RNA–Protein interactions for RNA: ENST00000504327.1

PDLIM1P4-201, Transcript of PDZ and LIM domain 1 pseudogene 4, humanhuman

BASIC

Gene PDLIM1P4, Length 1,006 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P4-201ENST00000504327 TAGLNQ01995 201 aaKnown RBP6.48□□□□□ -1.37
PDLIM1P4-201ENST00000504327 FBXO33Q7Z6M2 555 aa6.48□□□□□ -1.37
PDLIM1P4-201ENST00000504327 ANKRD24Q8TF21 1146 aa6.48□□□□□ -1.37
PDLIM1P4-201ENST00000504327 ACSBG1Q96GR2 724 aa6.48□□□□□ -1.37
PDLIM1P4-201ENST00000504327 FAM161BQ96MY7 647 aa6.48□□□□□ -1.37
PDLIM1P4-201ENST00000504327 TBC1D32Q96NH3 1257 aa6.48□□□□□ -1.37
PDLIM1P4-201ENST00000504327 LGR6Q9HBX8 967 aa6.48□□□□□ -1.37
PDLIM1P4-201ENST00000504327 PARP2Q9UGN5 583 aa6.48□□□□□ -1.37
PDLIM1P4-201ENST00000504327 AK5Q9Y6K8 562 aa6.48□□□□□ -1.37
PDLIM1P4-201ENST00000504327 HNRNPUQ00839 825 aaKnown RBP eCLIP6.47□□□□□ -1.37
PDLIM1P4-201ENST00000504327 MAP7Q14244 749 aa6.47□□□□□ -1.37
PDLIM1P4-201ENST00000504327 TTLL4Q14679 1199 aa6.47□□□□□ -1.37
PDLIM1P4-201ENST00000504327 PCNX4Q63HM2 1172 aa6.47□□□□□ -1.37
PDLIM1P4-201ENST00000504327 LLGL2Q6P1M3 1020 aa6.47□□□□□ -1.37
PDLIM1P4-201ENST00000504327 ATXN3LQ9H3M9 355 aa6.47□□□□□ -1.37
PDLIM1P4-201ENST00000504327 PIDD1Q9HB75 910 aa6.47□□□□□ -1.37
PDLIM1P4-201ENST00000504327 DISC1Q9NRI5 854 aa6.47□□□□□ -1.37
PDLIM1P4-201ENST00000504327 PCMTD2Q9NV79 361 aa6.47□□□□□ -1.37
PDLIM1P4-201ENST00000504327 SAMM50Q9Y512 469 aa6.47□□□□□ -1.37
PDLIM1P4-201ENST00000504327 FGD1P98174 961 aa6.46□□□□□ -1.38
PDLIM1P4-201ENST00000504327 PSMD2Q13200 908 aa6.46□□□□□ -1.38
PDLIM1P4-201ENST00000504327 MEI1Q5TIA1 1274 aa6.46□□□□□ -1.38
PDLIM1P4-201ENST00000504327 ZAR1Q86SH2 424 aa6.46□□□□□ -1.38
PDLIM1P4-201ENST00000504327 GATA6Q92908 595 aa6.46□□□□□ -1.38
PDLIM1P4-201ENST00000504327 ATG3Q9NT62 314 aa6.46□□□□□ -1.38
PDLIM1P4-201ENST00000504327 BICRAQ9NZM4 1560 aa6.46□□□□□ -1.38
PDLIM1P4-201ENST00000504327 FAM170BA6NMN3 283 aa6.45□□□□□ -1.38
PDLIM1P4-201ENST00000504327 COBLO75128 1261 aa6.45□□□□□ -1.38
PDLIM1P4-201ENST00000504327 NEFMP07197 916 aa6.45□□□□□ -1.38
PDLIM1P4-201ENST00000504327 HCLS1P14317 486 aaPredicted RBP6.45□□□□□ -1.38
PDLIM1P4-201ENST00000504327 HOXA10P31260 410 aaPredicted RBP6.45□□□□□ -1.38
PDLIM1P4-201ENST00000504327 DAB2P98082 770 aa6.45□□□□□ -1.38
PDLIM1P4-201ENST00000504327 CCDC85BQ15834 202 aaPredicted RBP6.45□□□□□ -1.38
PDLIM1P4-201ENST00000504327 ZC3H12AQ5D1E8 599 aaKnown RBP6.45□□□□□ -1.38
PDLIM1P4-201ENST00000504327 SEZ6L2Q6UXD5 910 aa6.45□□□□□ -1.38
PDLIM1P4-201ENST00000504327 SV2BQ7L1I2 683 aa6.45□□□□□ -1.38
PDLIM1P4-201ENST00000504327 OSBPL1AQ9BXW6 950 aa6.45□□□□□ -1.38
PDLIM1P4-201ENST00000504327 C1GALT1Q9NS00 363 aa6.45□□□□□ -1.38
PDLIM1P4-201ENST00000504327 CACNA2D2Q9NY47 1150 aa6.45□□□□□ -1.38
PDLIM1P4-201ENST00000504327 CSADQ9Y600 493 aa6.45□□□□□ -1.38
PDLIM1P4-201ENST00000504327 RNGTTO60942 597 aaKnown RBP6.44□□□□□ -1.38
PDLIM1P4-201ENST00000504327 TRIM37O94972 964 aa6.44□□□□□ -1.38
PDLIM1P4-201ENST00000504327 GRIK1P39086 918 aa6.44□□□□□ -1.38
PDLIM1P4-201ENST00000504327 XPCQ01831 940 aaPredicted RBP6.44□□□□□ -1.38
PDLIM1P4-201ENST00000504327 CDK5R2Q13319 367 aa6.44□□□□□ -1.38
PDLIM1P4-201ENST00000504327 LRRC14Q15048 493 aa6.44□□□□□ -1.38
PDLIM1P4-201ENST00000504327 SMYD4Q8IYR2 804 aaPredicted RBP6.44□□□□□ -1.38
PDLIM1P4-201ENST00000504327 GIMAP7Q8NHV1 300 aa6.44□□□□□ -1.38
PDLIM1P4-201ENST00000504327 PIM2Q9P1W9 311 aa6.44□□□□□ -1.38
PDLIM1P4-201ENST00000504327 LEMD3Q9Y2U8 911 aa6.44□□□□□ -1.38
PDLIM1P4-201ENST00000504327 SCRIBQ14160 1630 aa6.43□□□□□ -1.38
PDLIM1P4-201ENST00000504327 KIAA1324LA8MWY0 1029 aaPredicted RBP6.43□□□□□ -1.38
PDLIM1P4-201ENST00000504327 DCDC2CA8MYV0 355 aa6.43□□□□□ -1.38
PDLIM1P4-201ENST00000504327 CTSHP09668 335 aa6.43□□□□□ -1.38
PDLIM1P4-201ENST00000504327 ERVK-24P63145 666 aa6.43□□□□□ -1.38
PDLIM1P4-201ENST00000504327 MAP3K11Q16584 847 aa6.43□□□□□ -1.38
PDLIM1P4-201ENST00000504327 TTBK2Q6IQ55 1244 aa6.43□□□□□ -1.38
PDLIM1P4-201ENST00000504327 ZNF765Q7L2R6 523 aa6.43□□□□□ -1.38
PDLIM1P4-201ENST00000504327 TMC4Q7Z404 712 aa6.43□□□□□ -1.38
PDLIM1P4-201ENST00000504327 NBPF11Q86T75 865 aa6.43□□□□□ -1.38
PDLIM1P4-201ENST00000504327 GAL3ST3Q96A11 431 aa6.43□□□□□ -1.38
PDLIM1P4-201ENST00000504327 ISL2Q96A47 359 aa6.43□□□□□ -1.38
PDLIM1P4-201ENST00000504327 ZNF428Q96B54 188 aa6.43□□□□□ -1.38
PDLIM1P4-201ENST00000504327 PCDHA4Q9UN74 947 aa6.43□□□□□ -1.38
PDLIM1P4-201ENST00000504327 ERCC3P19447 782 aa6.42□□□□□ -1.38
PDLIM1P4-201ENST00000504327 SPINK2P20155 84 aa6.42□□□□□ -1.38
PDLIM1P4-201ENST00000504327 PTPN11Q06124 597 aaPredicted RBP6.42□□□□□ -1.38
PDLIM1P4-201ENST00000504327 PPM1JQ5JR12 505 aa6.42□□□□□ -1.38
PDLIM1P4-201ENST00000504327 INTS5Q6P9B9 1019 aaKnown RBP6.42□□□□□ -1.38
PDLIM1P4-201ENST00000504327 METTL22Q9BUU2 404 aaPredicted RBP6.42□□□□□ -1.38
PDLIM1P4-201ENST00000504327 CYP8B1Q9UNU6 501 aa6.42□□□□□ -1.38
PDLIM1P4-201ENST00000504327 FOSL1P15407 271 aa6.41□□□□□ -1.38
PDLIM1P4-201ENST00000504327 NTF4P34130 210 aa6.41□□□□□ -1.38
PDLIM1P4-201ENST00000504327 CPSF6Q16630 551 aaKnown RBP eCLIP6.41□□□□□ -1.38
PDLIM1P4-201ENST00000504327 PDZRN4Q6ZMN7 1036 aaPredicted RBP6.41□□□□□ -1.38
PDLIM1P4-201ENST00000504327 UBE3DQ7Z6J8 389 aa6.41□□□□□ -1.38
PDLIM1P4-201ENST00000504327 C12orf40Q86WS4 652 aa6.41□□□□□ -1.38
PDLIM1P4-201ENST00000504327 RNF214Q8ND24 703 aa6.41□□□□□ -1.38
PDLIM1P4-201ENST00000504327 FAM87AP0C7U9 286 aa6.4□□□□□ -1.38
PDLIM1P4-201ENST00000504327 LIG3P49916 1009 aa6.4□□□□□ -1.38
PDLIM1P4-201ENST00000504327 SEPT6Q14141 434 aa6.4□□□□□ -1.38
PDLIM1P4-201ENST00000504327 INPP5AQ14642 412 aa6.4□□□□□ -1.38
PDLIM1P4-201ENST00000504327 MSMPQ1L6U9 139 aa6.4□□□□□ -1.38
PDLIM1P4-201ENST00000504327 LRFN4Q6PJG9 635 aa6.4□□□□□ -1.38
PDLIM1P4-201ENST00000504327 DTX1Q86Y01 620 aa6.4□□□□□ -1.38
PDLIM1P4-201ENST00000504327 ELMO3Q96BJ8 720 aa6.4□□□□□ -1.38
PDLIM1P4-201ENST00000504327 LRRC4CQ9HCJ2 640 aa6.4□□□□□ -1.38
PDLIM1P4-201ENST00000504327 MRS2Q9HD23 443 aa6.4□□□□□ -1.38
PDLIM1P4-201ENST00000504327 SSU72Q9NP77 194 aaKnown RBP6.4□□□□□ -1.38
PDLIM1P4-201ENST00000504327 PICK1Q9NRD5 415 aa6.4□□□□□ -1.38
PDLIM1P4-201ENST00000504327 VTI1BQ9UEU0 232 aa6.4□□□□□ -1.38
PDLIM1P4-201ENST00000504327 PCOLCE2Q9UKZ9 415 aa6.4□□□□□ -1.38
PDLIM1P4-201ENST00000504327 PCDHB5Q9Y5E4 795 aa6.4□□□□□ -1.38
PDLIM1P4-201ENST00000504327 PRAMEF27A3QJZ7 478 aa6.39□□□□□ -1.39
PDLIM1P4-201ENST00000504327 CYP26A1O43174 497 aa6.39□□□□□ -1.39
PDLIM1P4-201ENST00000504327 SORBS3O60504 671 aa6.39□□□□□ -1.39
PDLIM1P4-201ENST00000504327 ADAMTS4O75173 837 aa6.39□□□□□ -1.39
PDLIM1P4-201ENST00000504327 CDK8P49336 464 aa6.39□□□□□ -1.39
PDLIM1P4-201ENST00000504327 CYP27A1Q02318 531 aa6.39□□□□□ -1.39
PDLIM1P4-201ENST00000504327 WIPI1Q5MNZ9 446 aaPredicted RBP6.39□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms