aa24.49■■□□□ 1.51
UBE2D3-220ENST00000505307 ADGRA2Q96PE1 1338 aa24.49■■□□□ 1.51
UBE2D3-220ENST00000505307 RLBP1P12271 317 aa24.48■■□□□ 1.51
UBE2D3-220ENST00000505307 KIAA0100Q14667 2235 aaKnown RBP24.48■■□□□ 1.51
UBE2D3-220ENST00000505307 DBNDD2Q9BQY9 259 aa24.48■■□□□ 1.51
UBE2D3-220ENST00000505307 ARHGAP39Q9C0H5 1083 aa24.48■■□□□ 1.51
UBE2D3-220ENST00000505307 OSBPL5Q9H0X9 879 aaPredicted RBP24.48■■□□□ 1.51
UBE2D3-220ENST00000505307 C1orf115Q9H7X2 142 aa24.48■■□□□ 1.51
UBE2D3-220ENST00000505307 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.48■■□□□ 1.51
UBE2D3-220ENST00000505307 MS4A1P11836 297 aa24.47■■□□□ 1.51
UBE2D3-220ENST00000505307 PSMC4P43686 418 aa24.47■■□□□ 1.51
UBE2D3-220ENST00000505307 NAA16Q6N069 864 aaPredicted RBP24.47■■□□□ 1.51
UBE2D3-220ENST00000505307 TEX11Q8IYF3 940 aa24.47■■□□□ 1.51
UBE2D3-220ENST00000505307 TBC1D2Q9BYX2 928 aa24.47■■□□□ 1.51
UBE2D3-220ENST00000505307 PPP4CP60510 307 aa24.46■■□□□ 1.51
UBE2D3-220ENST00000505307 DHX36Q9H2U1 1008 aaKnown RBP24.46■■□□□ 1.51
UBE2D3-220ENST00000505307 SNRKQ9NRH2 765 aa24.46■■□□□ 1.51
UBE2D3-220ENST00000505307 SRRDQ9UH36 339 aa24.46■■□□□ 1.51
UBE2D3-220ENST00000505307 HERC5Q9UII4 1024 aaKnown RBP24.46■■□□□ 1.51
UBE2D3-220ENST00000505307 RBBP6Q7Z6E9 1792 aaKnown RBP24.46■■□□□ 1.51
UBE2D3-220ENST00000505307 FMNL1O95466 1100 aaPredicted RBP24.44■■□□□ 1.5
UBE2D3-220ENST00000505307 BCRP11274 1271 aa24.44■■□□□ 1.5
UBE2D3-220ENST00000505307 GADL1Q6ZQY3 521 aa24.44■■□□□ 1.5
UBE2D3-220ENST00000505307 TRIM47Q96LD4 638 aa24.44■■□□□ 1.5
UBE2D3-220ENST00000505307 PI4KBQ9UBF8 816 aa24.44■■□□□ 1.5
UBE2D3-220ENST00000505307 ECM2O94769 699 aaPredicted RBP24.43■■□□□ 1.5
UBE2D3-220ENST00000505307 CYP2E1P05181 493 aaPredicted RBP24.43■■□□□ 1.5
UBE2D3-220ENST00000505307 SLC4A8Q2Y0W8 1093 aa24.43■■□□□ 1.5
UBE2D3-220ENST00000505307 CEP85Q6P2H3 762 aa24.43■■□□□ 1.5
UBE2D3-220ENST00000505307 ERC1Q8IUD2 1116 aa24.43■■□□□ 1.5
UBE2D3-220ENST00000505307 SH3RF3Q8TEJ3 882 aaPredicted RBP24.43■■□□□ 1.5
UBE2D3-220ENST00000505307 DBNLQ9UJU6 430 aaKnown RBP24.43■■□□□ 1.5
UBE2D3-220ENST00000505307 DOCK1Q14185 1865 aa24.43■■□□□ 1.5
UBE2D3-220ENST00000505307 TRIM75PA6NK02 468 aa24.42■■□□□ 1.5
UBE2D3-220ENST00000505307 CYP2C8P10632 490 aa24.42■■□□□ 1.5
UBE2D3-220ENST00000505307 EN2P19622 333 aaPredicted RBP24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 83.1 ms